RNA–Protein interactions for RNA: ENST00000422105.5

VPS8-203, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 811 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-203ENST00000422105 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
VPS8-203ENST00000422105 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
VPS8-203ENST00000422105 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
VPS8-203ENST00000422105 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
VPS8-203ENST00000422105 FOXD1Q16676 465 aa21.59■■□□□ 1.05
VPS8-203ENST00000422105 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
VPS8-203ENST00000422105 MSH5O43196 834 aa20.49■□□□□ 0.87
VPS8-203ENST00000422105 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
VPS8-203ENST00000422105 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
VPS8-203ENST00000422105 PLPPR3Q6T4P5 718 aa19.85■□□□□ 0.77
VPS8-203ENST00000422105 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
VPS8-203ENST00000422105 ADRA2BP18089 450 aa19.66■□□□□ 0.74
VPS8-203ENST00000422105 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
VPS8-203ENST00000422105 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
VPS8-203ENST00000422105 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
VPS8-203ENST00000422105 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
VPS8-203ENST00000422105 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
VPS8-203ENST00000422105 ABCC9O60706 1549 aa17.57■□□□□ 0.4
VPS8-203ENST00000422105 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
VPS8-203ENST00000422105 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
VPS8-203ENST00000422105 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
VPS8-203ENST00000422105 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
VPS8-203ENST00000422105 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
VPS8-203ENST00000422105 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
VPS8-203ENST00000422105 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
VPS8-203ENST00000422105 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
VPS8-203ENST00000422105 ZCCHC6Q5VYS8 1495 aaKnown RBP16.96■□□□□ 0.31
VPS8-203ENST00000422105 NACADO15069 1562 aa16.94■□□□□ 0.3
VPS8-203ENST00000422105 RB1CC1Q8TDY2 1594 aa16.93■□□□□ 0.3
VPS8-203ENST00000422105 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
VPS8-203ENST00000422105 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
VPS8-203ENST00000422105 DCAF1Q9Y4B6 1507 aa16.85■□□□□ 0.29
VPS8-203ENST00000422105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.24
VPS8-203ENST00000422105 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
VPS8-203ENST00000422105 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
VPS8-203ENST00000422105 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
VPS8-203ENST00000422105 SCRIBQ14160 1630 aa16.43■□□□□ 0.22
VPS8-203ENST00000422105 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
VPS8-203ENST00000422105 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
VPS8-203ENST00000422105 POTEHQ6S545 545 aa16.26■□□□□ 0.19
VPS8-203ENST00000422105 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
VPS8-203ENST00000422105 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
VPS8-203ENST00000422105 CAPN15O75808 1086 aa16.09■□□□□ 0.17
VPS8-203ENST00000422105 DSG3P32926 999 aa16.09■□□□□ 0.17
VPS8-203ENST00000422105 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
VPS8-203ENST00000422105 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
VPS8-203ENST00000422105 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
VPS8-203ENST00000422105 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
VPS8-203ENST00000422105 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
VPS8-203ENST00000422105 SMARCA4P51532 1647 aa15.73■□□□□ 0.11
VPS8-203ENST00000422105 APLP2Q06481 763 aa15.72■□□□□ 0.11
VPS8-203ENST00000422105 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
VPS8-203ENST00000422105 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
VPS8-203ENST00000422105 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
VPS8-203ENST00000422105 ATAD2BQ9ULI0 1458 aa15.67■□□□□ 0.1
VPS8-203ENST00000422105 NCAPD3P42695 1498 aa15.66■□□□□ 0.1
VPS8-203ENST00000422105 ABCB7O75027 752 aa15.64■□□□□ 0.09
VPS8-203ENST00000422105 SMARCA2P51531 1590 aa15.64■□□□□ 0.09
VPS8-203ENST00000422105 SLC4A2P04920 1241 aa15.61■□□□□ 0.09
VPS8-203ENST00000422105 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
VPS8-203ENST00000422105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
VPS8-203ENST00000422105 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
VPS8-203ENST00000422105 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
VPS8-203ENST00000422105 HMGXB3Q12766 1538 aa15.56■□□□□ 0.08
VPS8-203ENST00000422105 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
VPS8-203ENST00000422105 WIZO95785 1651 aa15.47■□□□□ 0.07
VPS8-203ENST00000422105 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
VPS8-203ENST00000422105 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
VPS8-203ENST00000422105 KCNA4P22459 653 aa15.41■□□□□ 0.06
VPS8-203ENST00000422105 TOP2AP11388 1531 aaKnown RBP15.34■□□□□ 0.05
VPS8-203ENST00000422105 CHRDL2Q6WN34 429 aa15.27■□□□□ 0.04
VPS8-203ENST00000422105 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
VPS8-203ENST00000422105 CADPSQ9ULU8 1353 aa15.23■□□□□ 0.03
VPS8-203ENST00000422105 NESP48681 1621 aa15.21■□□□□ 0.03
VPS8-203ENST00000422105 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
VPS8-203ENST00000422105 CCDC88BA6NC98 1476 aa15.19■□□□□ 0.02
VPS8-203ENST00000422105 ERCC6Q03468 1493 aa15.15■□□□□ 0.02
VPS8-203ENST00000422105 POLA2Q14181 598 aa15.14■□□□□ 0.01
VPS8-203ENST00000422105 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
VPS8-203ENST00000422105 CFTRP13569 1480 aa15.14■□□□□ 0.01
VPS8-203ENST00000422105 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
VPS8-203ENST00000422105 FANCD2Q9BXW9 1451 aa15.02■□□□□ -0
VPS8-203ENST00000422105 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
VPS8-203ENST00000422105 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
VPS8-203ENST00000422105 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
VPS8-203ENST00000422105 CUX2O14529 1486 aa14.96□□□□□ -0.01
VPS8-203ENST00000422105 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
VPS8-203ENST00000422105 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
VPS8-203ENST00000422105 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
VPS8-203ENST00000422105 PRDM2Q13029 1718 aa14.89□□□□□ -0.03
VPS8-203ENST00000422105 WDR62O43379 1518 aa14.88□□□□□ -0.03
VPS8-203ENST00000422105 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
VPS8-203ENST00000422105 URB2Q14146 1524 aaKnown RBP14.85□□□□□ -0.03
VPS8-203ENST00000422105 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
VPS8-203ENST00000422105 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
VPS8-203ENST00000422105 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
VPS8-203ENST00000422105 REM2Q8IYK8 340 aaPredicted RBP14.77□□□□□ -0.05
VPS8-203ENST00000422105 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
VPS8-203ENST00000422105 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
VPS8-203ENST00000422105 HAX1O00165 279 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 247.8 ms