RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 NISCHQ9Y2I1 1504 aa12.12□□□□□ -0.47
NPHP1-204ENST00000417665 CHIC1Q5VXU3 224 aa11.33□□□□□ -0.59
NPHP1-204ENST00000417665 ABCC9O60706 1549 aa11.3□□□□□ -0.6
NPHP1-204ENST00000417665 AEBP2Q6ZN18 517 aaPredicted RBP11.28□□□□□ -0.6
NPHP1-204ENST00000417665 CCDC180Q9P1Z9 1646 aa11.03□□□□□ -0.64
NPHP1-204ENST00000417665 DNAJC5BQ9UF47 199 aa10.92□□□□□ -0.66
NPHP1-204ENST00000417665 RB1CC1Q8TDY2 1594 aa10.64□□□□□ -0.71
NPHP1-204ENST00000417665 NACADO15069 1562 aa10.5□□□□□ -0.73
NPHP1-204ENST00000417665 PABPN1Q86U42 306 aaKnown RBP eCLIP10.46□□□□□ -0.74
NPHP1-204ENST00000417665 UNC13AQ9UPW8 1703 aa10.4□□□□□ -0.74
NPHP1-204ENST00000417665 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
NPHP1-204ENST00000417665 MYO15BQ96JP2 1530 aa10.28□□□□□ -0.76
NPHP1-204ENST00000417665 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.77
NPHP1-204ENST00000417665 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
NPHP1-204ENST00000417665 CECR2Q9BXF3 1484 aa10.23□□□□□ -0.77
NPHP1-204ENST00000417665 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.77
NPHP1-204ENST00000417665 SHROOM4Q9ULL8 1493 aa10.21□□□□□ -0.78
NPHP1-204ENST00000417665 PELP1Q8IZL8 1130 aaKnown RBP10.17□□□□□ -0.78
NPHP1-204ENST00000417665 EIF4G1Q04637 1599 aaKnown RBP10.12□□□□□ -0.79
NPHP1-204ENST00000417665 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
NPHP1-204ENST00000417665 DCAF1Q9Y4B6 1507 aa10.02□□□□□ -0.8
NPHP1-204ENST00000417665 HRCP23327 699 aa9.99□□□□□ -0.81
NPHP1-204ENST00000417665 SCRIBQ14160 1630 aa9.99□□□□□ -0.81
NPHP1-204ENST00000417665 ZCCHC6Q5VYS8 1495 aaKnown RBP9.99□□□□□ -0.81
NPHP1-204ENST00000417665 MYT1Q01538 1121 aa9.91□□□□□ -0.82
NPHP1-204ENST00000417665 CUX2O14529 1486 aa9.91□□□□□ -0.82
NPHP1-204ENST00000417665 ERCC6Q03468 1493 aa9.77□□□□□ -0.84
NPHP1-204ENST00000417665 NCAPD3P42695 1498 aa9.71□□□□□ -0.86
NPHP1-204ENST00000417665 NESP48681 1621 aa9.63□□□□□ -0.87
NPHP1-204ENST00000417665 PPARGC1BQ86YN6 1023 aaKnown RBP9.62□□□□□ -0.87
NPHP1-204ENST00000417665 ATAD2BQ9ULI0 1458 aa9.62□□□□□ -0.87
NPHP1-204ENST00000417665 THOC2Q8NI27 1593 aaKnown RBP9.62□□□□□ -0.87
NPHP1-204ENST00000417665 TRIM41Q8WV44 630 aa9.62□□□□□ -0.87
NPHP1-204ENST00000417665 HMGXB3Q12766 1538 aa9.6□□□□□ -0.87
NPHP1-204ENST00000417665 PCGF6Q9BYE7 350 aa9.58□□□□□ -0.88
NPHP1-204ENST00000417665 SMARCA2P51531 1590 aa9.57□□□□□ -0.88
NPHP1-204ENST00000417665 SCAF1Q9H7N4 1312 aaKnown RBP9.53□□□□□ -0.88
NPHP1-204ENST00000417665 LAMC3Q9Y6N6 1575 aa9.52□□□□□ -0.88
NPHP1-204ENST00000417665 SMARCA4P51532 1647 aa9.52□□□□□ -0.89
NPHP1-204ENST00000417665 KIF21AQ7Z4S6 1674 aa9.5□□□□□ -0.89
NPHP1-204ENST00000417665 BAZ1BQ9UIG0 1483 aaKnown RBP9.49□□□□□ -0.89
NPHP1-204ENST00000417665 PDS5BQ9NTI5 1447 aa9.46□□□□□ -0.89
NPHP1-204ENST00000417665 PEG3Q9GZU2 1588 aa9.46□□□□□ -0.9
NPHP1-204ENST00000417665 BAZ1AQ9NRL2 1556 aaPredicted RBP9.42□□□□□ -0.9
NPHP1-204ENST00000417665 MRC2Q9UBG0 1479 aa9.42□□□□□ -0.9
NPHP1-204ENST00000417665 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
NPHP1-204ENST00000417665 WDR62O43379 1518 aa9.41□□□□□ -0.9
NPHP1-204ENST00000417665 TTBK1Q5TCY1 1321 aaPredicted RBP9.4□□□□□ -0.9
NPHP1-204ENST00000417665 PLPPR3Q6T4P5 718 aa9.38□□□□□ -0.91
NPHP1-204ENST00000417665 CADPSQ9ULU8 1353 aa9.38□□□□□ -0.91
NPHP1-204ENST00000417665 OSCARQ8IYS5 282 aa9.37□□□□□ -0.91
NPHP1-204ENST00000417665 SENP3Q9H4L4 574 aaPredicted RBP9.37□□□□□ -0.91
NPHP1-204ENST00000417665 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
NPHP1-204ENST00000417665 TRIM26Q12899 539 aaPredicted RBP9.31□□□□□ -0.92
NPHP1-204ENST00000417665 RIMBP3CA6NJZ7 1639 aa9.3□□□□□ -0.92
NPHP1-204ENST00000417665 RIMBP3BA6NNM3 1639 aa9.3□□□□□ -0.92
NPHP1-204ENST00000417665 RIMBP3Q9UFD9 1639 aa9.3□□□□□ -0.92
NPHP1-204ENST00000417665 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
NPHP1-204ENST00000417665 SUPT5HO00267 1087 aaKnown RBP9.29□□□□□ -0.92
NPHP1-204ENST00000417665 ACIN1Q9UKV3 1341 aaKnown RBP9.29□□□□□ -0.92
NPHP1-204ENST00000417665 FANCD2Q9BXW9 1451 aa9.26□□□□□ -0.93
NPHP1-204ENST00000417665 ARHGEF11O15085 1522 aa9.24□□□□□ -0.93
NPHP1-204ENST00000417665 URB2Q14146 1524 aaKnown RBP9.22□□□□□ -0.93
NPHP1-204ENST00000417665 CFTRP13569 1480 aa9.21□□□□□ -0.93
NPHP1-204ENST00000417665 CENPBP07199 599 aaPredicted RBP9.19□□□□□ -0.94
NPHP1-204ENST00000417665 WIZO95785 1651 aa9.18□□□□□ -0.94
NPHP1-204ENST00000417665 NEUROD1Q13562 356 aa9.18□□□□□ -0.94
NPHP1-204ENST00000417665 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
NPHP1-204ENST00000417665 CYB5RLQ6IPT4 315 aa9.15□□□□□ -0.94
NPHP1-204ENST00000417665 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.94
NPHP1-204ENST00000417665 ARAP1Q96P48 1450 aa9.14□□□□□ -0.95
NPHP1-204ENST00000417665 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
NPHP1-204ENST00000417665 TRHP20396 242 aaPredicted RBP9.13□□□□□ -0.95
NPHP1-204ENST00000417665 RSF1Q96T23 1441 aaPredicted RBP9.09□□□□□ -0.95
NPHP1-204ENST00000417665 PRDM2Q13029 1718 aa9.09□□□□□ -0.95
NPHP1-204ENST00000417665 EIF4G3O43432 1585 aaKnown RBP9.08□□□□□ -0.96
NPHP1-204ENST00000417665 CHD1O14646 1710 aa9.07□□□□□ -0.96
NPHP1-204ENST00000417665 TOP2AP11388 1531 aaKnown RBP9.06□□□□□ -0.96
NPHP1-204ENST00000417665 TOPBP1Q92547 1522 aa9.06□□□□□ -0.96
NPHP1-204ENST00000417665 LOC105371045A0A1W2PR82 267 aa9.03□□□□□ -0.96
NPHP1-204ENST00000417665 BCL11AQ9H165 835 aa9.03□□□□□ -0.96
NPHP1-204ENST00000417665 ABCC8Q09428 1581 aa9.02□□□□□ -0.97
NPHP1-204ENST00000417665 AQRO60306 1485 aaKnown RBP eCLIP9.02□□□□□ -0.97
NPHP1-204ENST00000417665 TARBP1Q13395 1621 aaKnown RBP9.01□□□□□ -0.97
NPHP1-204ENST00000417665 DNMBPQ6XZF7 1577 aa9□□□□□ -0.97
NPHP1-204ENST00000417665 CLASP1Q7Z460 1538 aa8.99□□□□□ -0.97
NPHP1-204ENST00000417665 DIEXFQ68CQ4 756 aaKnown RBP8.97□□□□□ -0.97
NPHP1-204ENST00000417665 FBLN2P98095 1184 aa8.97□□□□□ -0.97
NPHP1-204ENST00000417665 CCDC88BA6NC98 1476 aa8.96□□□□□ -0.98
NPHP1-204ENST00000417665 POLA1P09884 1462 aaPredicted RBP8.95□□□□□ -0.98
NPHP1-204ENST00000417665 ADRA2BP18089 450 aa8.93□□□□□ -0.98
NPHP1-204ENST00000417665 SYNJ1O43426 1573 aa8.93□□□□□ -0.98
NPHP1-204ENST00000417665 ANP32EQ9BTT0 268 aa8.92□□□□□ -0.98
NPHP1-204ENST00000417665 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
NPHP1-204ENST00000417665 FAM9AQ8IZU1 332 aaPredicted RBP8.91□□□□□ -0.98
NPHP1-204ENST00000417665 WDR97A6NE52 1622 aa8.91□□□□□ -0.98
NPHP1-204ENST00000417665 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
NPHP1-204ENST00000417665 RAD54L2Q9Y4B4 1467 aa8.9□□□□□ -0.98
NPHP1-204ENST00000417665 TDRD9Q8NDG6 1382 aaKnown RBP8.9□□□□□ -0.98
NPHP1-204ENST00000417665 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms