RNA–Protein interactions for RNA: ENST00000418425.6

LETMD1-203, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-203ENST00000418425 NISCHQ9Y2I1 1504 aa34.01■■■■□ 3.03
LETMD1-203ENST00000418425 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
LETMD1-203ENST00000418425 ABCC9O60706 1549 aa28.84■■■□□ 2.21
LETMD1-203ENST00000418425 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.15
LETMD1-203ENST00000418425 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
LETMD1-203ENST00000418425 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
LETMD1-203ENST00000418425 NACADO15069 1562 aa27.98■■■□□ 2.07
LETMD1-203ENST00000418425 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
LETMD1-203ENST00000418425 RB1CC1Q8TDY2 1594 aa27.89■■■□□ 2.06
LETMD1-203ENST00000418425 SCRIBQ14160 1630 aa27.47■■□□□ 1.99
LETMD1-203ENST00000418425 UNC13AQ9UPW8 1703 aa27.46■■□□□ 1.99
LETMD1-203ENST00000418425 SHROOM4Q9ULL8 1493 aa27.32■■□□□ 1.96
LETMD1-203ENST00000418425 BICRAQ9NZM4 1560 aa27.15■■□□□ 1.94
LETMD1-203ENST00000418425 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
LETMD1-203ENST00000418425 CECR2Q9BXF3 1484 aa26.51■■□□□ 1.83
LETMD1-203ENST00000418425 EIF4G1Q04637 1599 aaKnown RBP26.34■■□□□ 1.81
LETMD1-203ENST00000418425 SMARCA4P51532 1647 aa26.29■■□□□ 1.8
LETMD1-203ENST00000418425 MROH2BQ7Z745 1585 aa26.28■■□□□ 1.8
LETMD1-203ENST00000418425 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
LETMD1-203ENST00000418425 RSF1Q96T23 1441 aaPredicted RBP26.15■■□□□ 1.78
LETMD1-203ENST00000418425 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
LETMD1-203ENST00000418425 WIZO95785 1651 aa26.06■■□□□ 1.76
LETMD1-203ENST00000418425 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
LETMD1-203ENST00000418425 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
LETMD1-203ENST00000418425 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
LETMD1-203ENST00000418425 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
LETMD1-203ENST00000418425 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
LETMD1-203ENST00000418425 NCAPD3P42695 1498 aa25.83■■□□□ 1.73
LETMD1-203ENST00000418425 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
LETMD1-203ENST00000418425 HMGXB3Q12766 1538 aa25.76■■□□□ 1.71
LETMD1-203ENST00000418425 TOP2AP11388 1531 aaKnown RBP25.71■■□□□ 1.71
LETMD1-203ENST00000418425 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
LETMD1-203ENST00000418425 NESP48681 1621 aa25.18■■□□□ 1.62
LETMD1-203ENST00000418425 CADPSQ9ULU8 1353 aa25.11■■□□□ 1.61
LETMD1-203ENST00000418425 CFTRP13569 1480 aa25.11■■□□□ 1.61
LETMD1-203ENST00000418425 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
LETMD1-203ENST00000418425 PRDM2Q13029 1718 aa25.02■■□□□ 1.6
LETMD1-203ENST00000418425 KIF21AQ7Z4S6 1674 aa24.9■■□□□ 1.58
LETMD1-203ENST00000418425 FANCD2Q9BXW9 1451 aa24.86■■□□□ 1.57
LETMD1-203ENST00000418425 CHIC1Q5VXU3 224 aa24.85■■□□□ 1.57
LETMD1-203ENST00000418425 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
LETMD1-203ENST00000418425 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
LETMD1-203ENST00000418425 CEP164Q9UPV0 1460 aa24.74■■□□□ 1.55
LETMD1-203ENST00000418425 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
LETMD1-203ENST00000418425 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
LETMD1-203ENST00000418425 THOC2Q8NI27 1593 aaKnown RBP24.62■■□□□ 1.53
LETMD1-203ENST00000418425 CUX1P39880 1505 aa24.61■■□□□ 1.53
LETMD1-203ENST00000418425 SYNJ1O43426 1573 aa24.6■■□□□ 1.53
LETMD1-203ENST00000418425 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
LETMD1-203ENST00000418425 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
LETMD1-203ENST00000418425 TOPBP1Q92547 1522 aa24.54■■□□□ 1.52
LETMD1-203ENST00000418425 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
LETMD1-203ENST00000418425 WDR62O43379 1518 aa24.52■■□□□ 1.52
LETMD1-203ENST00000418425 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
LETMD1-203ENST00000418425 BIVM-ERCC5R4GMW8 1640 aa24.51■■□□□ 1.51
LETMD1-203ENST00000418425 HRCP23327 699 aa24.41■■□□□ 1.5
LETMD1-203ENST00000418425 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
LETMD1-203ENST00000418425 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
LETMD1-203ENST00000418425 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.49
LETMD1-203ENST00000418425 CUX2O14529 1486 aa24.34■■□□□ 1.49
LETMD1-203ENST00000418425 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
LETMD1-203ENST00000418425 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
LETMD1-203ENST00000418425 SOGA1O94964 1423 aa24.24■■□□□ 1.47
LETMD1-203ENST00000418425 WDR97A6NE52 1622 aa24.22■■□□□ 1.47
LETMD1-203ENST00000418425 IFT140Q96RY7 1462 aa24.18■■□□□ 1.46
LETMD1-203ENST00000418425 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
LETMD1-203ENST00000418425 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
LETMD1-203ENST00000418425 RUSC2Q8N2Y8 1516 aa24.13■■□□□ 1.45
LETMD1-203ENST00000418425 PCGF6Q9BYE7 350 aa24.13■■□□□ 1.45
LETMD1-203ENST00000418425 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
LETMD1-203ENST00000418425 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
LETMD1-203ENST00000418425 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.441e-6■■□□□ 12.7
LETMD1-203ENST00000418425 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
LETMD1-203ENST00000418425 KIF27Q86VH2 1401 aa24■■□□□ 1.43
LETMD1-203ENST00000418425 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
LETMD1-203ENST00000418425 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
LETMD1-203ENST00000418425 PBRM1Q86U86 1689 aa23.97■■□□□ 1.43
LETMD1-203ENST00000418425 LOC105371045A0A1W2PR82 267 aa23.94■■□□□ 1.42
LETMD1-203ENST00000418425 IGF1RP08069 1367 aa23.89■■□□□ 1.41
LETMD1-203ENST00000418425 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
LETMD1-203ENST00000418425 TRIM26Q12899 539 aaPredicted RBP23.87■■□□□ 1.41
LETMD1-203ENST00000418425 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
LETMD1-203ENST00000418425 EEA1Q15075 1411 aa23.86■■□□□ 1.41
LETMD1-203ENST00000418425 CSRNP3Q8WYN3 585 aa23.83■■□□□ 1.4
LETMD1-203ENST00000418425 SNAPC4Q5SXM2 1469 aa23.82■■□□□ 1.4
LETMD1-203ENST00000418425 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
LETMD1-203ENST00000418425 CUL7Q14999 1698 aa23.76■■□□□ 1.39
LETMD1-203ENST00000418425 MAGI1Q96QZ7 1491 aaPredicted RBP23.74■■□□□ 1.39
LETMD1-203ENST00000418425 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
LETMD1-203ENST00000418425 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
LETMD1-203ENST00000418425 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
LETMD1-203ENST00000418425 EHMT2Q96KQ7 1210 aa23.69■■□□□ 1.38
LETMD1-203ENST00000418425 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
LETMD1-203ENST00000418425 CHD1O14646 1710 aa23.68■■□□□ 1.38
LETMD1-203ENST00000418425 KIF21BO75037 1637 aa23.68■■□□□ 1.38
LETMD1-203ENST00000418425 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
LETMD1-203ENST00000418425 FBLN2P98095 1184 aa23.62■■□□□ 1.37
LETMD1-203ENST00000418425 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
LETMD1-203ENST00000418425 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
LETMD1-203ENST00000418425 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms