RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
TRIM13-204ENST00000420995 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
TRIM13-204ENST00000420995 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
TRIM13-204ENST00000420995 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
TRIM13-204ENST00000420995 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
TRIM13-204ENST00000420995 MYO15BQ96JP2 1530 aa26.73■■□□□ 1.87
TRIM13-204ENST00000420995 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
TRIM13-204ENST00000420995 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
TRIM13-204ENST00000420995 HRCP23327 699 aa26.41■■□□□ 1.82
TRIM13-204ENST00000420995 DCAF1Q9Y4B6 1507 aa26.25■■□□□ 1.79
TRIM13-204ENST00000420995 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
TRIM13-204ENST00000420995 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
TRIM13-204ENST00000420995 PPARGC1BQ86YN6 1023 aaKnown RBP25.93■■□□□ 1.74
TRIM13-204ENST00000420995 ABCC9O60706 1549 aa25.73■■□□□ 1.71
TRIM13-204ENST00000420995 SCRIBQ14160 1630 aa25.68■■□□□ 1.7
TRIM13-204ENST00000420995 TRIM26Q12899 539 aaPredicted RBP25.58■■□□□ 1.69
TRIM13-204ENST00000420995 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
TRIM13-204ENST00000420995 TRIM41Q8WV44 630 aa25.39■■□□□ 1.65
TRIM13-204ENST00000420995 RB1CC1Q8TDY2 1594 aa25.37■■□□□ 1.65
TRIM13-204ENST00000420995 NACADO15069 1562 aa25.33■■□□□ 1.64
TRIM13-204ENST00000420995 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
TRIM13-204ENST00000420995 EHMT2Q96KQ7 1210 aa25.16■■□□□ 1.62
TRIM13-204ENST00000420995 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
TRIM13-204ENST00000420995 ZEB1P37275 1124 aaPredicted RBP25.08■■□□□ 1.61
TRIM13-204ENST00000420995 MROH2BQ7Z745 1585 aa25■■□□□ 1.59
TRIM13-204ENST00000420995 WIZO95785 1651 aa24.88■■□□□ 1.57
TRIM13-204ENST00000420995 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
TRIM13-204ENST00000420995 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
TRIM13-204ENST00000420995 EIF4G1Q04637 1599 aaKnown RBP24.65■■□□□ 1.54
TRIM13-204ENST00000420995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.6■■□□□ 1.53
TRIM13-204ENST00000420995 SCAF1Q9H7N4 1312 aaKnown RBP24.58■■□□□ 1.53
TRIM13-204ENST00000420995 CCER1Q8TC90 406 aaPredicted RBP24.5■■□□□ 1.51
TRIM13-204ENST00000420995 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
TRIM13-204ENST00000420995 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
TRIM13-204ENST00000420995 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
TRIM13-204ENST00000420995 CCDC88BA6NC98 1476 aa24.46■■□□□ 1.51
TRIM13-204ENST00000420995 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
TRIM13-204ENST00000420995 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
TRIM13-204ENST00000420995 BICRAQ9NZM4 1560 aa24.39■■□□□ 1.5
TRIM13-204ENST00000420995 CEP162Q5TB80 1403 aa24.35■■□□□ 1.49
TRIM13-204ENST00000420995 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
TRIM13-204ENST00000420995 SOGA1O94964 1423 aa24.33■■□□□ 1.49
TRIM13-204ENST00000420995 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
TRIM13-204ENST00000420995 PELP1Q8IZL8 1130 aaKnown RBP24.27■■□□□ 1.48
TRIM13-204ENST00000420995 TNIKQ9UKE5 1360 aa24.22■■□□□ 1.47
TRIM13-204ENST00000420995 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.47
TRIM13-204ENST00000420995 DIEXFQ68CQ4 756 aaKnown RBP24.19■■□□□ 1.46
TRIM13-204ENST00000420995 ACIN1Q9UKV3 1341 aaKnown RBP24.19■■□□□ 1.46
TRIM13-204ENST00000420995 NEUROD1Q13562 356 aa24.18■■□□□ 1.46
TRIM13-204ENST00000420995 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
TRIM13-204ENST00000420995 UBTFP17480 764 aaKnown RBP24.16■■□□□ 1.46
TRIM13-204ENST00000420995 EEA1Q15075 1411 aa24.11■■□□□ 1.45
TRIM13-204ENST00000420995 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
TRIM13-204ENST00000420995 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
TRIM13-204ENST00000420995 CENPBP07199 599 aaPredicted RBP23.96■■□□□ 1.43
TRIM13-204ENST00000420995 GTF3C3Q9Y5Q9 886 aa23.96■■□□□ 1.43
TRIM13-204ENST00000420995 ATAD2BQ9ULI0 1458 aa23.91■■□□□ 1.42
TRIM13-204ENST00000420995 ZNF316A6NFI3 1004 aaPredicted RBP23.89■■□□□ 1.41
TRIM13-204ENST00000420995 SYNJ1O43426 1573 aa23.87■■□□□ 1.41
TRIM13-204ENST00000420995 HNRNPUL2Q1KMD3 747 aaKnown RBP23.86■■□□□ 1.41
TRIM13-204ENST00000420995 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
TRIM13-204ENST00000420995 BAZ1BQ9UIG0 1483 aaKnown RBP23.82■■□□□ 1.4
TRIM13-204ENST00000420995 CLIP1P30622 1438 aa23.82■■□□□ 1.4
TRIM13-204ENST00000420995 KIF21BO75037 1637 aa23.79■■□□□ 1.4
TRIM13-204ENST00000420995 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
TRIM13-204ENST00000420995 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
TRIM13-204ENST00000420995 RANGAP1P46060 587 aaPredicted RBP23.72■■□□□ 1.39
TRIM13-204ENST00000420995 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
TRIM13-204ENST00000420995 MIER1Q8N108 512 aa23.65■■□□□ 1.38
TRIM13-204ENST00000420995 APLP2Q06481 763 aa23.64■■□□□ 1.37
TRIM13-204ENST00000420995 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
TRIM13-204ENST00000420995 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
TRIM13-204ENST00000420995 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
TRIM13-204ENST00000420995 ARAP1Q96P48 1450 aa23.39■■□□□ 1.33
TRIM13-204ENST00000420995 PRXQ9BXM0 1461 aa23.38■■□□□ 1.33
TRIM13-204ENST00000420995 DHX57Q6P158 1386 aaKnown RBP23.38■■□□□ 1.33
TRIM13-204ENST00000420995 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
TRIM13-204ENST00000420995 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
TRIM13-204ENST00000420995 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
TRIM13-204ENST00000420995 CLSPNQ9HAW4 1339 aa23.3■■□□□ 1.32
TRIM13-204ENST00000420995 CUX1P39880 1505 aa23.26■■□□□ 1.31
TRIM13-204ENST00000420995 CFTRP13569 1480 aa23.23■■□□□ 1.31
TRIM13-204ENST00000420995 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
TRIM13-204ENST00000420995 KIF27Q86VH2 1401 aa23.19■■□□□ 1.3
TRIM13-204ENST00000420995 ARHGAP35Q9NRY4 1499 aa23.13■■□□□ 1.29
TRIM13-204ENST00000420995 ITGAEP38570 1179 aa23.13■■□□□ 1.29
TRIM13-204ENST00000420995 CCNB3Q8WWL7 1395 aa23.13■■□□□ 1.29
TRIM13-204ENST00000420995 CUX2O14529 1486 aa23.09■■□□□ 1.29
TRIM13-204ENST00000420995 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
TRIM13-204ENST00000420995 MYT1Q01538 1121 aa23.05■■□□□ 1.28
TRIM13-204ENST00000420995 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
TRIM13-204ENST00000420995 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
TRIM13-204ENST00000420995 SUPT16HQ9Y5B9 1047 aaKnown RBP23■■□□□ 1.27
TRIM13-204ENST00000420995 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
TRIM13-204ENST00000420995 IGF1RP08069 1367 aa22.94■■□□□ 1.26
TRIM13-204ENST00000420995 MAPKBP1O60336 1514 aa22.94■■□□□ 1.26
TRIM13-204ENST00000420995 TIAM1Q13009 1591 aa22.9■■□□□ 1.26
TRIM13-204ENST00000420995 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
TRIM13-204ENST00000420995 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
TRIM13-204ENST00000420995 PHLDB1Q86UU1 1377 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms