RNA–Protein interactions for RNA: ENST00000416098.1

NXF4-202, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

BASIC

Gene NXF4, Length 1,465 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-202ENST00000416098 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
NXF4-202ENST00000416098 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
NXF4-202ENST00000416098 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
NXF4-202ENST00000416098 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
NXF4-202ENST00000416098 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
NXF4-202ENST00000416098 FOXD1Q16676 465 aa16.15■□□□□ 0.18
NXF4-202ENST00000416098 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.14
NXF4-202ENST00000416098 ADRA2BP18089 450 aa15.95■□□□□ 0.14
NXF4-202ENST00000416098 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
NXF4-202ENST00000416098 KCNA4P22459 653 aa15.22■□□□□ 0.03
NXF4-202ENST00000416098 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
NXF4-202ENST00000416098 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
NXF4-202ENST00000416098 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
NXF4-202ENST00000416098 MSH5O43196 834 aa14.63□□□□□ -0.07
NXF4-202ENST00000416098 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
NXF4-202ENST00000416098 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
NXF4-202ENST00000416098 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
NXF4-202ENST00000416098 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
NXF4-202ENST00000416098 MAPK8IP2Q13387 824 aaPredicted RBP14.36□□□□□ -0.11
NXF4-202ENST00000416098 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
NXF4-202ENST00000416098 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
NXF4-202ENST00000416098 ZBTB22O15209 634 aa14.04□□□□□ -0.16
NXF4-202ENST00000416098 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
NXF4-202ENST00000416098 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
NXF4-202ENST00000416098 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
NXF4-202ENST00000416098 FOXD4L1Q9NU39 408 aa13.81□□□□□ -0.2
NXF4-202ENST00000416098 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
NXF4-202ENST00000416098 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
NXF4-202ENST00000416098 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
NXF4-202ENST00000416098 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
NXF4-202ENST00000416098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
NXF4-202ENST00000416098 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
NXF4-202ENST00000416098 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
NXF4-202ENST00000416098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
NXF4-202ENST00000416098 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
NXF4-202ENST00000416098 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
NXF4-202ENST00000416098 FKBP8Q14318 412 aa12.9□□□□□ -0.34
NXF4-202ENST00000416098 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
NXF4-202ENST00000416098 APLP2Q06481 763 aa12.72□□□□□ -0.37
NXF4-202ENST00000416098 POTEDQ86YR6 584 aa12.63□□□□□ -0.39
NXF4-202ENST00000416098 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
NXF4-202ENST00000416098 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
NXF4-202ENST00000416098 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
NXF4-202ENST00000416098 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
NXF4-202ENST00000416098 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
NXF4-202ENST00000416098 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
NXF4-202ENST00000416098 CAPN15O75808 1086 aa12.48□□□□□ -0.41
NXF4-202ENST00000416098 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
NXF4-202ENST00000416098 POLA2Q14181 598 aa12.47□□□□□ -0.41
NXF4-202ENST00000416098 NISCHQ9Y2I1 1504 aa12.44□□□□□ -0.42
NXF4-202ENST00000416098 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
NXF4-202ENST00000416098 FBLN2P98095 1184 aa12.4□□□□□ -0.43
NXF4-202ENST00000416098 ABCB7O75027 752 aa12.32□□□□□ -0.44
NXF4-202ENST00000416098 PROM2Q8N271 834 aa12.29□□□□□ -0.44
NXF4-202ENST00000416098 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
NXF4-202ENST00000416098 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
NXF4-202ENST00000416098 DSG3P32926 999 aa12.19□□□□□ -0.46
NXF4-202ENST00000416098 SLC24A1O60721 1099 aa12.1□□□□□ -0.47
NXF4-202ENST00000416098 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
NXF4-202ENST00000416098 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.48
NXF4-202ENST00000416098 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.48
NXF4-202ENST00000416098 OSCARQ8IYS5 282 aa12.02□□□□□ -0.49
NXF4-202ENST00000416098 SPDYE2BA6NHP3 402 aa11.96□□□□□ -0.49
NXF4-202ENST00000416098 SPDYE6P0CI01 402 aa11.96□□□□□ -0.49
NXF4-202ENST00000416098 SPDYE2Q495Y8 402 aa11.96□□□□□ -0.49
NXF4-202ENST00000416098 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
NXF4-202ENST00000416098 SSUH2Q9Y2M2 353 aa11.95□□□□□ -0.5
NXF4-202ENST00000416098 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
NXF4-202ENST00000416098 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
NXF4-202ENST00000416098 PKD2Q13563 968 aa11.8□□□□□ -0.52
NXF4-202ENST00000416098 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
NXF4-202ENST00000416098 SPOCK2Q92563 424 aa11.76□□□□□ -0.53
NXF4-202ENST00000416098 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
NXF4-202ENST00000416098 MIER1Q8N108 512 aa11.73□□□□□ -0.53
NXF4-202ENST00000416098 DCAF8L2P0C7V8 631 aa11.68□□□□□ -0.54
NXF4-202ENST00000416098 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
NXF4-202ENST00000416098 ECM2O94769 699 aaPredicted RBP11.61□□□□□ -0.55
NXF4-202ENST00000416098 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
NXF4-202ENST00000416098 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
NXF4-202ENST00000416098 AKT1S1Q96B36 256 aa11.52□□□□□ -0.56
NXF4-202ENST00000416098 RBM42Q9BTD8 480 aaKnown RBP11.52□□□□□ -0.56
NXF4-202ENST00000416098 RGL2O15211 777 aa11.51□□□□□ -0.57
NXF4-202ENST00000416098 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
NXF4-202ENST00000416098 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
NXF4-202ENST00000416098 NPM1P06748 294 aaKnown RBP eCLIP11.49□□□□□ -0.57
NXF4-202ENST00000416098 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
NXF4-202ENST00000416098 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
NXF4-202ENST00000416098 CLEC11AQ9Y240 323 aa11.44□□□□□ -0.58
NXF4-202ENST00000416098 BBXQ8WY36 941 aaPredicted RBP11.43□□□□□ -0.58
NXF4-202ENST00000416098 PRR29P0C7W0 189 aa11.41□□□□□ -0.58
NXF4-202ENST00000416098 NUBP1P53384 320 aa11.4□□□□□ -0.58
NXF4-202ENST00000416098 CREBZFQ9NS37 354 aa11.4□□□□□ -0.58
NXF4-202ENST00000416098 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.38□□□□□ -0.59
NXF4-202ENST00000416098 MNX1P50219 401 aaPredicted RBP11.35□□□□□ -0.59
NXF4-202ENST00000416098 GSE1Q14687 1217 aa11.35□□□□□ -0.59
NXF4-202ENST00000416098 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
NXF4-202ENST00000416098 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
NXF4-202ENST00000416098 CHGAP10645 457 aaKnown RBP11.32□□□□□ -0.6
NXF4-202ENST00000416098 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
NXF4-202ENST00000416098 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms