RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 KIF13AQ9H1H9 1805 aa25.33■■□□□ 1.64
TTC38-202ENST00000417709 FAM69CQ0P6D2 419 aa25.32■■□□□ 1.64
TTC38-202ENST00000417709 ABCC10Q5T3U5 1492 aa25.16■■□□□ 1.62
TTC38-202ENST00000417709 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
TTC38-202ENST00000417709 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
TTC38-202ENST00000417709 IGF1RP08069 1367 aa25.09■■□□□ 1.61
TTC38-202ENST00000417709 ADCY10Q96PN6 1610 aa25.07■■□□□ 1.6
TTC38-202ENST00000417709 TSPOAP1O95153 1857 aa25.05■■□□□ 1.6
TTC38-202ENST00000417709 MAPKBP1O60336 1514 aa25.05■■□□□ 1.6
TTC38-202ENST00000417709 KIAA0586Q9BVV6 1533 aa25.05■■□□□ 1.6
TTC38-202ENST00000417709 DIP2BQ9P265 1576 aa25.03■■□□□ 1.6
TTC38-202ENST00000417709 KDM4FA0A1W2PPD8 638 aa25.03■■□□□ 1.6
TTC38-202ENST00000417709 KIF27Q86VH2 1401 aa24.99■■□□□ 1.59
TTC38-202ENST00000417709 PTPRGP23470 1445 aa24.98■■□□□ 1.59
TTC38-202ENST00000417709 KDM6BO15054 1643 aa24.95■■□□□ 1.58
TTC38-202ENST00000417709 CARMIL1Q5VZK9 1371 aa24.91■■□□□ 1.58
TTC38-202ENST00000417709 CUL7Q14999 1698 aa24.89■■□□□ 1.58
TTC38-202ENST00000417709 TNIKQ9UKE5 1360 aa24.85■■□□□ 1.57
TTC38-202ENST00000417709 CARMIL2Q6F5E8 1435 aa24.85■■□□□ 1.57
TTC38-202ENST00000417709 ASXL2Q76L83 1435 aa24.8■■□□□ 1.56
TTC38-202ENST00000417709 ABCC2Q92887 1545 aa24.79■■□□□ 1.56
TTC38-202ENST00000417709 PLB1Q6P1J6 1458 aa24.76■■□□□ 1.55
TTC38-202ENST00000417709 UACAQ9BZF9 1416 aa24.72■■□□□ 1.55
TTC38-202ENST00000417709 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
TTC38-202ENST00000417709 ILDR1Q86SU0 546 aaPredicted RBP24.69■■□□□ 1.54
TTC38-202ENST00000417709 GLI2P10070 1586 aa24.68■■□□□ 1.54
TTC38-202ENST00000417709 UHRF1BP1LA0JNW5 1464 aa24.68■■□□□ 1.54
TTC38-202ENST00000417709 PPRC1Q5VV67 1664 aaKnown RBP24.68■■□□□ 1.54
TTC38-202ENST00000417709 DISP1Q96F81 1524 aa24.66■■□□□ 1.54
TTC38-202ENST00000417709 COL17A1Q9UMD9 1497 aaPredicted RBP24.64■■□□□ 1.54
TTC38-202ENST00000417709 ADGRL1O94910 1474 aa24.62■■□□□ 1.53
TTC38-202ENST00000417709 EPRSP07814 1512 aaKnown RBP24.61■■□□□ 1.53
TTC38-202ENST00000417709 KDM5BQ9UGL1 1544 aa24.59■■□□□ 1.53
TTC38-202ENST00000417709 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.52
TTC38-202ENST00000417709 KCNH8Q96L42 1107 aa24.57■■□□□ 1.52
TTC38-202ENST00000417709 ZCCHC11Q5TAX3 1644 aaKnown RBP24.54■■□□□ 1.52
TTC38-202ENST00000417709 MAP3K4Q9Y6R4 1608 aa24.53■■□□□ 1.52
TTC38-202ENST00000417709 UGGT2Q9NYU1 1516 aa24.53■■□□□ 1.52
TTC38-202ENST00000417709 TEX14Q8IWB6 1497 aa24.52■■□□□ 1.52
TTC38-202ENST00000417709 KIAA0556O60303 1618 aa24.47■■□□□ 1.51
TTC38-202ENST00000417709 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.5
TTC38-202ENST00000417709 CD109Q6YHK3 1445 aa24.43■■□□□ 1.5
TTC38-202ENST00000417709 ARID3CA6NKF2 412 aa24.38■■□□□ 1.49
TTC38-202ENST00000417709 HECW2Q9P2P5 1572 aa24.37■■□□□ 1.49
TTC38-202ENST00000417709 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
TTC38-202ENST00000417709 GOLGA3Q08378 1498 aa24.34■■□□□ 1.49
TTC38-202ENST00000417709 FAM9AQ8IZU1 332 aaPredicted RBP24.33■■□□□ 1.49
TTC38-202ENST00000417709 MAGI3Q5TCQ9 1506 aa24.32■■□□□ 1.48
TTC38-202ENST00000417709 CTTNBP2Q8WZ74 1663 aa24.32■■□□□ 1.48
TTC38-202ENST00000417709 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
TTC38-202ENST00000417709 ABCA8O94911 1581 aa24.29■■□□□ 1.48
TTC38-202ENST00000417709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.19■■□□□ 1.46
TTC38-202ENST00000417709 RAPGEF3O95398 923 aa24.19■■□□□ 1.46
TTC38-202ENST00000417709 HNRNPUL2Q1KMD3 747 aaKnown RBP24.19■■□□□ 1.46
TTC38-202ENST00000417709 KIF21BO75037 1637 aa24.19■■□□□ 1.46
TTC38-202ENST00000417709 ATP10BO94823 1461 aa24.19■■□□□ 1.46
TTC38-202ENST00000417709 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
TTC38-202ENST00000417709 ARAP3Q8WWN8 1544 aa24.15■■□□□ 1.46
TTC38-202ENST00000417709 RANGAP1P46060 587 aaPredicted RBP24.13■■□□□ 1.45
TTC38-202ENST00000417709 ARID4BQ4LE39 1312 aaPredicted RBP24.11■■□□□ 1.45
TTC38-202ENST00000417709 PHLDB1Q86UU1 1377 aa24.09■■□□□ 1.45
TTC38-202ENST00000417709 CSRNP3Q8WYN3 585 aa24.08■■□□□ 1.45
TTC38-202ENST00000417709 FBXO41Q8TF61 875 aa24.06■■□□□ 1.44
TTC38-202ENST00000417709 PTPRMP28827 1452 aa24.04■■□□□ 1.44
TTC38-202ENST00000417709 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
TTC38-202ENST00000417709 ADAMTSL3P82987 1691 aa24■■□□□ 1.43
TTC38-202ENST00000417709 PLEKHD1A6NEE1 506 aa23.98■■□□□ 1.43
TTC38-202ENST00000417709 PLPPR3Q6T4P5 718 aa23.98■■□□□ 1.43
TTC38-202ENST00000417709 NEO1Q92859 1461 aa23.98■■□□□ 1.43
TTC38-202ENST00000417709 RAPGEF6Q8TEU7 1601 aa23.97■■□□□ 1.43
TTC38-202ENST00000417709 SAMD9Q5K651 1589 aa23.94■■□□□ 1.42
TTC38-202ENST00000417709 BCORL1Q5H9F3 1711 aa23.91■■□□□ 1.42
TTC38-202ENST00000417709 NUP153P49790 1475 aaKnown RBP23.9■■□□□ 1.42
TTC38-202ENST00000417709 MADDQ8WXG6 1647 aa23.89■■□□□ 1.42
TTC38-202ENST00000417709 FRMPD1Q5SYB0 1578 aa23.88■■□□□ 1.41
TTC38-202ENST00000417709 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
TTC38-202ENST00000417709 HSPA2P54652 639 aa23.87■■□□□ 1.41
TTC38-202ENST00000417709 DENND4BO75064 1496 aaPredicted RBP23.87■■□□□ 1.41
TTC38-202ENST00000417709 AKNAQ7Z591 1439 aa23.86■■□□□ 1.41
TTC38-202ENST00000417709 MLECQ14165 292 aa23.85■■□□□ 1.41
TTC38-202ENST00000417709 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
TTC38-202ENST00000417709 RIMS1Q86UR5 1692 aaKnown RBP23.82■■□□□ 1.4
TTC38-202ENST00000417709 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
TTC38-202ENST00000417709 FANCAO15360 1455 aa23.81■■□□□ 1.4
TTC38-202ENST00000417709 ATP1B4Q9UN42 357 aaPredicted RBP23.79■■□□□ 1.4
TTC38-202ENST00000417709 RICTORQ6R327 1708 aa23.79■■□□□ 1.4
TTC38-202ENST00000417709 EHMT2Q96KQ7 1210 aa23.77■■□□□ 1.4
TTC38-202ENST00000417709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.76■■□□□ 1.39
TTC38-202ENST00000417709 POGZQ7Z3K3 1410 aa23.76■■□□□ 1.39
TTC38-202ENST00000417709 ARHGEF40Q8TER5 1519 aa23.74■■□□□ 1.39
TTC38-202ENST00000417709 YEATS2Q9ULM3 1422 aa23.74■■□□□ 1.39
TTC38-202ENST00000417709 EEA1Q15075 1411 aa23.71■■□□□ 1.39
TTC38-202ENST00000417709 TTC37Q6PGP7 1564 aa23.7■■□□□ 1.38
TTC38-202ENST00000417709 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.38
TTC38-202ENST00000417709 CFAP74Q9C0B2 1584 aa23.69■■□□□ 1.38
TTC38-202ENST00000417709 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
TTC38-202ENST00000417709 CERKQ8TCT0 537 aa23.68■■□□□ 1.38
TTC38-202ENST00000417709 SIGLEC1Q9BZZ2 1709 aa23.67■■□□□ 1.38
TTC38-202ENST00000417709 CDK13Q14004 1512 aaKnown RBP23.67■■□□□ 1.38
TTC38-202ENST00000417709 UBTFP17480 764 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms