RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 CUL7Q14999 1698 aa31.83■■■□□ 2.69
VPS16-204ENST00000417508 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
VPS16-204ENST00000417508 KIAA0586Q9BVV6 1533 aa31.76■■■□□ 2.68
VPS16-204ENST00000417508 CARMIL1Q5VZK9 1371 aa31.74■■■□□ 2.67
VPS16-204ENST00000417508 NPM1P06748 294 aaKnown RBP eCLIP31.56■■■□□ 2.64
VPS16-204ENST00000417508 CARMIL2Q6F5E8 1435 aa31.47■■■□□ 2.63
VPS16-204ENST00000417508 RAPGEF2Q9Y4G8 1499 aa31.46■■■□□ 2.63
VPS16-204ENST00000417508 PTPRGP23470 1445 aa31.43■■■□□ 2.62
VPS16-204ENST00000417508 IQGAP2Q13576 1575 aa31.43■■■□□ 2.62
VPS16-204ENST00000417508 TNIKQ9UKE5 1360 aa31.4■■■□□ 2.62
VPS16-204ENST00000417508 ADCY10Q96PN6 1610 aa31.39■■■□□ 2.62
VPS16-204ENST00000417508 MAPKBP1O60336 1514 aa31.38■■■□□ 2.61
VPS16-204ENST00000417508 KIF13AQ9H1H9 1805 aa31.36■■■□□ 2.61
VPS16-204ENST00000417508 ABCC10Q5T3U5 1492 aa31.33■■■□□ 2.61
VPS16-204ENST00000417508 FAM69CQ0P6D2 419 aa31.32■■■□□ 2.6
VPS16-204ENST00000417508 UGGT2Q9NYU1 1516 aa31.27■■■□□ 2.6
VPS16-204ENST00000417508 TTBK1Q5TCY1 1321 aaPredicted RBP31.25■■■□□ 2.59
VPS16-204ENST00000417508 DISP1Q96F81 1524 aa31.25■■■□□ 2.59
VPS16-204ENST00000417508 UHRF1BP1LA0JNW5 1464 aa31.2■■■□□ 2.58
VPS16-204ENST00000417508 ABCC2Q92887 1545 aa31.19■■■□□ 2.58
VPS16-204ENST00000417508 DIP2BQ9P265 1576 aa31.19■■■□□ 2.58
VPS16-204ENST00000417508 PRXQ9BXM0 1461 aa31.19■■■□□ 2.58
VPS16-204ENST00000417508 UACAQ9BZF9 1416 aa31.18■■■□□ 2.58
VPS16-204ENST00000417508 CTTNBP2Q8WZ74 1663 aa31.13■■■□□ 2.57
VPS16-204ENST00000417508 KIAA0556O60303 1618 aa31.11■■■□□ 2.57
VPS16-204ENST00000417508 GOLGA3Q08378 1498 aa31.09■■■□□ 2.57
VPS16-204ENST00000417508 PLB1Q6P1J6 1458 aa31.09■■■□□ 2.57
VPS16-204ENST00000417508 CSRNP3Q8WYN3 585 aa31.07■■■□□ 2.56
VPS16-204ENST00000417508 ASXL2Q76L83 1435 aa31.06■■■□□ 2.56
VPS16-204ENST00000417508 KDM5BQ9UGL1 1544 aa31.03■■■□□ 2.56
VPS16-204ENST00000417508 AEBP2Q6ZN18 517 aaPredicted RBP31■■■□□ 2.55
VPS16-204ENST00000417508 EEA1Q15075 1411 aa30.98■■■□□ 2.55
VPS16-204ENST00000417508 GLI2P10070 1586 aa30.97■■■□□ 2.55
VPS16-204ENST00000417508 TSPOAP1O95153 1857 aa30.97■■■□□ 2.55
VPS16-204ENST00000417508 FAM9AQ8IZU1 332 aaPredicted RBP30.96■■■□□ 2.55
VPS16-204ENST00000417508 ZCCHC11Q5TAX3 1644 aaKnown RBP30.9■■■□□ 2.54
VPS16-204ENST00000417508 KDM6BO15054 1643 aa30.87■■■□□ 2.53
VPS16-204ENST00000417508 EPRSP07814 1512 aaKnown RBP30.87■■■□□ 2.53
VPS16-204ENST00000417508 ABCA8O94911 1581 aa30.84■■■□□ 2.53
VPS16-204ENST00000417508 WDR7Q9Y4E6 1490 aa30.78■■■□□ 2.52
VPS16-204ENST00000417508 PPRC1Q5VV67 1664 aaKnown RBP30.77■■■□□ 2.52
VPS16-204ENST00000417508 P3H3Q8IVL6 736 aa30.76■■■□□ 2.51
VPS16-204ENST00000417508 MAP3K4Q9Y6R4 1608 aa30.75■■■□□ 2.51
VPS16-204ENST00000417508 TEX14Q8IWB6 1497 aa30.73■■■□□ 2.51
VPS16-204ENST00000417508 SAMD9Q5K651 1589 aa30.71■■■□□ 2.51
VPS16-204ENST00000417508 KCNH8Q96L42 1107 aa30.67■■■□□ 2.5
VPS16-204ENST00000417508 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
VPS16-204ENST00000417508 KIF21BO75037 1637 aa30.63■■■□□ 2.49
VPS16-204ENST00000417508 ATP10BO94823 1461 aa30.62■■■□□ 2.49
VPS16-204ENST00000417508 CD109Q6YHK3 1445 aa30.61■■■□□ 2.49
VPS16-204ENST00000417508 CFAP43Q8NDM7 1665 aa30.59■■■□□ 2.49
VPS16-204ENST00000417508 MAGI3Q5TCQ9 1506 aa30.58■■■□□ 2.49
VPS16-204ENST00000417508 COL17A1Q9UMD9 1497 aaPredicted RBP30.57■■■□□ 2.48
VPS16-204ENST00000417508 RANGAP1P46060 587 aaPredicted RBP30.56■■■□□ 2.48
VPS16-204ENST00000417508 RAPGEF6Q8TEU7 1601 aa30.55■■■□□ 2.48
VPS16-204ENST00000417508 ARID3CA6NKF2 412 aa30.54■■■□□ 2.48
VPS16-204ENST00000417508 KDM4FA0A1W2PPD8 638 aa30.5■■■□□ 2.47
VPS16-204ENST00000417508 FHOD3Q2V2M9 1422 aa30.49■■■□□ 2.47
VPS16-204ENST00000417508 EFCAB5A4FU69 1503 aa30.49■■■□□ 2.47
VPS16-204ENST00000417508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.48■■■□□ 2.47
VPS16-204ENST00000417508 HNRNPUL2Q1KMD3 747 aaKnown RBP30.48■■■□□ 2.47
VPS16-204ENST00000417508 UBTFP17480 764 aaKnown RBP30.46■■■□□ 2.47
VPS16-204ENST00000417508 NUP153P49790 1475 aaKnown RBP30.44■■■□□ 2.46
VPS16-204ENST00000417508 PHLDB1Q86UU1 1377 aa30.41■■■□□ 2.46
VPS16-204ENST00000417508 ABCA9Q8IUA7 1624 aa30.4■■■□□ 2.46
VPS16-204ENST00000417508 PLEKHD1A6NEE1 506 aa30.39■■■□□ 2.46
VPS16-204ENST00000417508 ARAP3Q8WWN8 1544 aa30.35■■■□□ 2.45
VPS16-204ENST00000417508 EHMT2Q96KQ7 1210 aa30.32■■■□□ 2.44
VPS16-204ENST00000417508 ADGRL1O94910 1474 aa30.27■■■□□ 2.44
VPS16-204ENST00000417508 FMN1Q68DA7 1419 aa30.27■■■□□ 2.44
VPS16-204ENST00000417508 NEO1Q92859 1461 aa30.26■■■□□ 2.44
VPS16-204ENST00000417508 ARHGAP35Q9NRY4 1499 aa30.21■■■□□ 2.43
VPS16-204ENST00000417508 CDK11AQ9UQ88 783 aaPredicted RBP30.15■■■□□ 2.42
VPS16-204ENST00000417508 RAPGEF3O95398 923 aa30.14■■■□□ 2.42
VPS16-204ENST00000417508 ATP1B4Q9UN42 357 aaPredicted RBP30.14■■■□□ 2.42
VPS16-204ENST00000417508 CDK13Q14004 1512 aaKnown RBP30.12■■■□□ 2.41
VPS16-204ENST00000417508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.41
VPS16-204ENST00000417508 HECW1Q76N89 1606 aa30.11■■■□□ 2.41
VPS16-204ENST00000417508 AKNAQ7Z591 1439 aa30.07■■■□□ 2.4
VPS16-204ENST00000417508 FANCAO15360 1455 aa30.06■■■□□ 2.4
VPS16-204ENST00000417508 CFAP74Q9C0B2 1584 aa30.06■■■□□ 2.4
VPS16-204ENST00000417508 DENND4BO75064 1496 aaPredicted RBP30.04■■■□□ 2.4
VPS16-204ENST00000417508 TTC37Q6PGP7 1564 aa30.02■■■□□ 2.4
VPS16-204ENST00000417508 PLCH2O75038 1416 aa30■■■□□ 2.39
VPS16-204ENST00000417508 FRMPD1Q5SYB0 1578 aa29.98■■■□□ 2.39
VPS16-204ENST00000417508 TROQ12816 1431 aaPredicted RBP29.95■■■□□ 2.38
VPS16-204ENST00000417508 RICTORQ6R327 1708 aa29.94■■■□□ 2.38
VPS16-204ENST00000417508 EFCAB2Q5VUJ9 269 aa29.94■■■□□ 2.38
VPS16-204ENST00000417508 CLIP1P30622 1438 aa29.93■■■□□ 2.38
VPS16-204ENST00000417508 CASKIN1Q8WXD9 1431 aa29.93■■■□□ 2.38
VPS16-204ENST00000417508 CCDC18Q5T9S5 1454 aa29.88■■■□□ 2.37
VPS16-204ENST00000417508 ARID4BQ4LE39 1312 aaPredicted RBP29.88■■■□□ 2.37
VPS16-204ENST00000417508 KIF14Q15058 1648 aa29.88■■■□□ 2.37
VPS16-204ENST00000417508 MYO5CQ9NQX4 1742 aa29.88■■■□□ 2.37
VPS16-204ENST00000417508 SCAPERQ9BY12 1400 aa29.88■■■□□ 2.37
VPS16-204ENST00000417508 MAGI2Q86UL8 1455 aa29.87■■■□□ 2.37
VPS16-204ENST00000417508 LRRIQ1Q96JM4 1722 aa29.86■■■□□ 2.37
VPS16-204ENST00000417508 ZMYM4Q5VZL5 1548 aa29.86■■■□□ 2.37
VPS16-204ENST00000417508 ARHGEF40Q8TER5 1519 aa29.85■■■□□ 2.37
VPS16-204ENST00000417508 ADAMTSL3P82987 1691 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms