RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 SOGA1O94964 1423 aa8.88□□□□□ -0.99
NPHP1-204ENST00000417665 CHMP7Q8WUX9 453 aaPredicted RBP8.88□□□□□ -0.99
NPHP1-204ENST00000417665 SYNJ2O15056 1496 aa8.87□□□□□ -0.99
NPHP1-204ENST00000417665 CLSPNQ9HAW4 1339 aa8.86□□□□□ -0.99
NPHP1-204ENST00000417665 GRIN2BQ13224 1484 aa8.86□□□□□ -0.99
NPHP1-204ENST00000417665 PRKCSHP14314 528 aaPredicted RBP8.84□□□□□ -0.99
NPHP1-204ENST00000417665 POTEDQ86YR6 584 aa8.84□□□□□ -0.99
NPHP1-204ENST00000417665 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
NPHP1-204ENST00000417665 CCER1Q8TC90 406 aaPredicted RBP8.83□□□□□ -1
NPHP1-204ENST00000417665 ERICH6Q7L0X2 663 aa8.82□□□□□ -1
NPHP1-204ENST00000417665 PPP6R1Q9UPN7 881 aa8.81□□□□□ -1
NPHP1-204ENST00000417665 ERCC6L2Q5T890 1561 aa8.8□□□□□ -1
NPHP1-204ENST00000417665 KIF13AQ9H1H9 1805 aa8.8□□□□□ -1
NPHP1-204ENST00000417665 ILDR1Q86SU0 546 aaPredicted RBP8.79□□□□□ -1
NPHP1-204ENST00000417665 PBRM1Q86U86 1689 aa8.79□□□□□ -1
NPHP1-204ENST00000417665 CUX1P39880 1505 aa8.79□□□□□ -1
NPHP1-204ENST00000417665 ZNF316A6NFI3 1004 aaPredicted RBP8.77□□□□□ -1.01
NPHP1-204ENST00000417665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.77□□□□□ -1.01
NPHP1-204ENST00000417665 CEP170Q5SW79 1584 aa8.76□□□□□ -1.01
NPHP1-204ENST00000417665 YTHDC1Q96MU7 727 aaKnown RBP8.76□□□□□ -1.01
NPHP1-204ENST00000417665 EHMT2Q96KQ7 1210 aa8.75□□□□□ -1.01
NPHP1-204ENST00000417665 ABCA5Q8WWZ7 1642 aa8.75□□□□□ -1.01
NPHP1-204ENST00000417665 NUP160Q12769 1436 aa8.75□□□□□ -1.01
NPHP1-204ENST00000417665 SHROOM2Q13796 1616 aa8.74□□□□□ -1.01
NPHP1-204ENST00000417665 KCNA4P22459 653 aa8.74□□□□□ -1.01
NPHP1-204ENST00000417665 CSRNP3Q8WYN3 585 aa8.74□□□□□ -1.01
NPHP1-204ENST00000417665 GRIN2AQ12879 1464 aa8.74□□□□□ -1.01
NPHP1-204ENST00000417665 KDM4FA0A1W2PPD8 638 aa8.74□□□□□ -1.01
NPHP1-204ENST00000417665 ABCA10Q8WWZ4 1543 aa8.73□□□□□ -1.01
NPHP1-204ENST00000417665 FOXD1Q16676 465 aa8.73□□□□□ -1.01
NPHP1-204ENST00000417665 TSHZ2Q9NRE2 1034 aa8.72□□□□□ -1.01
NPHP1-204ENST00000417665 ABCC10Q5T3U5 1492 aa8.71□□□□□ -1.02
NPHP1-204ENST00000417665 ADAMTS12P58397 1594 aa8.7□□□□□ -1.02
NPHP1-204ENST00000417665 SUPT16HQ9Y5B9 1047 aaKnown RBP8.69□□□□□ -1.02
NPHP1-204ENST00000417665 MAPKBP1O60336 1514 aa8.68□□□□□ -1.02
NPHP1-204ENST00000417665 FAM69CQ0P6D2 419 aa8.68□□□□□ -1.02
NPHP1-204ENST00000417665 MIER1Q8N108 512 aa8.68□□□□□ -1.02
NPHP1-204ENST00000417665 DIP2BQ9P265 1576 aa8.67□□□□□ -1.02
NPHP1-204ENST00000417665 FHAD1B1AJZ9 1412 aa8.66□□□□□ -1.02
NPHP1-204ENST00000417665 KDM6BO15054 1643 aa8.66□□□□□ -1.02
NPHP1-204ENST00000417665 PRG4Q92954 1404 aaPredicted RBP8.65□□□□□ -1.02
NPHP1-204ENST00000417665 APLP2Q06481 763 aa8.65□□□□□ -1.02
NPHP1-204ENST00000417665 ADCY10Q96PN6 1610 aa8.62□□□□□ -1.03
NPHP1-204ENST00000417665 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
NPHP1-204ENST00000417665 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
NPHP1-204ENST00000417665 WRNQ14191 1432 aaPredicted RBP eCLIP8.61□□□□□ -1.03
NPHP1-204ENST00000417665 NPM1P06748 294 aaKnown RBP eCLIP8.6□□□□□ -1.03
NPHP1-204ENST00000417665 TSPOAP1O95153 1857 aa8.6□□□□□ -1.03
NPHP1-204ENST00000417665 RUSC2Q8N2Y8 1516 aa8.59□□□□□ -1.04
NPHP1-204ENST00000417665 ADGRL1O94910 1474 aa8.58□□□□□ -1.04
NPHP1-204ENST00000417665 HECW2Q9P2P5 1572 aa8.57□□□□□ -1.04
NPHP1-204ENST00000417665 MYT1LQ9UL68 1186 aa8.57□□□□□ -1.04
NPHP1-204ENST00000417665 BIVM-ERCC5R4GMW8 1640 aa8.56□□□□□ -1.04
NPHP1-204ENST00000417665 TOP2BQ02880 1626 aa8.56□□□□□ -1.04
NPHP1-204ENST00000417665 PPRC1Q5VV67 1664 aaKnown RBP8.55□□□□□ -1.04
NPHP1-204ENST00000417665 GLI2P10070 1586 aa8.53□□□□□ -1.04
NPHP1-204ENST00000417665 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
NPHP1-204ENST00000417665 KIAA0586Q9BVV6 1533 aa8.51□□□□□ -1.05
NPHP1-204ENST00000417665 FBXO41Q8TF61 875 aa8.5□□□□□ -1.05
NPHP1-204ENST00000417665 RBM19Q9Y4C8 960 aaKnown RBP8.5□□□□□ -1.05
NPHP1-204ENST00000417665 ASXL2Q76L83 1435 aa8.49□□□□□ -1.05
NPHP1-204ENST00000417665 PLB1Q6P1J6 1458 aa8.49□□□□□ -1.05
NPHP1-204ENST00000417665 ABCC2Q92887 1545 aa8.49□□□□□ -1.05
NPHP1-204ENST00000417665 PTPRGP23470 1445 aa8.48□□□□□ -1.05
NPHP1-204ENST00000417665 MAP3K4Q9Y6R4 1608 aa8.46□□□□□ -1.05
NPHP1-204ENST00000417665 UHRF1BP1LA0JNW5 1464 aa8.46□□□□□ -1.06
NPHP1-204ENST00000417665 EPRSP07814 1512 aaKnown RBP8.44□□□□□ -1.06
NPHP1-204ENST00000417665 TEX14Q8IWB6 1497 aa8.44□□□□□ -1.06
NPHP1-204ENST00000417665 TNIKQ9UKE5 1360 aa8.44□□□□□ -1.06
NPHP1-204ENST00000417665 CUL7Q14999 1698 aa8.43□□□□□ -1.06
NPHP1-204ENST00000417665 FANCIQ9NVI1 1328 aa8.43□□□□□ -1.06
NPHP1-204ENST00000417665 ERICH6BQ5W0A0 696 aa8.43□□□□□ -1.06
NPHP1-204ENST00000417665 IGF1RP08069 1367 aa8.42□□□□□ -1.06
NPHP1-204ENST00000417665 KDM5BQ9UGL1 1544 aa8.41□□□□□ -1.06
NPHP1-204ENST00000417665 MSH5O43196 834 aa8.41□□□□□ -1.06
NPHP1-204ENST00000417665 CARMIL2Q6F5E8 1435 aa8.41□□□□□ -1.06
NPHP1-204ENST00000417665 UACAQ9BZF9 1416 aa8.41□□□□□ -1.06
NPHP1-204ENST00000417665 NEFLP07196 543 aa8.39□□□□□ -1.07
NPHP1-204ENST00000417665 FKBP8Q14318 412 aa8.39□□□□□ -1.07
NPHP1-204ENST00000417665 DEKP35659 375 aaKnown RBP8.38□□□□□ -1.07
NPHP1-204ENST00000417665 BCANQ96GW7 911 aa8.38□□□□□ -1.07
NPHP1-204ENST00000417665 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
NPHP1-204ENST00000417665 ZCCHC11Q5TAX3 1644 aaKnown RBP8.37□□□□□ -1.07
NPHP1-204ENST00000417665 DISP1Q96F81 1524 aa8.37□□□□□ -1.07
NPHP1-204ENST00000417665 IQGAP2Q13576 1575 aa8.36□□□□□ -1.07
NPHP1-204ENST00000417665 KIF27Q86VH2 1401 aa8.36□□□□□ -1.07
NPHP1-204ENST00000417665 PPP4R3CPQ6ZMV5 832 aa8.36□□□□□ -1.07
NPHP1-204ENST00000417665 PIAS4Q8N2W9 510 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-204ENST00000417665 MAGI3Q5TCQ9 1506 aa8.36□□□□□ -1.07
NPHP1-204ENST00000417665 LMTK3Q96Q04 1460 aa8.36□□□□□ -1.07
NPHP1-204ENST00000417665 WDR7Q9Y4E6 1490 aa8.35□□□□□ -1.07
NPHP1-204ENST00000417665 KIF21BO75037 1637 aa8.35□□□□□ -1.07
NPHP1-204ENST00000417665 UBE2Q2Q8WVN8 375 aa8.35□□□□□ -1.07
NPHP1-204ENST00000417665 SLC4A1APQ9BWU0 796 aaKnown RBP8.35□□□□□ -1.07
NPHP1-204ENST00000417665 CEP162Q5TB80 1403 aa8.35□□□□□ -1.07
NPHP1-204ENST00000417665 CARMIL1Q5VZK9 1371 aa8.34□□□□□ -1.07
NPHP1-204ENST00000417665 PTPRMP28827 1452 aa8.34□□□□□ -1.07
NPHP1-204ENST00000417665 ADAMTSL3P82987 1691 aa8.34□□□□□ -1.08
NPHP1-204ENST00000417665 CFAP43Q8NDM7 1665 aa8.33□□□□□ -1.08
NPHP1-204ENST00000417665 CD109Q6YHK3 1445 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms