RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
VPS8-204ENST00000424463 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
VPS8-204ENST00000424463 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
VPS8-204ENST00000424463 PDS5BQ9NTI5 1447 aa12.65□□□□□ -0.38
VPS8-204ENST00000424463 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
VPS8-204ENST00000424463 ERICH3Q5RHP9 1530 aa12.65□□□□□ -0.38
VPS8-204ENST00000424463 POLA1P09884 1462 aaPredicted RBP12.64□□□□□ -0.39
VPS8-204ENST00000424463 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
VPS8-204ENST00000424463 PDE4CQ08493 712 aa12.63□□□□□ -0.39
VPS8-204ENST00000424463 CARMIL1Q5VZK9 1371 aa12.62□□□□□ -0.39
VPS8-204ENST00000424463 VPS8Q8N3P4 1428 aa12.59□□□□□ -0.39
VPS8-204ENST00000424463 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
VPS8-204ENST00000424463 TDRD9Q8NDG6 1382 aaKnown RBP12.57□□□□□ -0.4
VPS8-204ENST00000424463 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
VPS8-204ENST00000424463 NEFLP07196 543 aa12.56□□□□□ -0.4
VPS8-204ENST00000424463 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
VPS8-204ENST00000424463 ARHGAP35Q9NRY4 1499 aa12.51□□□□□ -0.41
VPS8-204ENST00000424463 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
VPS8-204ENST00000424463 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
VPS8-204ENST00000424463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
VPS8-204ENST00000424463 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
VPS8-204ENST00000424463 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
VPS8-204ENST00000424463 GAPVD1Q14C86 1478 aa12.47□□□□□ -0.41
VPS8-204ENST00000424463 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.41
VPS8-204ENST00000424463 FGD1P98174 961 aa12.45□□□□□ -0.42
VPS8-204ENST00000424463 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
VPS8-204ENST00000424463 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
VPS8-204ENST00000424463 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
VPS8-204ENST00000424463 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
VPS8-204ENST00000424463 AQRO60306 1485 aaKnown RBP eCLIP12.44□□□□□ -0.425e-6■■□□□ 14.3
VPS8-204ENST00000424463 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
VPS8-204ENST00000424463 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
VPS8-204ENST00000424463 ABCA5Q8WWZ7 1642 aa12.43□□□□□ -0.42
VPS8-204ENST00000424463 ZEB1P37275 1124 aaPredicted RBP12.43□□□□□ -0.42
VPS8-204ENST00000424463 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
VPS8-204ENST00000424463 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
VPS8-204ENST00000424463 CUL7Q14999 1698 aa12.41□□□□□ -0.42
VPS8-204ENST00000424463 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
VPS8-204ENST00000424463 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
VPS8-204ENST00000424463 ATP1B4Q9UN42 357 aaPredicted RBP12.39□□□□□ -0.43
VPS8-204ENST00000424463 ZNF608Q9ULD9 1512 aaPredicted RBP12.38□□□□□ -0.43
VPS8-204ENST00000424463 FHOD3Q2V2M9 1422 aa12.37□□□□□ -0.43
VPS8-204ENST00000424463 KCNA4P22459 653 aa12.37□□□□□ -0.43
VPS8-204ENST00000424463 CHMP4AQ9BY43 222 aa12.36□□□□□ -0.43
VPS8-204ENST00000424463 WDR62O43379 1518 aa12.35□□□□□ -0.43
VPS8-204ENST00000424463 CCDC136Q96JN2 1154 aa12.34□□□□□ -0.43
VPS8-204ENST00000424463 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
VPS8-204ENST00000424463 ERICH6BQ5W0A0 696 aa12.34□□□□□ -0.43
VPS8-204ENST00000424463 FHAD1B1AJZ9 1412 aa12.32□□□□□ -0.44
VPS8-204ENST00000424463 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
VPS8-204ENST00000424463 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
VPS8-204ENST00000424463 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
VPS8-204ENST00000424463 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
VPS8-204ENST00000424463 EFCAB5A4FU69 1503 aa12.28□□□□□ -0.44
VPS8-204ENST00000424463 PCF11O94913 1555 aaKnown RBP12.27□□□□□ -0.44
VPS8-204ENST00000424463 TIAM1Q13009 1591 aa12.27□□□□□ -0.44
VPS8-204ENST00000424463 THOC2Q8NI27 1593 aaKnown RBP12.27□□□□□ -0.44
VPS8-204ENST00000424463 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.44
VPS8-204ENST00000424463 DHX37Q8IY37 1157 aaKnown RBP12.27□□□□□ -0.44
VPS8-204ENST00000424463 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
VPS8-204ENST00000424463 ITGAEP38570 1179 aa12.26□□□□□ -0.45
VPS8-204ENST00000424463 AAMPQ13685 434 aa12.26□□□□□ -0.45
VPS8-204ENST00000424463 LRRC9Q6ZRR7 1453 aa12.26□□□□□ -0.45
VPS8-204ENST00000424463 CASKIN1Q8WXD9 1431 aa12.25□□□□□ -0.45
VPS8-204ENST00000424463 SNAPC4Q5SXM2 1469 aa12.25□□□□□ -0.45
VPS8-204ENST00000424463 MAP3K1Q13233 1512 aa12.24□□□□□ -0.45
VPS8-204ENST00000424463 BRD2P25440 801 aaKnown RBP12.24□□□□□ -0.45
VPS8-204ENST00000424463 FBLN2P98095 1184 aa12.24□□□□□ -0.45
VPS8-204ENST00000424463 RRBP1Q9P2E9 1410 aaKnown RBP12.24□□□□□ -0.45
VPS8-204ENST00000424463 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
VPS8-204ENST00000424463 CCNB3Q8WWL7 1395 aa12.23□□□□□ -0.45
VPS8-204ENST00000424463 TPRNQ4KMQ1 711 aa12.23□□□□□ -0.45
VPS8-204ENST00000424463 PHLDB1Q86UU1 1377 aa12.23□□□□□ -0.45
VPS8-204ENST00000424463 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
VPS8-204ENST00000424463 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
VPS8-204ENST00000424463 FYCO1Q9BQS8 1478 aa12.22□□□□□ -0.45
VPS8-204ENST00000424463 CHMP7Q8WUX9 453 aaPredicted RBP12.21□□□□□ -0.45
VPS8-204ENST00000424463 IQGAP2Q13576 1575 aa12.19□□□□□ -0.46
VPS8-204ENST00000424463 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
VPS8-204ENST00000424463 ARID3CA6NKF2 412 aa12.18□□□□□ -0.46
VPS8-204ENST00000424463 HAP1P54257 671 aaPredicted RBP12.18□□□□□ -0.46
VPS8-204ENST00000424463 FBXO3Q9UK99 471 aa12.18□□□□□ -0.46
VPS8-204ENST00000424463 GRIN2AQ12879 1464 aa12.18□□□□□ -0.46
VPS8-204ENST00000424463 CFAP43Q8NDM7 1665 aa12.17□□□□□ -0.46
VPS8-204ENST00000424463 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
VPS8-204ENST00000424463 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
VPS8-204ENST00000424463 MTUS2Q5JR59 1369 aa12.15□□□□□ -0.47
VPS8-204ENST00000424463 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
VPS8-204ENST00000424463 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
VPS8-204ENST00000424463 A0A0U1RQG5 324 aaPredicted RBP12.13□□□□□ -0.47
VPS8-204ENST00000424463 UGGT2Q9NYU1 1516 aa12.13□□□□□ -0.47
VPS8-204ENST00000424463 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
VPS8-204ENST00000424463 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
VPS8-204ENST00000424463 LRRIQ1Q96JM4 1722 aa12.12□□□□□ -0.47
VPS8-204ENST00000424463 DISP1Q96F81 1524 aa12.11□□□□□ -0.47
VPS8-204ENST00000424463 DHX57Q6P158 1386 aaKnown RBP12.1□□□□□ -0.47
VPS8-204ENST00000424463 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
VPS8-204ENST00000424463 CEP170Q5SW79 1584 aa12.1□□□□□ -0.47
VPS8-204ENST00000424463 RBM10P98175 930 aaKnown RBP12.1□□□□□ -0.47
VPS8-204ENST00000424463 BCANQ96GW7 911 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms