RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
PMS1-212ENST00000432292 ITGAEP38570 1179 aa24.03■■□□□ 1.44
PMS1-212ENST00000432292 BCL11AQ9H165 835 aa23.99■■□□□ 1.43
PMS1-212ENST00000432292 PDS5BQ9NTI5 1447 aa23.98■■□□□ 1.43
PMS1-212ENST00000432292 LAMC3Q9Y6N6 1575 aa23.98■■□□□ 1.43
PMS1-212ENST00000432292 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
PMS1-212ENST00000432292 FHOD3Q2V2M9 1422 aa23.87■■□□□ 1.41
PMS1-212ENST00000432292 KIF21AQ7Z4S6 1674 aa23.85■■□□□ 1.41
PMS1-212ENST00000432292 ANP32EQ9BTT0 268 aa23.82■■□□□ 1.4
PMS1-212ENST00000432292 GAPVD1Q14C86 1478 aa23.81■■□□□ 1.4
PMS1-212ENST00000432292 SUPT16HQ9Y5B9 1047 aaKnown RBP23.78■■□□□ 1.4
PMS1-212ENST00000432292 FAM50AQ14320 339 aaKnown RBP23.75■■□□□ 1.39
PMS1-212ENST00000432292 CCNB3Q8WWL7 1395 aa23.75■■□□□ 1.39
PMS1-212ENST00000432292 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.391e-9■■■■□ 22.4
PMS1-212ENST00000432292 TSHZ2Q9NRE2 1034 aa23.73■■□□□ 1.39
PMS1-212ENST00000432292 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
PMS1-212ENST00000432292 RRBP1Q9P2E9 1410 aaKnown RBP23.68■■□□□ 1.38
PMS1-212ENST00000432292 TIAM1Q13009 1591 aa23.68■■□□□ 1.38
PMS1-212ENST00000432292 CUL7Q14999 1698 aa23.67■■□□□ 1.38
PMS1-212ENST00000432292 PCF11O94913 1555 aaKnown RBP23.66■■□□□ 1.38
PMS1-212ENST00000432292 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
PMS1-212ENST00000432292 ARID3CA6NKF2 412 aa23.65■■□□□ 1.38
PMS1-212ENST00000432292 LRRC9Q6ZRR7 1453 aa23.65■■□□□ 1.38
PMS1-212ENST00000432292 WDR97A6NE52 1622 aa23.65■■□□□ 1.38
PMS1-212ENST00000432292 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.37
PMS1-212ENST00000432292 DHX57Q6P158 1386 aaKnown RBP23.61■■□□□ 1.37
PMS1-212ENST00000432292 MRC2Q9UBG0 1479 aa23.6■■□□□ 1.37
PMS1-212ENST00000432292 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
PMS1-212ENST00000432292 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
PMS1-212ENST00000432292 BCANQ96GW7 911 aa23.56■■□□□ 1.36
PMS1-212ENST00000432292 CTTNBP2Q8WZ74 1663 aa23.56■■□□□ 1.36
PMS1-212ENST00000432292 CASKIN1Q8WXD9 1431 aa23.53■■□□□ 1.36
PMS1-212ENST00000432292 ERCC6Q03468 1493 aa23.53■■□□□ 1.36
PMS1-212ENST00000432292 EFCAB5A4FU69 1503 aa23.52■■□□□ 1.36
PMS1-212ENST00000432292 FMN1Q68DA7 1419 aa23.51■■□□□ 1.35
PMS1-212ENST00000432292 MTUS2Q5JR59 1369 aa23.5■■□□□ 1.35
PMS1-212ENST00000432292 FBLN2P98095 1184 aa23.5■■□□□ 1.35
PMS1-212ENST00000432292 MAP3K1Q13233 1512 aa23.5■■□□□ 1.35
PMS1-212ENST00000432292 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
PMS1-212ENST00000432292 FYCO1Q9BQS8 1478 aa23.49■■□□□ 1.35
PMS1-212ENST00000432292 GRIN2BQ13224 1484 aa23.42■■□□□ 1.34
PMS1-212ENST00000432292 SNAPC4Q5SXM2 1469 aa23.42■■□□□ 1.34
PMS1-212ENST00000432292 CFAP43Q8NDM7 1665 aa23.41■■□□□ 1.34
PMS1-212ENST00000432292 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
PMS1-212ENST00000432292 SETD5Q9C0A6 1442 aa23.37■■□□□ 1.33
PMS1-212ENST00000432292 CLSPNQ9HAW4 1339 aa23.37■■□□□ 1.33
PMS1-212ENST00000432292 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
PMS1-212ENST00000432292 SAMD9Q5K651 1589 aa23.36■■□□□ 1.33
PMS1-212ENST00000432292 CHMP7Q8WUX9 453 aaPredicted RBP23.35■■□□□ 1.33
PMS1-212ENST00000432292 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
PMS1-212ENST00000432292 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
PMS1-212ENST00000432292 WDR62O43379 1518 aa23.32■■□□□ 1.32
PMS1-212ENST00000432292 IQGAP2Q13576 1575 aa23.31■■□□□ 1.32
PMS1-212ENST00000432292 FGD6Q6ZV73 1430 aa23.3■■□□□ 1.32
PMS1-212ENST00000432292 CHIC2Q9UKJ5 165 aa23.29■■□□□ 1.32
PMS1-212ENST00000432292 LRRIQ1Q96JM4 1722 aa23.27■■□□□ 1.32
PMS1-212ENST00000432292 NCOA2Q15596 1464 aa23.27■■□□□ 1.32
PMS1-212ENST00000432292 KCNH8Q96L42 1107 aa23.26■■□□□ 1.31
PMS1-212ENST00000432292 FKBP8Q14318 412 aa23.24■■□□□ 1.31
PMS1-212ENST00000432292 CDK13Q14004 1512 aaKnown RBP23.23■■□□□ 1.31
PMS1-212ENST00000432292 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
PMS1-212ENST00000432292 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
PMS1-212ENST00000432292 PTPRKQ15262 1439 aa23.22■■□□□ 1.31
PMS1-212ENST00000432292 MAGI3Q5TCQ9 1506 aa23.21■■□□□ 1.31
PMS1-212ENST00000432292 MAPKBP1O60336 1514 aa23.19■■□□□ 1.3
PMS1-212ENST00000432292 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
PMS1-212ENST00000432292 MYOM3Q5VTT5 1437 aa23.18■■□□□ 1.3
PMS1-212ENST00000432292 RBM19Q9Y4C8 960 aaKnown RBP23.18■■□□□ 1.3
PMS1-212ENST00000432292 EPRSP07814 1512 aaKnown RBP23.16■■□□□ 1.3
PMS1-212ENST00000432292 KIAA0586Q9BVV6 1533 aa23.16■■□□□ 1.3
PMS1-212ENST00000432292 THOC2Q8NI27 1593 aaKnown RBP23.13■■□□□ 1.29
PMS1-212ENST00000432292 DISP1Q96F81 1524 aa23.11■■□□□ 1.29
PMS1-212ENST00000432292 JPH4Q96JJ6 628 aa23.11■■□□□ 1.29
PMS1-212ENST00000432292 EHBP1L1Q8N3D4 1523 aa23.11■■□□□ 1.29
PMS1-212ENST00000432292 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
PMS1-212ENST00000432292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.1■■□□□ 1.29
PMS1-212ENST00000432292 UGGT2Q9NYU1 1516 aa23.1■■□□□ 1.29
PMS1-212ENST00000432292 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
PMS1-212ENST00000432292 CCDC18Q5T9S5 1454 aa23.09■■□□□ 1.29
PMS1-212ENST00000432292 HECW1Q76N89 1606 aa23.08■■□□□ 1.29
PMS1-212ENST00000432292 ZNF644Q9H582 1327 aaPredicted RBP23.07■■□□□ 1.28
PMS1-212ENST00000432292 TRIM52Q96A61 297 aa23.07■■□□□ 1.28
PMS1-212ENST00000432292 PRKCSHP14314 528 aaPredicted RBP23.05■■□□□ 1.28
PMS1-212ENST00000432292 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
PMS1-212ENST00000432292 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
PMS1-212ENST00000432292 KIAA0556O60303 1618 aa23.03■■□□□ 1.28
PMS1-212ENST00000432292 PTPN23Q9H3S7 1636 aa23.02■■□□□ 1.28
PMS1-212ENST00000432292 ZNF777Q9ULD5 760 aaPredicted RBP23.02■■□□□ 1.28
PMS1-212ENST00000432292 NAIPQ13075 1403 aa23.02■■□□□ 1.28
PMS1-212ENST00000432292 PLB1Q6P1J6 1458 aa23.02■■□□□ 1.28
PMS1-212ENST00000432292 CEP170Q5SW79 1584 aa23.01■■□□□ 1.27
PMS1-212ENST00000432292 HFM1A2PYH4 1435 aa23■■□□□ 1.27
PMS1-212ENST00000432292 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
PMS1-212ENST00000432292 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
PMS1-212ENST00000432292 MSH5O43196 834 aa22.99■■□□□ 1.27
PMS1-212ENST00000432292 NEFLP07196 543 aa22.99■■□□□ 1.27
PMS1-212ENST00000432292 PRG4Q92954 1404 aaPredicted RBP22.97■■□□□ 1.27
PMS1-212ENST00000432292 ARHGEF11O15085 1522 aa22.96■■□□□ 1.27
PMS1-212ENST00000432292 FOXD1Q16676 465 aa22.95■■□□□ 1.27
PMS1-212ENST00000432292 ERICH6Q7L0X2 663 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms