RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 CARMIL1Q5VZK9 1371 aa22.84■■□□□ 1.25
TRIM13-204ENST00000420995 LRRC9Q6ZRR7 1453 aa22.84■■□□□ 1.25
TRIM13-204ENST00000420995 SETD5Q9C0A6 1442 aa22.83■■□□□ 1.25
TRIM13-204ENST00000420995 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
TRIM13-204ENST00000420995 FAM50AQ14320 339 aaKnown RBP22.81■■□□□ 1.24
TRIM13-204ENST00000420995 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
TRIM13-204ENST00000420995 NESP48681 1621 aa22.8■■□□□ 1.24
TRIM13-204ENST00000420995 SIN3AQ96ST3 1273 aa22.8■■□□□ 1.24
TRIM13-204ENST00000420995 P3H3Q8IVL6 736 aa22.78■■□□□ 1.24
TRIM13-204ENST00000420995 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
TRIM13-204ENST00000420995 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
TRIM13-204ENST00000420995 DDX10Q13206 875 aaKnown RBP22.74■■□□□ 1.23
TRIM13-204ENST00000420995 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
TRIM13-204ENST00000420995 FHAD1B1AJZ9 1412 aa22.71■■□□□ 1.23
TRIM13-204ENST00000420995 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
TRIM13-204ENST00000420995 TSHZ2Q9NRE2 1034 aa22.69■■□□□ 1.22
TRIM13-204ENST00000420995 DNAJC5BQ9UF47 199 aa22.69■■□□□ 1.22
TRIM13-204ENST00000420995 CFAP43Q8NDM7 1665 aa22.67■■□□□ 1.22
TRIM13-204ENST00000420995 FHOD3Q2V2M9 1422 aa22.66■■□□□ 1.22
TRIM13-204ENST00000420995 HIRIP3Q9BW71 556 aaPredicted RBP22.65■■□□□ 1.22
TRIM13-204ENST00000420995 TOPBP1Q92547 1522 aa22.64■■□□□ 1.21
TRIM13-204ENST00000420995 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
TRIM13-204ENST00000420995 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
TRIM13-204ENST00000420995 BCANQ96GW7 911 aa22.62■■□□□ 1.21
TRIM13-204ENST00000420995 PPP1R15AO75807 674 aaPredicted RBP22.61■■□□□ 1.21
TRIM13-204ENST00000420995 FYCO1Q9BQS8 1478 aa22.56■■□□□ 1.2
TRIM13-204ENST00000420995 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
TRIM13-204ENST00000420995 FKBP8Q14318 412 aa22.55■■□□□ 1.2
TRIM13-204ENST00000420995 TIMELESSQ9UNS1 1208 aa22.55■■□□□ 1.2
TRIM13-204ENST00000420995 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
TRIM13-204ENST00000420995 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.2
TRIM13-204ENST00000420995 TRIM52Q96A61 297 aa22.49■■□□□ 1.19
TRIM13-204ENST00000420995 EFCAB5A4FU69 1503 aa22.49■■□□□ 1.19
TRIM13-204ENST00000420995 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
TRIM13-204ENST00000420995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.48■■□□□ 1.19
TRIM13-204ENST00000420995 FGD6Q6ZV73 1430 aa22.47■■□□□ 1.19
TRIM13-204ENST00000420995 ANP32CO43423 234 aa22.46■■□□□ 1.19
TRIM13-204ENST00000420995 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.196e-15■■■■■ 98.7
TRIM13-204ENST00000420995 TONSLQ96HA7 1378 aa22.44■■□□□ 1.18
TRIM13-204ENST00000420995 CCDC18Q5T9S5 1454 aa22.43■■□□□ 1.18
TRIM13-204ENST00000420995 CCER2I3L3R5 266 aa22.43■■□□□ 1.18
TRIM13-204ENST00000420995 PTPRKQ15262 1439 aa22.43■■□□□ 1.18
TRIM13-204ENST00000420995 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
TRIM13-204ENST00000420995 MTUS2Q5JR59 1369 aa22.41■■□□□ 1.18
TRIM13-204ENST00000420995 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
TRIM13-204ENST00000420995 FMN1Q68DA7 1419 aa22.4■■□□□ 1.18
TRIM13-204ENST00000420995 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
TRIM13-204ENST00000420995 HFM1A2PYH4 1435 aa22.38■■□□□ 1.17
TRIM13-204ENST00000420995 CTTNBP2Q8WZ74 1663 aa22.38■■□□□ 1.17
TRIM13-204ENST00000420995 NEFLP07196 543 aa22.37■■□□□ 1.17
TRIM13-204ENST00000420995 CUL7Q14999 1698 aa22.37■■□□□ 1.17
TRIM13-204ENST00000420995 UACAQ9BZF9 1416 aa22.36■■□□□ 1.17
TRIM13-204ENST00000420995 ANP32EQ9BTT0 268 aa22.35■■□□□ 1.17
TRIM13-204ENST00000420995 PTPN23Q9H3S7 1636 aa22.34■■□□□ 1.17
TRIM13-204ENST00000420995 PDS5BQ9NTI5 1447 aa22.34■■□□□ 1.17
TRIM13-204ENST00000420995 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
TRIM13-204ENST00000420995 NAIPQ13075 1403 aa22.32■■□□□ 1.16
TRIM13-204ENST00000420995 NCOA2Q15596 1464 aa22.3■■□□□ 1.16
TRIM13-204ENST00000420995 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
TRIM13-204ENST00000420995 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
TRIM13-204ENST00000420995 LRRIQ1Q96JM4 1722 aa22.27■■□□□ 1.16
TRIM13-204ENST00000420995 KDM5BQ9UGL1 1544 aa22.25■■□□□ 1.15
TRIM13-204ENST00000420995 SAMD9Q5K651 1589 aa22.24■■□□□ 1.15
TRIM13-204ENST00000420995 GRIN2BQ13224 1484 aa22.24■■□□□ 1.15
TRIM13-204ENST00000420995 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
TRIM13-204ENST00000420995 RRP7BPQ9NSQ0 103 aa22.21■■□□□ 1.15
TRIM13-204ENST00000420995 TARBP1Q13395 1621 aaKnown RBP22.21■■□□□ 1.15
TRIM13-204ENST00000420995 CHIC2Q9UKJ5 165 aa22.2■■□□□ 1.14
TRIM13-204ENST00000420995 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
TRIM13-204ENST00000420995 SUPT6HQ7KZ85 1726 aaKnown RBP22.18■■□□□ 1.14
TRIM13-204ENST00000420995 EHBP1L1Q8N3D4 1523 aa22.18■■□□□ 1.14
TRIM13-204ENST00000420995 MAGI3Q5TCQ9 1506 aa22.16■■□□□ 1.14
TRIM13-204ENST00000420995 WASHC2AQ641Q2 1341 aa22.16■■□□□ 1.14
TRIM13-204ENST00000420995 HSPA5P11021 654 aaKnown RBP22.15■■□□□ 1.14
TRIM13-204ENST00000420995 UGGT2Q9NYU1 1516 aa22.15■■□□□ 1.14
TRIM13-204ENST00000420995 THOC2Q8NI27 1593 aaKnown RBP22.14■■□□□ 1.13
TRIM13-204ENST00000420995 DENND4BO75064 1496 aaPredicted RBP22.13■■□□□ 1.13
TRIM13-204ENST00000420995 IRX6P78412 446 aaPredicted RBP22.12■■□□□ 1.13
TRIM13-204ENST00000420995 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
TRIM13-204ENST00000420995 PBRM1Q86U86 1689 aa22.08■■□□□ 1.12
TRIM13-204ENST00000420995 KDM6BO15054 1643 aa22.07■■□□□ 1.12
TRIM13-204ENST00000420995 TCOF1Q13428 1488 aaKnown RBP22.05■■□□□ 1.12
TRIM13-204ENST00000420995 EIF4G2P78344 907 aaKnown RBP eCLIP22.05■■□□□ 1.12
TRIM13-204ENST00000420995 FOXD1Q16676 465 aa22.05■■□□□ 1.12
TRIM13-204ENST00000420995 HECW1Q76N89 1606 aa22.04■■□□□ 1.12
TRIM13-204ENST00000420995 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
TRIM13-204ENST00000420995 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
TRIM13-204ENST00000420995 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
TRIM13-204ENST00000420995 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
TRIM13-204ENST00000420995 MPHOSPH9Q99550 1183 aa22.02■■□□□ 1.12
TRIM13-204ENST00000420995 L3MBTL2Q969R5 705 aa22.02■■□□□ 1.12
TRIM13-204ENST00000420995 C11orf95C9JLR9 678 aaPredicted RBP22■■□□□ 1.11
TRIM13-204ENST00000420995 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
TRIM13-204ENST00000420995 CNTLNQ9NXG0 1405 aa21.99■■□□□ 1.11
TRIM13-204ENST00000420995 CDK13Q14004 1512 aaKnown RBP21.99■■□□□ 1.11
TRIM13-204ENST00000420995 EPRSP07814 1512 aaKnown RBP21.98■■□□□ 1.11
TRIM13-204ENST00000420995 AKNAQ7Z591 1439 aa21.98■■□□□ 1.11
TRIM13-204ENST00000420995 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
TRIM13-204ENST00000420995 MSH5O43196 834 aa21.96■■□□□ 1.11
TRIM13-204ENST00000420995 IQGAP2Q13576 1575 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms