RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 NISCHQ9Y2I1 1504 aa35.83■■■■□ 3.33
TTC38-202ENST00000417709 ABCC9O60706 1549 aa32.75■■■□□ 2.83
TTC38-202ENST00000417709 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
TTC38-202ENST00000417709 DNAJC5BQ9UF47 199 aa31.16■■■□□ 2.58
TTC38-202ENST00000417709 RB1CC1Q8TDY2 1594 aa30.9■■■□□ 2.54
TTC38-202ENST00000417709 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
TTC38-202ENST00000417709 NACADO15069 1562 aa30.58■■■□□ 2.49
TTC38-202ENST00000417709 PABPN1Q86U42 306 aaKnown RBP eCLIP30.57■■■□□ 2.48
TTC38-202ENST00000417709 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
TTC38-202ENST00000417709 BICRAQ9NZM4 1560 aa30.02■■■□□ 2.4
TTC38-202ENST00000417709 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
TTC38-202ENST00000417709 ZCCHC6Q5VYS8 1495 aaKnown RBP29.54■■■□□ 2.32
TTC38-202ENST00000417709 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
TTC38-202ENST00000417709 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
TTC38-202ENST00000417709 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
TTC38-202ENST00000417709 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
TTC38-202ENST00000417709 SHROOM4Q9ULL8 1493 aa29.42■■■□□ 2.3
TTC38-202ENST00000417709 EIF4G1Q04637 1599 aaKnown RBP29.3■■■□□ 2.28
TTC38-202ENST00000417709 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
TTC38-202ENST00000417709 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
TTC38-202ENST00000417709 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
TTC38-202ENST00000417709 CUX2O14529 1486 aa28.24■■■□□ 2.11
TTC38-202ENST00000417709 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
TTC38-202ENST00000417709 NESP48681 1621 aa28.03■■■□□ 2.08
TTC38-202ENST00000417709 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
TTC38-202ENST00000417709 SMARCA4P51532 1647 aa28■■■□□ 2.07
TTC38-202ENST00000417709 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
TTC38-202ENST00000417709 BAZ1BQ9UIG0 1483 aaKnown RBP27.87■■■□□ 2.05
TTC38-202ENST00000417709 BAZ1AQ9NRL2 1556 aaPredicted RBP27.79■■■□□ 2.04
TTC38-202ENST00000417709 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
TTC38-202ENST00000417709 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
TTC38-202ENST00000417709 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
TTC38-202ENST00000417709 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
TTC38-202ENST00000417709 PDS5BQ9NTI5 1447 aa27.59■■■□□ 2.01
TTC38-202ENST00000417709 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
TTC38-202ENST00000417709 TRIM41Q8WV44 630 aa27.52■■■□□ 2
TTC38-202ENST00000417709 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
TTC38-202ENST00000417709 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
TTC38-202ENST00000417709 WIZO95785 1651 aa27.3■■□□□ 1.96
TTC38-202ENST00000417709 WDR62O43379 1518 aa27.21■■□□□ 1.95
TTC38-202ENST00000417709 CEP164Q9UPV0 1460 aa27.15■■□□□ 1.94
TTC38-202ENST00000417709 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
TTC38-202ENST00000417709 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
TTC38-202ENST00000417709 CFTRP13569 1480 aa27.01■■□□□ 1.91
TTC38-202ENST00000417709 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
TTC38-202ENST00000417709 URB2Q14146 1524 aaKnown RBP26.91■■□□□ 1.9
TTC38-202ENST00000417709 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
TTC38-202ENST00000417709 ZNF608Q9ULD9 1512 aaPredicted RBP26.68■■□□□ 1.86
TTC38-202ENST00000417709 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
TTC38-202ENST00000417709 RIMBP3CA6NJZ7 1639 aa26.65■■□□□ 1.86
TTC38-202ENST00000417709 RIMBP3BA6NNM3 1639 aa26.65■■□□□ 1.86
TTC38-202ENST00000417709 RIMBP3Q9UFD9 1639 aa26.65■■□□□ 1.86
TTC38-202ENST00000417709 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
TTC38-202ENST00000417709 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
TTC38-202ENST00000417709 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
TTC38-202ENST00000417709 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
TTC38-202ENST00000417709 ARHGEF11O15085 1522 aa26.51■■□□□ 1.83
TTC38-202ENST00000417709 FBLN2P98095 1184 aa26.49■■□□□ 1.83
TTC38-202ENST00000417709 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
TTC38-202ENST00000417709 AQRO60306 1485 aaKnown RBP eCLIP26.45■■□□□ 1.824e-8■■■■■ 39.8
TTC38-202ENST00000417709 TRHP20396 242 aaPredicted RBP26.41■■□□□ 1.82
TTC38-202ENST00000417709 EIF4G3O43432 1585 aaKnown RBP26.41■■□□□ 1.82
TTC38-202ENST00000417709 DNMBPQ6XZF7 1577 aa26.37■■□□□ 1.81
TTC38-202ENST00000417709 CHD1O14646 1710 aa26.34■■□□□ 1.81
TTC38-202ENST00000417709 TARBP1Q13395 1621 aaKnown RBP26.32■■□□□ 1.8
TTC38-202ENST00000417709 TDRD9Q8NDG6 1382 aaKnown RBP26.26■■□□□ 1.79
TTC38-202ENST00000417709 POLA1P09884 1462 aaPredicted RBP26.25■■□□□ 1.79
TTC38-202ENST00000417709 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
TTC38-202ENST00000417709 ARAP1Q96P48 1450 aa26.23■■□□□ 1.79
TTC38-202ENST00000417709 SOGA1O94964 1423 aa26.22■■□□□ 1.79
TTC38-202ENST00000417709 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
TTC38-202ENST00000417709 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
TTC38-202ENST00000417709 FGD5Q6ZNL6 1462 aa26.05■■□□□ 1.76
TTC38-202ENST00000417709 CUX1P39880 1505 aa25.97■■□□□ 1.75
TTC38-202ENST00000417709 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
TTC38-202ENST00000417709 GRIN2BQ13224 1484 aa25.96■■□□□ 1.75
TTC38-202ENST00000417709 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
TTC38-202ENST00000417709 MAGI1Q96QZ7 1491 aaPredicted RBP25.94■■□□□ 1.74
TTC38-202ENST00000417709 WDR97A6NE52 1622 aa25.9■■□□□ 1.74
TTC38-202ENST00000417709 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.74
TTC38-202ENST00000417709 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
TTC38-202ENST00000417709 GAPVD1Q14C86 1478 aa25.85■■□□□ 1.73
TTC38-202ENST00000417709 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
TTC38-202ENST00000417709 SUPT5HO00267 1087 aaKnown RBP25.74■■□□□ 1.71
TTC38-202ENST00000417709 ABCA10Q8WWZ4 1543 aa25.69■■□□□ 1.7
TTC38-202ENST00000417709 ABCA5Q8WWZ7 1642 aa25.64■■□□□ 1.7
TTC38-202ENST00000417709 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
TTC38-202ENST00000417709 GRIN2AQ12879 1464 aa25.6■■□□□ 1.69
TTC38-202ENST00000417709 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.69
TTC38-202ENST00000417709 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
TTC38-202ENST00000417709 NUP160Q12769 1436 aa25.51■■□□□ 1.67
TTC38-202ENST00000417709 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
TTC38-202ENST00000417709 ADAMTS12P58397 1594 aa25.48■■□□□ 1.67
TTC38-202ENST00000417709 JPH4Q96JJ6 628 aa25.44■■□□□ 1.66
TTC38-202ENST00000417709 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
TTC38-202ENST00000417709 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
TTC38-202ENST00000417709 SHROOM2Q13796 1616 aa25.4■■□□□ 1.66
TTC38-202ENST00000417709 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.66
TTC38-202ENST00000417709 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
TTC38-202ENST00000417709 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms