RNA–Protein interactions for RNA: ENST00000416098.1

NXF4-202, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

BASIC

Gene NXF4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-202ENST00000416098 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
NXF4-202ENST00000416098 RNF25Q96BH1 459 aaPredicted RBP11.29□□□□□ -0.6
NXF4-202ENST00000416098 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
NXF4-202ENST00000416098 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
NXF4-202ENST00000416098 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
NXF4-202ENST00000416098 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
NXF4-202ENST00000416098 HS6ST3Q8IZP7 471 aa11.22□□□□□ -0.61
NXF4-202ENST00000416098 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
NXF4-202ENST00000416098 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
NXF4-202ENST00000416098 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
NXF4-202ENST00000416098 CHRM1P11229 460 aaPredicted RBP11.18□□□□□ -0.62
NXF4-202ENST00000416098 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
NXF4-202ENST00000416098 DNAJC5Q9H3Z4 198 aa11.14□□□□□ -0.63
NXF4-202ENST00000416098 PYGBP11216 843 aa11.12□□□□□ -0.63
NXF4-202ENST00000416098 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
NXF4-202ENST00000416098 CCDC180Q9P1Z9 1646 aa11.12□□□□□ -0.63
NXF4-202ENST00000416098 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
NXF4-202ENST00000416098 VGFO15240 615 aaPredicted RBP11.1□□□□□ -0.63
NXF4-202ENST00000416098 BCANQ96GW7 911 aa11.09□□□□□ -0.63
NXF4-202ENST00000416098 STK25O00506 426 aa11.08□□□□□ -0.64
NXF4-202ENST00000416098 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
NXF4-202ENST00000416098 SGIP1Q9BQI5 828 aa11.06□□□□□ -0.64
NXF4-202ENST00000416098 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
NXF4-202ENST00000416098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.04□□□□□ -0.64
NXF4-202ENST00000416098 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
NXF4-202ENST00000416098 ZFP91Q96JP5 570 aaPredicted RBP11.04□□□□□ -0.64
NXF4-202ENST00000416098 PRKAR2AP13861 404 aaKnown RBP11.02□□□□□ -0.65
NXF4-202ENST00000416098 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
NXF4-202ENST00000416098 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
NXF4-202ENST00000416098 FXR2P51116 673 aaKnown RBP eCLIP11□□□□□ -0.65
NXF4-202ENST00000416098 CCDC61Q9Y6R9 512 aa10.93□□□□□ -0.66
NXF4-202ENST00000416098 ZNF467Q7Z7K2 595 aaPredicted RBP10.93□□□□□ -0.66
NXF4-202ENST00000416098 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
NXF4-202ENST00000416098 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
NXF4-202ENST00000416098 PRKCSHP14314 528 aaPredicted RBP10.91□□□□□ -0.66
NXF4-202ENST00000416098 CHRDL2Q6WN34 429 aa10.91□□□□□ -0.66
NXF4-202ENST00000416098 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
NXF4-202ENST00000416098 PDAP1Q13442 181 aaKnown RBP10.87□□□□□ -0.67
NXF4-202ENST00000416098 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
NXF4-202ENST00000416098 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
NXF4-202ENST00000416098 PSEN1P49768 467 aa10.84□□□□□ -0.67
NXF4-202ENST00000416098 PAK3O75914 559 aaPredicted RBP10.82□□□□□ -0.68
NXF4-202ENST00000416098 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
NXF4-202ENST00000416098 KIF12Q96FN5 646 aa10.81□□□□□ -0.68
NXF4-202ENST00000416098 MAP3K13O43283 966 aa10.81□□□□□ -0.68
NXF4-202ENST00000416098 ABCC9O60706 1549 aa10.78□□□□□ -0.68
NXF4-202ENST00000416098 TPRNQ4KMQ1 711 aa10.78□□□□□ -0.68
NXF4-202ENST00000416098 MFRPQ9BY79 579 aa10.76□□□□□ -0.69
NXF4-202ENST00000416098 NBR1Q14596 966 aa10.75□□□□□ -0.69
NXF4-202ENST00000416098 ZRANB1Q9UGI0 708 aa10.74□□□□□ -0.69
NXF4-202ENST00000416098 CADPS2Q86UW7 1296 aa10.73□□□□□ -0.69
NXF4-202ENST00000416098 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
NXF4-202ENST00000416098 EFCAB3Q8N7B9 438 aa10.71□□□□□ -0.69
NXF4-202ENST00000416098 PHF12Q96QT6 1004 aa10.7□□□□□ -0.7
NXF4-202ENST00000416098 CABP2Q9NPB3 220 aa10.7□□□□□ -0.7
NXF4-202ENST00000416098 PPP1R37O75864 691 aa10.68□□□□□ -0.7
NXF4-202ENST00000416098 FBXO22Q8NEZ5 403 aa10.67□□□□□ -0.7
NXF4-202ENST00000416098 PHF8Q9UPP1 1060 aa10.66□□□□□ -0.7
NXF4-202ENST00000416098 SOX12O15370 315 aa10.65□□□□□ -0.7
NXF4-202ENST00000416098 NLRP6P59044 892 aa10.65□□□□□ -0.7
NXF4-202ENST00000416098 WDR70Q9NW82 654 aa10.61□□□□□ -0.71
NXF4-202ENST00000416098 C19orf67A6NJJ6 358 aa10.61□□□□□ -0.71
NXF4-202ENST00000416098 TRPC6Q9Y210 931 aa10.6□□□□□ -0.71
NXF4-202ENST00000416098 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
NXF4-202ENST00000416098 TMEM106CQ9BVX2 250 aa10.58□□□□□ -0.72
NXF4-202ENST00000416098 P3H3Q8IVL6 736 aa10.57□□□□□ -0.72
NXF4-202ENST00000416098 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
NXF4-202ENST00000416098 MS4A4AQ96JQ5 239 aa10.56□□□□□ -0.72
NXF4-202ENST00000416098 GOLGA2Q08379 1002 aa10.52□□□□□ -0.73
NXF4-202ENST00000416098 NCKAP5LQ9HCH0 1330 aa10.48□□□□□ -0.73
NXF4-202ENST00000416098 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
NXF4-202ENST00000416098 TTLL13PA6NNM8 815 aa10.47□□□□□ -0.73
NXF4-202ENST00000416098 TIE1P35590 1138 aa10.47□□□□□ -0.73
NXF4-202ENST00000416098 E2F4Q16254 413 aa10.46□□□□□ -0.74
NXF4-202ENST00000416098 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
NXF4-202ENST00000416098 PDE4AP27815 886 aa10.44□□□□□ -0.74
NXF4-202ENST00000416098 ARHGEF1Q92888 912 aaKnown RBP10.44□□□□□ -0.74
NXF4-202ENST00000416098 BMP2KQ9NSY1 1161 aaPredicted RBP10.44□□□□□ -0.74
NXF4-202ENST00000416098 RB1CC1Q8TDY2 1594 aa10.44□□□□□ -0.74
NXF4-202ENST00000416098 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
NXF4-202ENST00000416098 NACADO15069 1562 aa10.43□□□□□ -0.74
NXF4-202ENST00000416098 EVX2Q03828 476 aa10.42□□□□□ -0.74
NXF4-202ENST00000416098 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.42□□□□□ -0.74
NXF4-202ENST00000416098 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
NXF4-202ENST00000416098 CRISPLD2Q9H0B8 497 aa10.42□□□□□ -0.74
NXF4-202ENST00000416098 HAX1O00165 279 aa10.41□□□□□ -0.74
NXF4-202ENST00000416098 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.41□□□□□ -0.74
NXF4-202ENST00000416098 MFSD10Q14728 455 aa10.4□□□□□ -0.74
NXF4-202ENST00000416098 MYO15BQ96JP2 1530 aa10.39□□□□□ -0.75
NXF4-202ENST00000416098 TRIM35Q9UPQ4 493 aa10.39□□□□□ -0.75
NXF4-202ENST00000416098 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
NXF4-202ENST00000416098 DPY19L2Q6NUT2 758 aa10.36□□□□□ -0.75
NXF4-202ENST00000416098 DDX27Q96GQ7 796 aaKnown RBP10.36□□□□□ -0.75
NXF4-202ENST00000416098 ZCCHC6Q5VYS8 1495 aaKnown RBP10.36□□□□□ -0.75
NXF4-202ENST00000416098 SEMA3EO15041 775 aa10.36□□□□□ -0.75
NXF4-202ENST00000416098 DCAF1Q9Y4B6 1507 aa10.33□□□□□ -0.76
NXF4-202ENST00000416098 ATN1P54259 1190 aaPredicted RBP10.33□□□□□ -0.76
NXF4-202ENST00000416098 TESPA1A2RU30 521 aaPredicted RBP10.32□□□□□ -0.76
NXF4-202ENST00000416098 CLCN6P51797 869 aa10.32□□□□□ -0.76
NXF4-202ENST00000416098 CAMK2BQ13554 666 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms