RNA–Protein interactions for RNA: ENST00000431329.5

GAPVD1-208, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-208ENST00000431329 CUL7Q14999 1698 aa10.42□□□□□ -0.74
GAPVD1-208ENST00000431329 ABCA5Q8WWZ7 1642 aa10.41□□□□□ -0.74
GAPVD1-208ENST00000431329 GAPVD1Q14C86 1478 aa10.41□□□□□ -0.74
GAPVD1-208ENST00000431329 TIAM1Q13009 1591 aa10.4□□□□□ -0.74
GAPVD1-208ENST00000431329 SCAF1Q9H7N4 1312 aaKnown RBP10.38□□□□□ -0.75
GAPVD1-208ENST00000431329 AQRO60306 1485 aaKnown RBP eCLIP10.38□□□□□ -0.751e-6■■□□□ 12.3
GAPVD1-208ENST00000431329 TARBP1Q13395 1621 aaKnown RBP10.38□□□□□ -0.75
GAPVD1-208ENST00000431329 DIEXFQ68CQ4 756 aaKnown RBP10.37□□□□□ -0.75
GAPVD1-208ENST00000431329 CCNB3Q8WWL7 1395 aa10.36□□□□□ -0.75
GAPVD1-208ENST00000431329 AEBP2Q6ZN18 517 aaPredicted RBP10.36□□□□□ -0.75
GAPVD1-208ENST00000431329 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
GAPVD1-208ENST00000431329 PBRM1Q86U86 1689 aa10.35□□□□□ -0.75
GAPVD1-208ENST00000431329 PHLDB1Q86UU1 1377 aa10.35□□□□□ -0.75
GAPVD1-208ENST00000431329 LRRC9Q6ZRR7 1453 aa10.35□□□□□ -0.75
GAPVD1-208ENST00000431329 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
GAPVD1-208ENST00000431329 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
GAPVD1-208ENST00000431329 FHAD1B1AJZ9 1412 aa10.34□□□□□ -0.75
GAPVD1-208ENST00000431329 MRC2Q9UBG0 1479 aa10.33□□□□□ -0.76
GAPVD1-208ENST00000431329 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
GAPVD1-208ENST00000431329 ARID3CA6NKF2 412 aa10.33□□□□□ -0.76
GAPVD1-208ENST00000431329 DHX57Q6P158 1386 aaKnown RBP10.32□□□□□ -0.76
GAPVD1-208ENST00000431329 LRRIQ1Q96JM4 1722 aa10.32□□□□□ -0.76
GAPVD1-208ENST00000431329 EFCAB5A4FU69 1503 aa10.31□□□□□ -0.76
GAPVD1-208ENST00000431329 MYT1Q01538 1121 aa10.31□□□□□ -0.76
GAPVD1-208ENST00000431329 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
GAPVD1-208ENST00000431329 NEUROD1Q13562 356 aa10.29□□□□□ -0.76
GAPVD1-208ENST00000431329 ERCC6Q03468 1493 aa10.29□□□□□ -0.76
GAPVD1-208ENST00000431329 CASKIN1Q8WXD9 1431 aa10.29□□□□□ -0.76
GAPVD1-208ENST00000431329 DAXXQ9UER7 740 aaPredicted RBP10.29□□□□□ -0.76
GAPVD1-208ENST00000431329 SAMD9Q5K651 1589 aa10.28□□□□□ -0.76
GAPVD1-208ENST00000431329 SNAPC4Q5SXM2 1469 aa10.28□□□□□ -0.76
GAPVD1-208ENST00000431329 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
GAPVD1-208ENST00000431329 MAP3K1Q13233 1512 aa10.28□□□□□ -0.76
GAPVD1-208ENST00000431329 ADAMTS12P58397 1594 aa10.27□□□□□ -0.76
GAPVD1-208ENST00000431329 ACIN1Q9UKV3 1341 aaKnown RBP10.27□□□□□ -0.77
GAPVD1-208ENST00000431329 RAB3GAP2Q9H2M9 1393 aa10.27□□□□□ -0.77
GAPVD1-208ENST00000431329 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
GAPVD1-208ENST00000431329 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
GAPVD1-208ENST00000431329 WDR62O43379 1518 aa10.24□□□□□ -0.77
GAPVD1-208ENST00000431329 PRKCSHP14314 528 aaPredicted RBP10.24□□□□□ -0.77
GAPVD1-208ENST00000431329 GRIN2BQ13224 1484 aa10.24□□□□□ -0.77
GAPVD1-208ENST00000431329 EIF4G3O43432 1585 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-208ENST00000431329 IQGAP2Q13576 1575 aa10.24□□□□□ -0.77
GAPVD1-208ENST00000431329 FBLN2P98095 1184 aa10.23□□□□□ -0.77
GAPVD1-208ENST00000431329 IFT140Q96RY7 1462 aa10.22□□□□□ -0.77
GAPVD1-208ENST00000431329 MAGI3Q5TCQ9 1506 aa10.21□□□□□ -0.78
GAPVD1-208ENST00000431329 CDK13Q14004 1512 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-208ENST00000431329 THOC2Q8NI27 1593 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-208ENST00000431329 SETD5Q9C0A6 1442 aa10.2□□□□□ -0.78
GAPVD1-208ENST00000431329 CENPBP07199 599 aaPredicted RBP10.2□□□□□ -0.78
GAPVD1-208ENST00000431329 PELP1Q8IZL8 1130 aaKnown RBP10.2□□□□□ -0.78
GAPVD1-208ENST00000431329 MAPKBP1O60336 1514 aa10.19□□□□□ -0.78
GAPVD1-208ENST00000431329 YTHDC1Q96MU7 727 aaKnown RBP10.19□□□□□ -0.78
GAPVD1-208ENST00000431329 FGD6Q6ZV73 1430 aa10.19□□□□□ -0.78
GAPVD1-208ENST00000431329 NCOA2Q15596 1464 aa10.19□□□□□ -0.78
GAPVD1-208ENST00000431329 SIN3AQ96ST3 1273 aa10.18□□□□□ -0.78
GAPVD1-208ENST00000431329 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
GAPVD1-208ENST00000431329 MIER1Q8N108 512 aa10.17□□□□□ -0.78
GAPVD1-208ENST00000431329 SUPT6HQ7KZ85 1726 aaKnown RBP10.17□□□□□ -0.78
GAPVD1-208ENST00000431329 PTPRKQ15262 1439 aa10.17□□□□□ -0.78
GAPVD1-208ENST00000431329 CHIC2Q9UKJ5 165 aa10.15□□□□□ -0.78
GAPVD1-208ENST00000431329 HECW1Q76N89 1606 aa10.15□□□□□ -0.78
GAPVD1-208ENST00000431329 GRIN2AQ12879 1464 aa10.15□□□□□ -0.78
GAPVD1-208ENST00000431329 CLSPNQ9HAW4 1339 aa10.15□□□□□ -0.79
GAPVD1-208ENST00000431329 EHBP1L1Q8N3D4 1523 aa10.14□□□□□ -0.79
GAPVD1-208ENST00000431329 CHMP7Q8WUX9 453 aaPredicted RBP10.14□□□□□ -0.79
GAPVD1-208ENST00000431329 EPRSP07814 1512 aaKnown RBP10.14□□□□□ -0.79
GAPVD1-208ENST00000431329 MYOM3Q5VTT5 1437 aa10.14□□□□□ -0.79
GAPVD1-208ENST00000431329 KIAA0556O60303 1618 aa10.13□□□□□ -0.79
GAPVD1-208ENST00000431329 DISP1Q96F81 1524 aa10.13□□□□□ -0.79
GAPVD1-208ENST00000431329 CEP170Q5SW79 1584 aa10.13□□□□□ -0.79
GAPVD1-208ENST00000431329 PTPN23Q9H3S7 1636 aa10.13□□□□□ -0.79
GAPVD1-208ENST00000431329 UGGT2Q9NYU1 1516 aa10.12□□□□□ -0.79
GAPVD1-208ENST00000431329 RRP7BPQ9NSQ0 103 aa10.12□□□□□ -0.79
GAPVD1-208ENST00000431329 KIAA0586Q9BVV6 1533 aa10.11□□□□□ -0.79
GAPVD1-208ENST00000431329 CCDC18Q5T9S5 1454 aa10.11□□□□□ -0.79
GAPVD1-208ENST00000431329 HIRIP3Q9BW71 556 aaPredicted RBP10.09□□□□□ -0.79
GAPVD1-208ENST00000431329 SYNJ2O15056 1496 aa10.08□□□□□ -0.8
GAPVD1-208ENST00000431329 NUP153P49790 1475 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-208ENST00000431329 MAGI1Q96QZ7 1491 aaPredicted RBP10.08□□□□□ -0.8
GAPVD1-208ENST00000431329 ARHGEF11O15085 1522 aa10.08□□□□□ -0.8
GAPVD1-208ENST00000431329 RAPGEF6Q8TEU7 1601 aa10.08□□□□□ -0.8
GAPVD1-208ENST00000431329 PLB1Q6P1J6 1458 aa10.07□□□□□ -0.8
GAPVD1-208ENST00000431329 ZNF644Q9H582 1327 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-208ENST00000431329 KDM6BO15054 1643 aa10.07□□□□□ -0.8
GAPVD1-208ENST00000431329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.06□□□□□ -0.8
GAPVD1-208ENST00000431329 NAIPQ13075 1403 aa10.06□□□□□ -0.8
GAPVD1-208ENST00000431329 HFM1A2PYH4 1435 aa10.05□□□□□ -0.8
GAPVD1-208ENST00000431329 PRG4Q92954 1404 aaPredicted RBP10.04□□□□□ -0.8
GAPVD1-208ENST00000431329 TRIM52Q96A61 297 aa10.03□□□□□ -0.8
GAPVD1-208ENST00000431329 JPH4Q96JJ6 628 aa10.03□□□□□ -0.8
GAPVD1-208ENST00000431329 FOXD1Q16676 465 aa10.02□□□□□ -0.8
GAPVD1-208ENST00000431329 ZNF777Q9ULD5 760 aaPredicted RBP10.02□□□□□ -0.8
GAPVD1-208ENST00000431329 KIF14Q15058 1648 aa10.02□□□□□ -0.81
GAPVD1-208ENST00000431329 TCOF1Q13428 1488 aaKnown RBP10.01□□□□□ -0.81
GAPVD1-208ENST00000431329 UACAQ9BZF9 1416 aa10.01□□□□□ -0.81
GAPVD1-208ENST00000431329 NUP160Q12769 1436 aa10□□□□□ -0.81
GAPVD1-208ENST00000431329 GCC2Q8IWJ2 1684 aa10□□□□□ -0.81
GAPVD1-208ENST00000431329 PLPPR3Q6T4P5 718 aa10□□□□□ -0.81
GAPVD1-208ENST00000431329 ERICH6Q7L0X2 663 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms