RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
LINC00963-204ENST00000427778 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
LINC00963-204ENST00000427778 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
LINC00963-204ENST00000427778 MAGI1Q96QZ7 1491 aaPredicted RBP15.5■□□□□ 0.07
LINC00963-204ENST00000427778 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
LINC00963-204ENST00000427778 GAPVD1Q14C86 1478 aa15.47■□□□□ 0.07
LINC00963-204ENST00000427778 KIF13AQ9H1H9 1805 aa15.47■□□□□ 0.07
LINC00963-204ENST00000427778 SYNJ2O15056 1496 aa15.43■□□□□ 0.06
LINC00963-204ENST00000427778 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
LINC00963-204ENST00000427778 CHMP7Q8WUX9 453 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-204ENST00000427778 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-204ENST00000427778 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
LINC00963-204ENST00000427778 ADAMTS12P58397 1594 aa15.37■□□□□ 0.05
LINC00963-204ENST00000427778 ERCC6L2Q5T890 1561 aa15.35■□□□□ 0.05
LINC00963-204ENST00000427778 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
LINC00963-204ENST00000427778 FHAD1B1AJZ9 1412 aa15.3■□□□□ 0.04
LINC00963-204ENST00000427778 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
LINC00963-204ENST00000427778 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
LINC00963-204ENST00000427778 NUP160Q12769 1436 aa15.26■□□□□ 0.03
LINC00963-204ENST00000427778 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
LINC00963-204ENST00000427778 CUL7Q14999 1698 aa15.25■□□□□ 0.03
LINC00963-204ENST00000427778 KDM6BO15054 1643 aa15.2■□□□□ 0.02
LINC00963-204ENST00000427778 ILDR1Q86SU0 546 aaPredicted RBP15.19■□□□□ 0.02
LINC00963-204ENST00000427778 IGF1RP08069 1367 aa15.19■□□□□ 0.02
LINC00963-204ENST00000427778 TSPOAP1O95153 1857 aa15.17■□□□□ 0.02
LINC00963-204ENST00000427778 DIP2BQ9P265 1576 aa15.17■□□□□ 0.02
LINC00963-204ENST00000427778 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
LINC00963-204ENST00000427778 MAPKBP1O60336 1514 aa15.12■□□□□ 0.01
LINC00963-204ENST00000427778 ABCC10Q5T3U5 1492 aa15.12■□□□□ 0.01
LINC00963-204ENST00000427778 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
LINC00963-204ENST00000427778 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
LINC00963-204ENST00000427778 KDM4FA0A1W2PPD8 638 aa15.07■□□□□ 0
LINC00963-204ENST00000427778 ADCY10Q96PN6 1610 aa15.06■□□□□ 0
LINC00963-204ENST00000427778 FAM69CQ0P6D2 419 aa15.03■□□□□ -0
LINC00963-204ENST00000427778 PRG4Q92954 1404 aaPredicted RBP15.02■□□□□ -0
LINC00963-204ENST00000427778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -0
LINC00963-204ENST00000427778 RAPGEF2Q9Y4G8 1499 aa15.01□□□□□ -0.01
LINC00963-204ENST00000427778 JPH4Q96JJ6 628 aa15□□□□□ -0.01
LINC00963-204ENST00000427778 IQGAP2Q13576 1575 aa14.99□□□□□ -0.01
LINC00963-204ENST00000427778 HECW2Q9P2P5 1572 aa14.99□□□□□ -0.01
LINC00963-204ENST00000427778 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
LINC00963-204ENST00000427778 PPRC1Q5VV67 1664 aaKnown RBP14.97□□□□□ -0.01
LINC00963-204ENST00000427778 CTTNBP2Q8WZ74 1663 aa14.97□□□□□ -0.01
LINC00963-204ENST00000427778 ADGRL1O94910 1474 aa14.96□□□□□ -0.01
LINC00963-204ENST00000427778 EEA1Q15075 1411 aa14.95□□□□□ -0.02
LINC00963-204ENST00000427778 NPM1P06748 294 aaKnown RBP eCLIP14.94□□□□□ -0.02
LINC00963-204ENST00000427778 UGGT2Q9NYU1 1516 aa14.92□□□□□ -0.02
LINC00963-204ENST00000427778 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
LINC00963-204ENST00000427778 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
LINC00963-204ENST00000427778 DISP1Q96F81 1524 aa14.88□□□□□ -0.03
LINC00963-204ENST00000427778 KIAA0556O60303 1618 aa14.85□□□□□ -0.03
LINC00963-204ENST00000427778 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
LINC00963-204ENST00000427778 GLI2P10070 1586 aa14.84□□□□□ -0.03
LINC00963-204ENST00000427778 TNIKQ9UKE5 1360 aa14.84□□□□□ -0.03
LINC00963-204ENST00000427778 KIF21BO75037 1637 aa14.83□□□□□ -0.04
LINC00963-204ENST00000427778 PTPRGP23470 1445 aa14.82□□□□□ -0.04
LINC00963-204ENST00000427778 MAP3K4Q9Y6R4 1608 aa14.81□□□□□ -0.04
LINC00963-204ENST00000427778 GOLGA3Q08378 1498 aa14.81□□□□□ -0.04
LINC00963-204ENST00000427778 UHRF1BP1LA0JNW5 1464 aa14.79□□□□□ -0.04
LINC00963-204ENST00000427778 ABCC2Q92887 1545 aa14.76□□□□□ -0.05
LINC00963-204ENST00000427778 POTEHQ6S545 545 aa14.76□□□□□ -0.05
LINC00963-204ENST00000427778 SAMD9Q5K651 1589 aa14.76□□□□□ -0.05
LINC00963-204ENST00000427778 PLB1Q6P1J6 1458 aa14.75□□□□□ -0.05
LINC00963-204ENST00000427778 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
LINC00963-204ENST00000427778 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
LINC00963-204ENST00000427778 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
LINC00963-204ENST00000427778 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.05
LINC00963-204ENST00000427778 COL17A1Q9UMD9 1497 aaPredicted RBP14.71□□□□□ -0.05
LINC00963-204ENST00000427778 ABCA8O94911 1581 aa14.7□□□□□ -0.06
LINC00963-204ENST00000427778 ZCCHC11Q5TAX3 1644 aaKnown RBP14.7□□□□□ -0.06
LINC00963-204ENST00000427778 FBXO41Q8TF61 875 aa14.69□□□□□ -0.06
LINC00963-204ENST00000427778 EPRSP07814 1512 aaKnown RBP14.67□□□□□ -0.06
LINC00963-204ENST00000427778 EFCAB5A4FU69 1503 aa14.66□□□□□ -0.06
LINC00963-204ENST00000427778 FAM9AQ8IZU1 332 aaPredicted RBP14.66□□□□□ -0.06
LINC00963-204ENST00000427778 CFAP43Q8NDM7 1665 aa14.64□□□□□ -0.07
LINC00963-204ENST00000427778 TTBK1Q5TCY1 1321 aaPredicted RBP14.62□□□□□ -0.07
LINC00963-204ENST00000427778 CAPN15O75808 1086 aa14.6□□□□□ -0.07
LINC00963-204ENST00000427778 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
LINC00963-204ENST00000427778 WDR7Q9Y4E6 1490 aa14.57□□□□□ -0.08
LINC00963-204ENST00000427778 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
LINC00963-204ENST00000427778 FHOD3Q2V2M9 1422 aa14.55□□□□□ -0.08
LINC00963-204ENST00000427778 LMTK3Q96Q04 1460 aa14.55□□□□□ -0.08
LINC00963-204ENST00000427778 ADAMTSL3P82987 1691 aa14.55□□□□□ -0.08
LINC00963-204ENST00000427778 ATP10BO94823 1461 aa14.53□□□□□ -0.08
LINC00963-204ENST00000427778 MAGI3Q5TCQ9 1506 aa14.52□□□□□ -0.08
LINC00963-204ENST00000427778 NUP153P49790 1475 aaKnown RBP14.52□□□□□ -0.08
LINC00963-204ENST00000427778 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
LINC00963-204ENST00000427778 DSG3P32926 999 aa14.52□□□□□ -0.09
LINC00963-204ENST00000427778 P3H3Q8IVL6 736 aa14.52□□□□□ -0.09
LINC00963-204ENST00000427778 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
LINC00963-204ENST00000427778 PCF11O94913 1555 aaKnown RBP14.51□□□□□ -0.09
LINC00963-204ENST00000427778 ARHGAP35Q9NRY4 1499 aa14.51□□□□□ -0.09
LINC00963-204ENST00000427778 BCORL1Q5H9F3 1711 aa14.49□□□□□ -0.09
LINC00963-204ENST00000427778 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
LINC00963-204ENST00000427778 PTPRMP28827 1452 aa14.49□□□□□ -0.09
LINC00963-204ENST00000427778 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
LINC00963-204ENST00000427778 MADDQ8WXG6 1647 aa14.48□□□□□ -0.09
LINC00963-204ENST00000427778 ABCA9Q8IUA7 1624 aa14.46□□□□□ -0.09
LINC00963-204ENST00000427778 CD109Q6YHK3 1445 aa14.46□□□□□ -0.09
LINC00963-204ENST00000427778 HECW1Q76N89 1606 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms