RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
HIPK2-203ENST00000428878 YTHDC1Q96MU7 727 aaKnown RBP16.22■□□□□ 0.19
HIPK2-203ENST00000428878 FHOD3Q2V2M9 1422 aa16.18■□□□□ 0.18
HIPK2-203ENST00000428878 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
HIPK2-203ENST00000428878 KIF21BO75037 1637 aa16.15■□□□□ 0.18
HIPK2-203ENST00000428878 TARBP1Q13395 1621 aaKnown RBP16.15■□□□□ 0.18
HIPK2-203ENST00000428878 POLR3GLQ9BT43 218 aa16.15■□□□□ 0.18
HIPK2-203ENST00000428878 RRP7BPQ9NSQ0 103 aa16.15■□□□□ 0.18
HIPK2-203ENST00000428878 POLA1P09884 1462 aaPredicted RBP16.11■□□□□ 0.17
HIPK2-203ENST00000428878 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
HIPK2-203ENST00000428878 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
HIPK2-203ENST00000428878 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
HIPK2-203ENST00000428878 GAPVD1Q14C86 1478 aa16.07■□□□□ 0.16
HIPK2-203ENST00000428878 MRC2Q9UBG0 1479 aa16.07■□□□□ 0.16
HIPK2-203ENST00000428878 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
HIPK2-203ENST00000428878 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
HIPK2-203ENST00000428878 HIRIP3Q9BW71 556 aaPredicted RBP16.05■□□□□ 0.16
HIPK2-203ENST00000428878 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
HIPK2-203ENST00000428878 CDK11AQ9UQ88 783 aaPredicted RBP16.03■□□□□ 0.16
HIPK2-203ENST00000428878 JPH4Q96JJ6 628 aa16.02■□□□□ 0.16
HIPK2-203ENST00000428878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16■□□□□ 0.151e-9■■■■□ 21.5
HIPK2-203ENST00000428878 ERICH3Q5RHP9 1530 aa16■□□□□ 0.15
HIPK2-203ENST00000428878 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
HIPK2-203ENST00000428878 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
HIPK2-203ENST00000428878 PRXQ9BXM0 1461 aa15.96■□□□□ 0.15
HIPK2-203ENST00000428878 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
HIPK2-203ENST00000428878 ARAP1Q96P48 1450 aa15.95■□□□□ 0.14
HIPK2-203ENST00000428878 SIN3AQ96ST3 1273 aa15.94■□□□□ 0.14
HIPK2-203ENST00000428878 CHD1O14646 1710 aa15.93■□□□□ 0.14
HIPK2-203ENST00000428878 DIEXFQ68CQ4 756 aaKnown RBP15.93■□□□□ 0.14
HIPK2-203ENST00000428878 CFDP1Q9UEE9 299 aaPredicted RBP15.92■□□□□ 0.14
HIPK2-203ENST00000428878 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
HIPK2-203ENST00000428878 NPM1P06748 294 aaKnown RBP eCLIP15.9■□□□□ 0.14
HIPK2-203ENST00000428878 FOXD1Q16676 465 aa15.9■□□□□ 0.14
HIPK2-203ENST00000428878 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
HIPK2-203ENST00000428878 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
HIPK2-203ENST00000428878 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
HIPK2-203ENST00000428878 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
HIPK2-203ENST00000428878 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
HIPK2-203ENST00000428878 CCNB3Q8WWL7 1395 aa15.86■□□□□ 0.13
HIPK2-203ENST00000428878 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
HIPK2-203ENST00000428878 FHAD1B1AJZ9 1412 aa15.84■□□□□ 0.13
HIPK2-203ENST00000428878 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
HIPK2-203ENST00000428878 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
HIPK2-203ENST00000428878 SNAPC4Q5SXM2 1469 aa15.82■□□□□ 0.12
HIPK2-203ENST00000428878 TSPY4P0CV99 314 aa15.81■□□□□ 0.12
HIPK2-203ENST00000428878 TSPY10P0CW01 314 aa15.81■□□□□ 0.12
HIPK2-203ENST00000428878 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
HIPK2-203ENST00000428878 KDM2AQ9Y2K7 1162 aa15.8■□□□□ 0.12
HIPK2-203ENST00000428878 CUL7Q14999 1698 aa15.79■□□□□ 0.12
HIPK2-203ENST00000428878 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
HIPK2-203ENST00000428878 PBRM1Q86U86 1689 aa15.77■□□□□ 0.12
HIPK2-203ENST00000428878 HNRNPMP52272 730 aaKnown RBP eCLIP15.77■□□□□ 0.118e-7■■■■■ 40.2
HIPK2-203ENST00000428878 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
HIPK2-203ENST00000428878 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
HIPK2-203ENST00000428878 CHGAP10645 457 aaKnown RBP15.76■□□□□ 0.11
HIPK2-203ENST00000428878 FMN1Q68DA7 1419 aa15.75■□□□□ 0.11
HIPK2-203ENST00000428878 PHLDB1Q86UU1 1377 aa15.75■□□□□ 0.11
HIPK2-203ENST00000428878 SHROOM2Q13796 1616 aa15.74■□□□□ 0.11
HIPK2-203ENST00000428878 RGL3Q3MIN7 710 aa15.74■□□□□ 0.11
HIPK2-203ENST00000428878 CARMIL2Q6F5E8 1435 aa15.72■□□□□ 0.11
HIPK2-203ENST00000428878 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
HIPK2-203ENST00000428878 PTPRGP23470 1445 aa15.7■□□□□ 0.1
HIPK2-203ENST00000428878 DDX10Q13206 875 aaKnown RBP15.69■□□□□ 0.1
HIPK2-203ENST00000428878 RAB3GAP2Q9H2M9 1393 aa15.69■□□□□ 0.1
HIPK2-203ENST00000428878 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
HIPK2-203ENST00000428878 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
HIPK2-203ENST00000428878 SENP3-EIF4A1A0A087X0R7 540 aa15.67■□□□□ 0.1
HIPK2-203ENST00000428878 CTTNBP2Q8WZ74 1663 aa15.66■□□□□ 0.1
HIPK2-203ENST00000428878 PRG4Q92954 1404 aaPredicted RBP15.65■□□□□ 0.1
HIPK2-203ENST00000428878 MLECQ14165 292 aa15.61■□□□□ 0.09
HIPK2-203ENST00000428878 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
HIPK2-203ENST00000428878 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
HIPK2-203ENST00000428878 PLB1Q6P1J6 1458 aa15.58■□□□□ 0.09
HIPK2-203ENST00000428878 ARHGEF11O15085 1522 aa15.58■□□□□ 0.09
HIPK2-203ENST00000428878 LRRC9Q6ZRR7 1453 aa15.58■□□□□ 0.08
HIPK2-203ENST00000428878 MIER1Q8N108 512 aa15.58■□□□□ 0.08
HIPK2-203ENST00000428878 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
HIPK2-203ENST00000428878 SETD5Q9C0A6 1442 aa15.56■□□□□ 0.08
HIPK2-203ENST00000428878 CENPBP07199 599 aaPredicted RBP15.56■□□□□ 0.08
HIPK2-203ENST00000428878 KIF13AQ9H1H9 1805 aa15.55■□□□□ 0.08
HIPK2-203ENST00000428878 GGT6Q6P531 493 aa15.55■□□□□ 0.08
HIPK2-203ENST00000428878 GRIN2AQ12879 1464 aa15.54■□□□□ 0.08
HIPK2-203ENST00000428878 EFCAB5A4FU69 1503 aa15.54■□□□□ 0.08
HIPK2-203ENST00000428878 BCANQ96GW7 911 aa15.54■□□□□ 0.08
HIPK2-203ENST00000428878 PKD2Q13563 968 aa15.52■□□□□ 0.08
HIPK2-203ENST00000428878 CASKIN1Q8WXD9 1431 aa15.52■□□□□ 0.08
HIPK2-203ENST00000428878 SAMD9Q5K651 1589 aa15.51■□□□□ 0.07
HIPK2-203ENST00000428878 PCF11O94913 1555 aaKnown RBP15.51■□□□□ 0.07
HIPK2-203ENST00000428878 MPHOSPH9Q99550 1183 aa15.5■□□□□ 0.07
HIPK2-203ENST00000428878 AFAP1Q8N556 730 aa15.5■□□□□ 0.07
HIPK2-203ENST00000428878 NCOA2Q15596 1464 aa15.5■□□□□ 0.07
HIPK2-203ENST00000428878 DHX57Q6P158 1386 aaKnown RBP15.5■□□□□ 0.07
HIPK2-203ENST00000428878 MAP3K1Q13233 1512 aa15.49■□□□□ 0.07
HIPK2-203ENST00000428878 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
HIPK2-203ENST00000428878 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
HIPK2-203ENST00000428878 KIAA0586Q9BVV6 1533 aa15.47■□□□□ 0.07
HIPK2-203ENST00000428878 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
HIPK2-203ENST00000428878 IQGAP2Q13576 1575 aa15.47■□□□□ 0.07
HIPK2-203ENST00000428878 NUTM2DQ5VT03 806 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms