RNA–Protein interactions for RNA: ENST00000422105.5

VPS8-203, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 811 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-203ENST00000422105 CUX1P39880 1505 aa14.69□□□□□ -0.06
VPS8-203ENST00000422105 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
VPS8-203ENST00000422105 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
VPS8-203ENST00000422105 WRNQ14191 1432 aaPredicted RBP eCLIP14.66□□□□□ -0.06
VPS8-203ENST00000422105 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
VPS8-203ENST00000422105 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
VPS8-203ENST00000422105 SOGA1O94964 1423 aa14.63□□□□□ -0.07
VPS8-203ENST00000422105 PITPNM1O00562 1244 aa14.62□□□□□ -0.07
VPS8-203ENST00000422105 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
VPS8-203ENST00000422105 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
VPS8-203ENST00000422105 RAD54L2Q9Y4B4 1467 aa14.6□□□□□ -0.07
VPS8-203ENST00000422105 ZNF608Q9ULD9 1512 aaPredicted RBP14.59□□□□□ -0.07
VPS8-203ENST00000422105 TARBP1Q13395 1621 aaKnown RBP14.59□□□□□ -0.07
VPS8-203ENST00000422105 TOP2BQ02880 1626 aa14.58□□□□□ -0.08
VPS8-203ENST00000422105 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
VPS8-203ENST00000422105 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
VPS8-203ENST00000422105 TDRD9Q8NDG6 1382 aaKnown RBP14.54□□□□□ -0.08
VPS8-203ENST00000422105 AQRO60306 1485 aaKnown RBP eCLIP14.54□□□□□ -0.085e-6■■□□□ 14.3
VPS8-203ENST00000422105 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
VPS8-203ENST00000422105 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
VPS8-203ENST00000422105 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
VPS8-203ENST00000422105 SLC4A1APQ9BWU0 796 aaKnown RBP14.48□□□□□ -0.09
VPS8-203ENST00000422105 GAPVD1Q14C86 1478 aa14.45□□□□□ -0.1
VPS8-203ENST00000422105 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
VPS8-203ENST00000422105 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
VPS8-203ENST00000422105 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
VPS8-203ENST00000422105 ABCA5Q8WWZ7 1642 aa14.4□□□□□ -0.1
VPS8-203ENST00000422105 SNAPC4Q5SXM2 1469 aa14.39□□□□□ -0.11
VPS8-203ENST00000422105 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
VPS8-203ENST00000422105 EVX2Q03828 476 aa14.38□□□□□ -0.11
VPS8-203ENST00000422105 FBLN2P98095 1184 aa14.37□□□□□ -0.11
VPS8-203ENST00000422105 KIF27Q86VH2 1401 aa14.36□□□□□ -0.11
VPS8-203ENST00000422105 CHMP7Q8WUX9 453 aaPredicted RBP14.36□□□□□ -0.11
VPS8-203ENST00000422105 ERICH3Q5RHP9 1530 aa14.34□□□□□ -0.11
VPS8-203ENST00000422105 SYNJ2O15056 1496 aa14.33□□□□□ -0.12
VPS8-203ENST00000422105 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
VPS8-203ENST00000422105 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
VPS8-203ENST00000422105 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
VPS8-203ENST00000422105 PBRM1Q86U86 1689 aa14.32□□□□□ -0.12
VPS8-203ENST00000422105 IGF1RP08069 1367 aa14.31□□□□□ -0.12
VPS8-203ENST00000422105 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
VPS8-203ENST00000422105 ADAMTS12P58397 1594 aa14.26□□□□□ -0.13
VPS8-203ENST00000422105 CHD1O14646 1710 aa14.26□□□□□ -0.13
VPS8-203ENST00000422105 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
VPS8-203ENST00000422105 GRIN2AQ12879 1464 aa14.24□□□□□ -0.13
VPS8-203ENST00000422105 RUSC2Q8N2Y8 1516 aa14.22□□□□□ -0.13
VPS8-203ENST00000422105 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
VPS8-203ENST00000422105 CARMIL1Q5VZK9 1371 aa14.22□□□□□ -0.13
VPS8-203ENST00000422105 SPDYE1Q8NFV5 336 aaPredicted RBP14.21□□□□□ -0.13
VPS8-203ENST00000422105 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
VPS8-203ENST00000422105 NUP160Q12769 1436 aa14.19□□□□□ -0.14
VPS8-203ENST00000422105 CUL7Q14999 1698 aa14.19□□□□□ -0.14
VPS8-203ENST00000422105 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
VPS8-203ENST00000422105 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
VPS8-203ENST00000422105 EEA1Q15075 1411 aa14.15□□□□□ -0.14
VPS8-203ENST00000422105 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
VPS8-203ENST00000422105 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
VPS8-203ENST00000422105 ZBTB22O15209 634 aa14.13□□□□□ -0.15
VPS8-203ENST00000422105 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
VPS8-203ENST00000422105 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
VPS8-203ENST00000422105 PRXQ9BXM0 1461 aa14.1□□□□□ -0.15
VPS8-203ENST00000422105 GABBR2O75899 941 aa14.08□□□□□ -0.16
VPS8-203ENST00000422105 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
VPS8-203ENST00000422105 JPH4Q96JJ6 628 aa14.08□□□□□ -0.16
VPS8-203ENST00000422105 KIAA0586Q9BVV6 1533 aa14.08□□□□□ -0.16
VPS8-203ENST00000422105 RIMBP3CA6NJZ7 1639 aa14.07□□□□□ -0.16
VPS8-203ENST00000422105 RIMBP3BA6NNM3 1639 aa14.07□□□□□ -0.16
VPS8-203ENST00000422105 RIMBP3Q9UFD9 1639 aa14.07□□□□□ -0.16
VPS8-203ENST00000422105 LHX8Q68G74 356 aa14.06□□□□□ -0.16
VPS8-203ENST00000422105 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
VPS8-203ENST00000422105 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
VPS8-203ENST00000422105 SHROOM2Q13796 1616 aa14.02□□□□□ -0.16
VPS8-203ENST00000422105 PRG4Q92954 1404 aaPredicted RBP14.02□□□□□ -0.16
VPS8-203ENST00000422105 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
VPS8-203ENST00000422105 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
VPS8-203ENST00000422105 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
VPS8-203ENST00000422105 IQGAP2Q13576 1575 aa13.97□□□□□ -0.17
VPS8-203ENST00000422105 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.17
VPS8-203ENST00000422105 KIF21BO75037 1637 aa13.94□□□□□ -0.18
VPS8-203ENST00000422105 CARMIL2Q6F5E8 1435 aa13.94□□□□□ -0.18
VPS8-203ENST00000422105 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
VPS8-203ENST00000422105 UGGT2Q9NYU1 1516 aa13.92□□□□□ -0.18
VPS8-203ENST00000422105 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
VPS8-203ENST00000422105 GOLGA3Q08378 1498 aa13.9□□□□□ -0.18
VPS8-203ENST00000422105 TNIKQ9UKE5 1360 aa13.89□□□□□ -0.19
VPS8-203ENST00000422105 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
VPS8-203ENST00000422105 DISP1Q96F81 1524 aa13.89□□□□□ -0.19
VPS8-203ENST00000422105 CTTNBP2Q8WZ74 1663 aa13.88□□□□□ -0.19
VPS8-203ENST00000422105 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
VPS8-203ENST00000422105 PTPRGP23470 1445 aa13.88□□□□□ -0.19
VPS8-203ENST00000422105 KIAA0556O60303 1618 aa13.83□□□□□ -0.2
VPS8-203ENST00000422105 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
VPS8-203ENST00000422105 RANGAP1P46060 587 aaPredicted RBP13.81□□□□□ -0.2
VPS8-203ENST00000422105 P3H3Q8IVL6 736 aa13.8□□□□□ -0.2
VPS8-203ENST00000422105 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
VPS8-203ENST00000422105 UACAQ9BZF9 1416 aa13.78□□□□□ -0.2
VPS8-203ENST00000422105 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
VPS8-203ENST00000422105 SAMD9Q5K651 1589 aa13.77□□□□□ -0.21
VPS8-203ENST00000422105 UHRF1BP1LA0JNW5 1464 aa13.76□□□□□ -0.21
VPS8-203ENST00000422105 CLCN6P51797 869 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms