RNA–Protein interactions for RNA: ENST00000418425.6

LETMD1-203, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-203ENST00000418425 PPARGC1BQ86YN6 1023 aaKnown RBP23.56■■□□□ 1.36
LETMD1-203ENST00000418425 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
LETMD1-203ENST00000418425 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
LETMD1-203ENST00000418425 NUP160Q12769 1436 aa23.47■■□□□ 1.35
LETMD1-203ENST00000418425 CTTNBP2Q8WZ74 1663 aa23.47■■□□□ 1.35
LETMD1-203ENST00000418425 UBTFP17480 764 aaKnown RBP23.45■■□□□ 1.34
LETMD1-203ENST00000418425 CLASP1Q7Z460 1538 aa23.37■■□□□ 1.33
LETMD1-203ENST00000418425 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
LETMD1-203ENST00000418425 TNIKQ9UKE5 1360 aa23.36■■□□□ 1.33
LETMD1-203ENST00000418425 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
LETMD1-203ENST00000418425 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
LETMD1-203ENST00000418425 RANGAP1P46060 587 aaPredicted RBP23.3■■□□□ 1.32
LETMD1-203ENST00000418425 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
LETMD1-203ENST00000418425 JPH4Q96JJ6 628 aa23.23■■□□□ 1.31
LETMD1-203ENST00000418425 UGGT2Q9NYU1 1516 aa23.22■■□□□ 1.31
LETMD1-203ENST00000418425 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
LETMD1-203ENST00000418425 ERCC6L2Q5T890 1561 aa23.2■■□□□ 1.3
LETMD1-203ENST00000418425 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
LETMD1-203ENST00000418425 SAMD9Q5K651 1589 aa23.18■■□□□ 1.3
LETMD1-203ENST00000418425 ARHGAP35Q9NRY4 1499 aa23.17■■□□□ 1.3
LETMD1-203ENST00000418425 CLIP1P30622 1438 aa23.16■■□□□ 1.3
LETMD1-203ENST00000418425 PRG4Q92954 1404 aaPredicted RBP23.15■■□□□ 1.3
LETMD1-203ENST00000418425 KIAA0556O60303 1618 aa23.14■■□□□ 1.29
LETMD1-203ENST00000418425 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
LETMD1-203ENST00000418425 EFCAB5A4FU69 1503 aa23.1■■□□□ 1.29
LETMD1-203ENST00000418425 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
LETMD1-203ENST00000418425 FHOD3Q2V2M9 1422 aa23.08■■□□□ 1.29
LETMD1-203ENST00000418425 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
LETMD1-203ENST00000418425 CARMIL2Q6F5E8 1435 aa23.04■■□□□ 1.28
LETMD1-203ENST00000418425 TTBK1Q5TCY1 1321 aaPredicted RBP23■■□□□ 1.27
LETMD1-203ENST00000418425 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
LETMD1-203ENST00000418425 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
LETMD1-203ENST00000418425 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
LETMD1-203ENST00000418425 PTPRGP23470 1445 aa22.91■■□□□ 1.26
LETMD1-203ENST00000418425 PLB1Q6P1J6 1458 aa22.89■■□□□ 1.25
LETMD1-203ENST00000418425 PCF11O94913 1555 aaKnown RBP22.88■■□□□ 1.25
LETMD1-203ENST00000418425 VPS8Q8N3P4 1428 aa22.87■■□□□ 1.25
LETMD1-203ENST00000418425 FMN1Q68DA7 1419 aa22.86■■□□□ 1.25
LETMD1-203ENST00000418425 DNAJC5Q9H3Z4 198 aa22.86■■□□□ 1.25
LETMD1-203ENST00000418425 ABCA8O94911 1581 aa22.84■■□□□ 1.25
LETMD1-203ENST00000418425 LRRIQ1Q96JM4 1722 aa22.84■■□□□ 1.25
LETMD1-203ENST00000418425 RAPGEF6Q8TEU7 1601 aa22.83■■□□□ 1.25
LETMD1-203ENST00000418425 CASKIN1Q8WXD9 1431 aa22.79■■□□□ 1.24
LETMD1-203ENST00000418425 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
LETMD1-203ENST00000418425 ADCY10Q96PN6 1610 aa22.79■■□□□ 1.24
LETMD1-203ENST00000418425 UACAQ9BZF9 1416 aa22.78■■□□□ 1.24
LETMD1-203ENST00000418425 NUP153P49790 1475 aaKnown RBP22.77■■□□□ 1.24
LETMD1-203ENST00000418425 FYCO1Q9BQS8 1478 aa22.76■■□□□ 1.23
LETMD1-203ENST00000418425 ABCC2Q92887 1545 aa22.75■■□□□ 1.23
LETMD1-203ENST00000418425 ARID3CA6NKF2 412 aa22.75■■□□□ 1.23
LETMD1-203ENST00000418425 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
LETMD1-203ENST00000418425 HECW1Q76N89 1606 aa22.74■■□□□ 1.23
LETMD1-203ENST00000418425 CCER1Q8TC90 406 aaPredicted RBP22.73■■□□□ 1.23
LETMD1-203ENST00000418425 UHRF1BP1LA0JNW5 1464 aa22.71■■□□□ 1.23
LETMD1-203ENST00000418425 CDK13Q14004 1512 aaKnown RBP22.71■■□□□ 1.23
LETMD1-203ENST00000418425 EPRSP07814 1512 aaKnown RBP22.69■■□□□ 1.22
LETMD1-203ENST00000418425 ATP10BO94823 1461 aa22.66■■□□□ 1.22
LETMD1-203ENST00000418425 ZCCHC11Q5TAX3 1644 aaKnown RBP22.65■■□□□ 1.22
LETMD1-203ENST00000418425 CFAP43Q8NDM7 1665 aa22.64■■□□□ 1.21
LETMD1-203ENST00000418425 KDM5BQ9UGL1 1544 aa22.64■■□□□ 1.21
LETMD1-203ENST00000418425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.63■■□□□ 1.21
LETMD1-203ENST00000418425 TIAM1Q13009 1591 aa22.62■■□□□ 1.21
LETMD1-203ENST00000418425 MAGI3Q5TCQ9 1506 aa22.6■■□□□ 1.21
LETMD1-203ENST00000418425 CCDC18Q5T9S5 1454 aa22.6■■□□□ 1.21
LETMD1-203ENST00000418425 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
LETMD1-203ENST00000418425 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
LETMD1-203ENST00000418425 HNRNPUL2Q1KMD3 747 aaKnown RBP22.56■■□□□ 1.2
LETMD1-203ENST00000418425 MAP3K1Q13233 1512 aa22.55■■□□□ 1.2
LETMD1-203ENST00000418425 LRRC9Q6ZRR7 1453 aa22.5■■□□□ 1.19
LETMD1-203ENST00000418425 APLP2Q06481 763 aa22.5■■□□□ 1.19
LETMD1-203ENST00000418425 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
LETMD1-203ENST00000418425 NPM1P06748 294 aaKnown RBP eCLIP22.47■■□□□ 1.19
LETMD1-203ENST00000418425 KIF14Q15058 1648 aa22.45■■□□□ 1.18
LETMD1-203ENST00000418425 MAPKBP1O60336 1514 aa22.45■■□□□ 1.18
LETMD1-203ENST00000418425 MTUS2Q5JR59 1369 aa22.44■■□□□ 1.18
LETMD1-203ENST00000418425 TROQ12816 1431 aaPredicted RBP22.44■■□□□ 1.18
LETMD1-203ENST00000418425 EHBP1L1Q8N3D4 1523 aa22.44■■□□□ 1.18
LETMD1-203ENST00000418425 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
LETMD1-203ENST00000418425 PLEKHD1A6NEE1 506 aa22.43■■□□□ 1.18
LETMD1-203ENST00000418425 WDR7Q9Y4E6 1490 aa22.43■■□□□ 1.18
LETMD1-203ENST00000418425 CDK11AQ9UQ88 783 aaPredicted RBP22.41■■□□□ 1.18
LETMD1-203ENST00000418425 DIEXFQ68CQ4 756 aaKnown RBP22.39■■□□□ 1.17
LETMD1-203ENST00000418425 KCNH8Q96L42 1107 aa22.39■■□□□ 1.17
LETMD1-203ENST00000418425 SUPT6HQ7KZ85 1726 aaKnown RBP22.37■■□□□ 1.17
LETMD1-203ENST00000418425 NCOA2Q15596 1464 aa22.35■■□□□ 1.17
LETMD1-203ENST00000418425 TTC37Q6PGP7 1564 aa22.35■■□□□ 1.17
LETMD1-203ENST00000418425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.34■■□□□ 1.17
LETMD1-203ENST00000418425 ACIN1Q9UKV3 1341 aaKnown RBP22.33■■□□□ 1.17
LETMD1-203ENST00000418425 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.16
LETMD1-203ENST00000418425 CENPBP07199 599 aaPredicted RBP22.32■■□□□ 1.16
LETMD1-203ENST00000418425 DIP2BQ9P265 1576 aa22.31■■□□□ 1.16
LETMD1-203ENST00000418425 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
LETMD1-203ENST00000418425 PHLDB1Q86UU1 1377 aa22.3■■□□□ 1.16
LETMD1-203ENST00000418425 CDC42BPAQ5VT25 1732 aa22.29■■□□□ 1.16
LETMD1-203ENST00000418425 ABCA9Q8IUA7 1624 aa22.29■■□□□ 1.16
LETMD1-203ENST00000418425 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
LETMD1-203ENST00000418425 CDC42BPBQ9Y5S2 1711 aa22.24■■□□□ 1.15
LETMD1-203ENST00000418425 GPATCH8Q9UKJ3 1502 aaKnown RBP22.23■■□□□ 1.15
LETMD1-203ENST00000418425 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
LETMD1-203ENST00000418425 GLI2P10070 1586 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms