RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 GLIPR1L2Q4G1C9 344 aa18.82■□□□□ 0.6
SREBF2-202ENST00000424354 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
SREBF2-202ENST00000424354 DNMBPQ6XZF7 1577 aa18.77■□□□□ 0.6
SREBF2-202ENST00000424354 NEFMP07197 916 aa18.77■□□□□ 0.6
SREBF2-202ENST00000424354 HNRNPUQ00839 825 aaKnown RBP eCLIP18.72■□□□□ 0.592e-14■■□□□ 13.6
SREBF2-202ENST00000424354 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
SREBF2-202ENST00000424354 UPF2Q9HAU5 1272 aaKnown RBP18.7■□□□□ 0.58
SREBF2-202ENST00000424354 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
SREBF2-202ENST00000424354 NESP48681 1621 aa18.68■□□□□ 0.58
SREBF2-202ENST00000424354 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
SREBF2-202ENST00000424354 OSCARQ8IYS5 282 aa18.65■□□□□ 0.58
SREBF2-202ENST00000424354 TOPBP1Q92547 1522 aa18.63■□□□□ 0.57
SREBF2-202ENST00000424354 HSP90AA1P07900 732 aaKnown RBP18.63■□□□□ 0.57
SREBF2-202ENST00000424354 CARMIL2Q6F5E8 1435 aa18.63■□□□□ 0.57
SREBF2-202ENST00000424354 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
SREBF2-202ENST00000424354 PRDM2Q13029 1718 aa18.62■□□□□ 0.57
SREBF2-202ENST00000424354 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
SREBF2-202ENST00000424354 CCDC136Q96JN2 1154 aa18.61■□□□□ 0.57
SREBF2-202ENST00000424354 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
SREBF2-202ENST00000424354 ESF1Q9H501 851 aaKnown RBP18.61■□□□□ 0.57
SREBF2-202ENST00000424354 BCL11AQ9H165 835 aa18.6■□□□□ 0.57
SREBF2-202ENST00000424354 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
SREBF2-202ENST00000424354 NBR1Q14596 966 aa18.58■□□□□ 0.57
SREBF2-202ENST00000424354 WDR97A6NE52 1622 aa18.58■□□□□ 0.56
SREBF2-202ENST00000424354 FAM9BQ8IZU0 186 aa18.57■□□□□ 0.56
SREBF2-202ENST00000424354 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
SREBF2-202ENST00000424354 GAPVD1Q14C86 1478 aa18.57■□□□□ 0.56
SREBF2-202ENST00000424354 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
SREBF2-202ENST00000424354 GOLGA3Q08378 1498 aa18.54■□□□□ 0.56
SREBF2-202ENST00000424354 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.54■□□□□ 0.56
SREBF2-202ENST00000424354 ZNF777Q9ULD5 760 aaPredicted RBP18.53■□□□□ 0.56
SREBF2-202ENST00000424354 WDR62O43379 1518 aa18.52■□□□□ 0.55
SREBF2-202ENST00000424354 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
SREBF2-202ENST00000424354 MIER1Q8N108 512 aa18.5■□□□□ 0.55
SREBF2-202ENST00000424354 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
SREBF2-202ENST00000424354 TOP2BQ02880 1626 aa18.5■□□□□ 0.55
SREBF2-202ENST00000424354 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
SREBF2-202ENST00000424354 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
SREBF2-202ENST00000424354 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
SREBF2-202ENST00000424354 RAPGEF2Q9Y4G8 1499 aa18.44■□□□□ 0.54
SREBF2-202ENST00000424354 ANP32EQ9BTT0 268 aa18.44■□□□□ 0.54
SREBF2-202ENST00000424354 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
SREBF2-202ENST00000424354 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
SREBF2-202ENST00000424354 DDRGK1Q96HY6 314 aa18.42■□□□□ 0.54
SREBF2-202ENST00000424354 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
SREBF2-202ENST00000424354 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
SREBF2-202ENST00000424354 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
SREBF2-202ENST00000424354 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
SREBF2-202ENST00000424354 CUX1P39880 1505 aa18.37■□□□□ 0.53
SREBF2-202ENST00000424354 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
SREBF2-202ENST00000424354 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
SREBF2-202ENST00000424354 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.531e-7■■■■■ 35
SREBF2-202ENST00000424354 ERICH3Q5RHP9 1530 aa18.34■□□□□ 0.53
SREBF2-202ENST00000424354 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
SREBF2-202ENST00000424354 CHGAP10645 457 aaKnown RBP18.34■□□□□ 0.53
SREBF2-202ENST00000424354 BIVM-ERCC5R4GMW8 1640 aa18.33■□□□□ 0.53
SREBF2-202ENST00000424354 CUL7Q14999 1698 aa18.32■□□□□ 0.52
SREBF2-202ENST00000424354 BECN1Q14457 450 aa18.32■□□□□ 0.52
SREBF2-202ENST00000424354 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
SREBF2-202ENST00000424354 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
SREBF2-202ENST00000424354 ARXQ96QS3 562 aa18.3■□□□□ 0.52
SREBF2-202ENST00000424354 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.521e-7■■■■■ 42.5
SREBF2-202ENST00000424354 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
SREBF2-202ENST00000424354 CEP162Q5TB80 1403 aa18.27■□□□□ 0.52
SREBF2-202ENST00000424354 PLEKHD1A6NEE1 506 aa18.26■□□□□ 0.51
SREBF2-202ENST00000424354 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
SREBF2-202ENST00000424354 TRIM44Q96DX7 344 aaPredicted RBP18.25■□□□□ 0.51
SREBF2-202ENST00000424354 CLIP1P30622 1438 aa18.25■□□□□ 0.51
SREBF2-202ENST00000424354 TNIKQ9UKE5 1360 aa18.24■□□□□ 0.51
SREBF2-202ENST00000424354 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
SREBF2-202ENST00000424354 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
SREBF2-202ENST00000424354 FMN1Q68DA7 1419 aa18.21■□□□□ 0.51
SREBF2-202ENST00000424354 THOC2Q8NI27 1593 aaKnown RBP18.2■□□□□ 0.5
SREBF2-202ENST00000424354 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
SREBF2-202ENST00000424354 GOLGA6L22H0YM25 854 aa18.19■□□□□ 0.5
SREBF2-202ENST00000424354 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
SREBF2-202ENST00000424354 CHIC2Q9UKJ5 165 aa18.18■□□□□ 0.5
SREBF2-202ENST00000424354 IGF1RP08069 1367 aa18.18■□□□□ 0.5
SREBF2-202ENST00000424354 MTUS2Q5JR59 1369 aa18.15■□□□□ 0.5
SREBF2-202ENST00000424354 NCLP19338 710 aaKnown RBP18.14■□□□□ 0.49
SREBF2-202ENST00000424354 PTPRGP23470 1445 aa18.14■□□□□ 0.49
SREBF2-202ENST00000424354 TNNT2P45379 298 aaPredicted RBP18.14■□□□□ 0.49
SREBF2-202ENST00000424354 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
SREBF2-202ENST00000424354 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
SREBF2-202ENST00000424354 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
SREBF2-202ENST00000424354 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
SREBF2-202ENST00000424354 KIAA0586Q9BVV6 1533 aa18.11■□□□□ 0.49
SREBF2-202ENST00000424354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.491e-14■■■□□ 18.1
SREBF2-202ENST00000424354 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
SREBF2-202ENST00000424354 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
SREBF2-202ENST00000424354 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
SREBF2-202ENST00000424354 TSPY4P0CV99 314 aa18.08■□□□□ 0.49
SREBF2-202ENST00000424354 TSPY10P0CW01 314 aa18.08■□□□□ 0.49
SREBF2-202ENST00000424354 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
SREBF2-202ENST00000424354 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
SREBF2-202ENST00000424354 KIF21BO75037 1637 aa18.05■□□□□ 0.48
SREBF2-202ENST00000424354 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.47
SREBF2-202ENST00000424354 PTMAP06454 111 aaKnown RBP18.01■□□□□ 0.47
SREBF2-202ENST00000424354 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
SREBF2-202ENST00000424354 NAP1L5Q96NT1 182 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms