RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
AC004540.1-205ENST00000420774 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
AC004540.1-205ENST00000420774 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
AC004540.1-205ENST00000420774 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
AC004540.1-205ENST00000420774 SHROOM2Q13796 1616 aa21.09■□□□□ 0.97
AC004540.1-205ENST00000420774 CTTNBP2Q8WZ74 1663 aa21.07■□□□□ 0.96
AC004540.1-205ENST00000420774 KIAA0586Q9BVV6 1533 aa21.06■□□□□ 0.96
AC004540.1-205ENST00000420774 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
AC004540.1-205ENST00000420774 KIF21BO75037 1637 aa21.05■□□□□ 0.96
AC004540.1-205ENST00000420774 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
AC004540.1-205ENST00000420774 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
AC004540.1-205ENST00000420774 JPH4Q96JJ6 628 aa20.98■□□□□ 0.95
AC004540.1-205ENST00000420774 PRG4Q92954 1404 aaPredicted RBP20.96■□□□□ 0.95
AC004540.1-205ENST00000420774 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
AC004540.1-205ENST00000420774 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
AC004540.1-205ENST00000420774 PHF23Q9BUL5 403 aaPredicted RBP20.91■□□□□ 0.94
AC004540.1-205ENST00000420774 UGGT2Q9NYU1 1516 aa20.88■□□□□ 0.93
AC004540.1-205ENST00000420774 CYB5RLQ6IPT4 315 aa20.86■□□□□ 0.93
AC004540.1-205ENST00000420774 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
AC004540.1-205ENST00000420774 KIAA0556O60303 1618 aa20.84■□□□□ 0.93
AC004540.1-205ENST00000420774 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
AC004540.1-205ENST00000420774 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
AC004540.1-205ENST00000420774 RANGAP1P46060 587 aaPredicted RBP20.79■□□□□ 0.92
AC004540.1-205ENST00000420774 SAMD9Q5K651 1589 aa20.77■□□□□ 0.92
AC004540.1-205ENST00000420774 TTBK1Q5TCY1 1321 aaPredicted RBP20.77■□□□□ 0.91
AC004540.1-205ENST00000420774 TNIKQ9UKE5 1360 aa20.72■□□□□ 0.91
AC004540.1-205ENST00000420774 P3H3Q8IVL6 736 aa20.71■□□□□ 0.91
AC004540.1-205ENST00000420774 PTPRGP23470 1445 aa20.7■□□□□ 0.9
AC004540.1-205ENST00000420774 ADCY10Q96PN6 1610 aa20.68■□□□□ 0.9
AC004540.1-205ENST00000420774 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
AC004540.1-205ENST00000420774 EFCAB5A4FU69 1503 aa20.66■□□□□ 0.9
AC004540.1-205ENST00000420774 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
AC004540.1-205ENST00000420774 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
AC004540.1-205ENST00000420774 PLB1Q6P1J6 1458 aa20.61■□□□□ 0.89
AC004540.1-205ENST00000420774 ABCC2Q92887 1545 aa20.58■□□□□ 0.89
AC004540.1-205ENST00000420774 UACAQ9BZF9 1416 aa20.58■□□□□ 0.88
AC004540.1-205ENST00000420774 ABCA8O94911 1581 aa20.58■□□□□ 0.88
AC004540.1-205ENST00000420774 UHRF1BP1LA0JNW5 1464 aa20.55■□□□□ 0.88
AC004540.1-205ENST00000420774 CLIP1P30622 1438 aa20.54■□□□□ 0.88
AC004540.1-205ENST00000420774 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
AC004540.1-205ENST00000420774 CEP162Q5TB80 1403 aa20.52■□□□□ 0.87
AC004540.1-205ENST00000420774 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
AC004540.1-205ENST00000420774 KDM5BQ9UGL1 1544 aa20.47■□□□□ 0.87
AC004540.1-205ENST00000420774 ARID3CA6NKF2 412 aa20.46■□□□□ 0.87
AC004540.1-205ENST00000420774 NPM1P06748 294 aaKnown RBP eCLIP20.45■□□□□ 0.86
AC004540.1-205ENST00000420774 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
AC004540.1-205ENST00000420774 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
AC004540.1-205ENST00000420774 FMN1Q68DA7 1419 aa20.44■□□□□ 0.86
AC004540.1-205ENST00000420774 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
AC004540.1-205ENST00000420774 LRRIQ1Q96JM4 1722 aa20.41■□□□□ 0.86
AC004540.1-205ENST00000420774 KIF13AQ9H1H9 1805 aa20.4■□□□□ 0.86
AC004540.1-205ENST00000420774 HECW1Q76N89 1606 aa20.39■□□□□ 0.86
AC004540.1-205ENST00000420774 ATP10BO94823 1461 aa20.39■□□□□ 0.85
AC004540.1-205ENST00000420774 ASXL2Q76L83 1435 aa20.38■□□□□ 0.85
AC004540.1-205ENST00000420774 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
AC004540.1-205ENST00000420774 CDK13Q14004 1512 aaKnown RBP20.36■□□□□ 0.85
AC004540.1-205ENST00000420774 DIP2BQ9P265 1576 aa20.35■□□□□ 0.85
AC004540.1-205ENST00000420774 ATP1B4Q9UN42 357 aaPredicted RBP20.34■□□□□ 0.85
AC004540.1-205ENST00000420774 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.84
AC004540.1-205ENST00000420774 EPRSP07814 1512 aaKnown RBP20.32■□□□□ 0.84
AC004540.1-205ENST00000420774 ABCC10Q5T3U5 1492 aa20.31■□□□□ 0.84
AC004540.1-205ENST00000420774 WDR7Q9Y4E6 1490 aa20.3■□□□□ 0.84
AC004540.1-205ENST00000420774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
AC004540.1-205ENST00000420774 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
AC004540.1-205ENST00000420774 FYCO1Q9BQS8 1478 aa20.3■□□□□ 0.84
AC004540.1-205ENST00000420774 FAM69CQ0P6D2 419 aa20.26■□□□□ 0.83
AC004540.1-205ENST00000420774 TSPOAP1O95153 1857 aa20.24■□□□□ 0.83
AC004540.1-205ENST00000420774 VPS8Q8N3P4 1428 aa20.24■□□□□ 0.83
AC004540.1-205ENST00000420774 GLI2P10070 1586 aa20.22■□□□□ 0.83
AC004540.1-205ENST00000420774 KCNH8Q96L42 1107 aa20.22■□□□□ 0.83
AC004540.1-205ENST00000420774 CCDC18Q5T9S5 1454 aa20.21■□□□□ 0.83
AC004540.1-205ENST00000420774 MAP3K4Q9Y6R4 1608 aa20.2■□□□□ 0.82
AC004540.1-205ENST00000420774 MAGI3Q5TCQ9 1506 aa20.18■□□□□ 0.82
AC004540.1-205ENST00000420774 PPRC1Q5VV67 1664 aaKnown RBP20.18■□□□□ 0.82
AC004540.1-205ENST00000420774 CFAP43Q8NDM7 1665 aa20.16■□□□□ 0.82
AC004540.1-205ENST00000420774 PLEKHD1A6NEE1 506 aa20.16■□□□□ 0.82
AC004540.1-205ENST00000420774 KIF14Q15058 1648 aa20.16■□□□□ 0.82
AC004540.1-205ENST00000420774 ABCA9Q8IUA7 1624 aa20.15■□□□□ 0.82
AC004540.1-205ENST00000420774 TTC37Q6PGP7 1564 aa20.13■□□□□ 0.81
AC004540.1-205ENST00000420774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.81
AC004540.1-205ENST00000420774 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
AC004540.1-205ENST00000420774 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
AC004540.1-205ENST00000420774 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
AC004540.1-205ENST00000420774 CD109Q6YHK3 1445 aa20.08■□□□□ 0.8
AC004540.1-205ENST00000420774 MYO5CQ9NQX4 1742 aa20.04■□□□□ 0.8
AC004540.1-205ENST00000420774 EHBP1L1Q8N3D4 1523 aa20.03■□□□□ 0.8
AC004540.1-205ENST00000420774 MTUS2Q5JR59 1369 aa20.02■□□□□ 0.8
AC004540.1-205ENST00000420774 MAP3K1Q13233 1512 aa20■□□□□ 0.79
AC004540.1-205ENST00000420774 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
AC004540.1-205ENST00000420774 CDC42BPAQ5VT25 1732 aa19.99■□□□□ 0.79
AC004540.1-205ENST00000420774 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
AC004540.1-205ENST00000420774 KANK4Q5T7N3 995 aaPredicted RBP19.98■□□□□ 0.79
AC004540.1-205ENST00000420774 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
AC004540.1-205ENST00000420774 KDM6BO15054 1643 aa19.97■□□□□ 0.79
AC004540.1-205ENST00000420774 SUPT6HQ7KZ85 1726 aaKnown RBP19.96■□□□□ 0.79
AC004540.1-205ENST00000420774 PREX2Q70Z35 1606 aa19.96■□□□□ 0.79
AC004540.1-205ENST00000420774 PLCH2O75038 1416 aa19.93■□□□□ 0.78
AC004540.1-205ENST00000420774 FANCAO15360 1455 aa19.92■□□□□ 0.78
AC004540.1-205ENST00000420774 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
AC004540.1-205ENST00000420774 APLP2Q06481 763 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms