RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 DEKP35659 375 aaKnown RBP24.61■■□□□ 1.53
PMS1-206ENST00000418224 CUX2O14529 1486 aa24.61■■□□□ 1.53
PMS1-206ENST00000418224 FAM50AQ14320 339 aaKnown RBP24.57■■□□□ 1.52
PMS1-206ENST00000418224 FANCIQ9NVI1 1328 aa24.57■■□□□ 1.52
PMS1-206ENST00000418224 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
PMS1-206ENST00000418224 CDK11AQ9UQ88 783 aaPredicted RBP24.54■■□□□ 1.52
PMS1-206ENST00000418224 ANO8Q9HCE9 1232 aaPredicted RBP24.54■■□□□ 1.52
PMS1-206ENST00000418224 IRX6P78412 446 aaPredicted RBP24.53■■□□□ 1.52
PMS1-206ENST00000418224 SIN3AQ96ST3 1273 aa24.53■■□□□ 1.52
PMS1-206ENST00000418224 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
PMS1-206ENST00000418224 MAPKBP1O60336 1514 aa24.49■■□□□ 1.51
PMS1-206ENST00000418224 P3H3Q8IVL6 736 aa24.48■■□□□ 1.51
PMS1-206ENST00000418224 SETD5Q9C0A6 1442 aa24.48■■□□□ 1.51
PMS1-206ENST00000418224 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
PMS1-206ENST00000418224 CFTRP13569 1480 aa24.46■■□□□ 1.51
PMS1-206ENST00000418224 HIRIP3Q9BW71 556 aaPredicted RBP24.45■■□□□ 1.5
PMS1-206ENST00000418224 IGF1RP08069 1367 aa24.45■■□□□ 1.5
PMS1-206ENST00000418224 TIAM1Q13009 1591 aa24.43■■□□□ 1.5
PMS1-206ENST00000418224 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
PMS1-206ENST00000418224 MYT1LQ9UL68 1186 aa24.41■■□□□ 1.5
PMS1-206ENST00000418224 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
PMS1-206ENST00000418224 NBR1Q14596 966 aa24.4■■□□□ 1.5
PMS1-206ENST00000418224 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
PMS1-206ENST00000418224 LRRC9Q6ZRR7 1453 aa24.38■■□□□ 1.49
PMS1-206ENST00000418224 ANP32CO43423 234 aa24.35■■□□□ 1.49
PMS1-206ENST00000418224 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
PMS1-206ENST00000418224 MAP3K1Q13233 1512 aa24.3■■□□□ 1.48
PMS1-206ENST00000418224 SALL2Q9Y467 1007 aaPredicted RBP24.29■■□□□ 1.48
PMS1-206ENST00000418224 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
PMS1-206ENST00000418224 CCER2I3L3R5 266 aa24.27■■□□□ 1.48
PMS1-206ENST00000418224 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
PMS1-206ENST00000418224 HNRNPUQ00839 825 aaKnown RBP eCLIP24.23■■□□□ 1.47
PMS1-206ENST00000418224 CCDC136Q96JN2 1154 aa24.23■■□□□ 1.47
PMS1-206ENST00000418224 FHOD3Q2V2M9 1422 aa24.21■■□□□ 1.47
PMS1-206ENST00000418224 PCF11O94913 1555 aaKnown RBP24.21■■□□□ 1.47
PMS1-206ENST00000418224 TIMELESSQ9UNS1 1208 aa24.2■■□□□ 1.46
PMS1-206ENST00000418224 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
PMS1-206ENST00000418224 NOP58Q9Y2X3 529 aaKnown RBP24.18■■□□□ 1.46
PMS1-206ENST00000418224 PAK3O75914 559 aaPredicted RBP24.17■■□□□ 1.46
PMS1-206ENST00000418224 TONSLQ96HA7 1378 aa24.16■■□□□ 1.46
PMS1-206ENST00000418224 RTN4Q9NQC3 1192 aaKnown RBP24.15■■□□□ 1.46
PMS1-206ENST00000418224 CFAP43Q8NDM7 1665 aa24.12■■□□□ 1.45
PMS1-206ENST00000418224 B4GALNT3Q6L9W6 998 aa24.12■■□□□ 1.45
PMS1-206ENST00000418224 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
PMS1-206ENST00000418224 PPP4R2Q9NY27 417 aa24.1■■□□□ 1.45
PMS1-206ENST00000418224 IL27Q8NEV9 243 aa24.08■■□□□ 1.45
PMS1-206ENST00000418224 RTL5Q5HYW3 569 aaPredicted RBP24.05■■□□□ 1.44
PMS1-206ENST00000418224 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.05■■□□□ 1.44
PMS1-206ENST00000418224 FYCO1Q9BQS8 1478 aa24.04■■□□□ 1.44
PMS1-206ENST00000418224 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
PMS1-206ENST00000418224 ERICH6BQ5W0A0 696 aa24.03■■□□□ 1.44
PMS1-206ENST00000418224 MTUS2Q5JR59 1369 aa24.02■■□□□ 1.44
PMS1-206ENST00000418224 CASKIN1Q8WXD9 1431 aa24.02■■□□□ 1.44
PMS1-206ENST00000418224 FGD6Q6ZV73 1430 aa24.02■■□□□ 1.43
PMS1-206ENST00000418224 CCDC18Q5T9S5 1454 aa24.01■■□□□ 1.43
PMS1-206ENST00000418224 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.97■■□□□ 1.43
PMS1-206ENST00000418224 FANCD2Q9BXW9 1451 aa23.97■■□□□ 1.43
PMS1-206ENST00000418224 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
PMS1-206ENST00000418224 PTPRKQ15262 1439 aa23.94■■□□□ 1.42
PMS1-206ENST00000418224 FMN1Q68DA7 1419 aa23.92■■□□□ 1.42
PMS1-206ENST00000418224 UACAQ9BZF9 1416 aa23.92■■□□□ 1.42
PMS1-206ENST00000418224 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.421e-9■■■■□ 22.4
PMS1-206ENST00000418224 HFM1A2PYH4 1435 aa23.9■■□□□ 1.42
PMS1-206ENST00000418224 RRP7BPQ9NSQ0 103 aa23.88■■□□□ 1.41
PMS1-206ENST00000418224 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
PMS1-206ENST00000418224 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
PMS1-206ENST00000418224 ANP32AP39687 249 aaKnown RBP23.87■■□□□ 1.41
PMS1-206ENST00000418224 ZBTB47Q9UFB7 747 aaPredicted RBP23.87■■□□□ 1.41
PMS1-206ENST00000418224 ABCA10Q8WWZ4 1543 aa23.86■■□□□ 1.41
PMS1-206ENST00000418224 PTPN23Q9H3S7 1636 aa23.85■■□□□ 1.41
PMS1-206ENST00000418224 NAIPQ13075 1403 aa23.85■■□□□ 1.41
PMS1-206ENST00000418224 IPO9Q96P70 1041 aaKnown RBP23.83■■□□□ 1.41
PMS1-206ENST00000418224 DNMBPQ6XZF7 1577 aa23.83■■□□□ 1.4
PMS1-206ENST00000418224 TOPBP1Q92547 1522 aa23.83■■□□□ 1.4
PMS1-206ENST00000418224 HSPA5P11021 654 aaKnown RBP23.82■■□□□ 1.4
PMS1-206ENST00000418224 NCOA2Q15596 1464 aa23.82■■□□□ 1.4
PMS1-206ENST00000418224 SNAPC4Q5SXM2 1469 aa23.82■■□□□ 1.4
PMS1-206ENST00000418224 FAM9BQ8IZU0 186 aa23.81■■□□□ 1.4
PMS1-206ENST00000418224 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
PMS1-206ENST00000418224 CTTNBP2Q8WZ74 1663 aa23.8■■□□□ 1.4
PMS1-206ENST00000418224 WASHC2AQ641Q2 1341 aa23.79■■□□□ 1.4
PMS1-206ENST00000418224 CCDC184Q52MB2 194 aa23.78■■□□□ 1.4
PMS1-206ENST00000418224 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
PMS1-206ENST00000418224 CUL7Q14999 1698 aa23.77■■□□□ 1.4
PMS1-206ENST00000418224 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
PMS1-206ENST00000418224 NESP48681 1621 aa23.76■■□□□ 1.39
PMS1-206ENST00000418224 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.39
PMS1-206ENST00000418224 UBE2Q2Q8WVN8 375 aa23.73■■□□□ 1.39
PMS1-206ENST00000418224 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
PMS1-206ENST00000418224 ARID3CA6NKF2 412 aa23.7■■□□□ 1.39
PMS1-206ENST00000418224 EIF5BO60841 1220 aaKnown RBP23.7■■□□□ 1.38
PMS1-206ENST00000418224 LAS1LQ9Y4W2 734 aaKnown RBP23.7■■□□□ 1.38
PMS1-206ENST00000418224 FOXD1Q16676 465 aa23.69■■□□□ 1.38
PMS1-206ENST00000418224 KDM5BQ9UGL1 1544 aa23.69■■□□□ 1.38
PMS1-206ENST00000418224 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
PMS1-206ENST00000418224 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
PMS1-206ENST00000418224 LRRIQ1Q96JM4 1722 aa23.66■■□□□ 1.38
PMS1-206ENST00000418224 NEFMP07197 916 aa23.66■■□□□ 1.38
PMS1-206ENST00000418224 L3MBTL2Q969R5 705 aa23.65■■□□□ 1.38
PMS1-206ENST00000418224 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms