RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 UBTFP17480 764 aaKnown RBP23.53■■□□□ 1.36
SGCE-202ENST00000415788 IQGAP2Q13576 1575 aa23.51■■□□□ 1.35
SGCE-202ENST00000415788 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
SGCE-202ENST00000415788 CTTNBP2Q8WZ74 1663 aa23.5■■□□□ 1.35
SGCE-202ENST00000415788 JPH4Q96JJ6 628 aa23.47■■□□□ 1.35
SGCE-202ENST00000415788 SHROOM2Q13796 1616 aa23.45■■□□□ 1.34
SGCE-202ENST00000415788 TNIKQ9UKE5 1360 aa23.43■■□□□ 1.34
SGCE-202ENST00000415788 UGGT2Q9NYU1 1516 aa23.41■■□□□ 1.34
SGCE-202ENST00000415788 LOC105371045A0A1W2PR82 267 aa23.39■■□□□ 1.34
SGCE-202ENST00000415788 DNAJC5Q9H3Z4 198 aa23.39■■□□□ 1.33
SGCE-202ENST00000415788 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
SGCE-202ENST00000415788 CARMIL2Q6F5E8 1435 aa23.36■■□□□ 1.33
SGCE-202ENST00000415788 ARHGEF11O15085 1522 aa23.33■■□□□ 1.32
SGCE-202ENST00000415788 DISP1Q96F81 1524 aa23.3■■□□□ 1.32
SGCE-202ENST00000415788 EFCAB5A4FU69 1503 aa23.29■■□□□ 1.32
SGCE-202ENST00000415788 KIAA0556O60303 1618 aa23.27■■□□□ 1.32
SGCE-202ENST00000415788 RANGAP1P46060 587 aaPredicted RBP23.26■■□□□ 1.31
SGCE-202ENST00000415788 SAMD9Q5K651 1589 aa23.26■■□□□ 1.31
SGCE-202ENST00000415788 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
SGCE-202ENST00000415788 RIMBP3CA6NJZ7 1639 aa23.24■■□□□ 1.31
SGCE-202ENST00000415788 RIMBP3BA6NNM3 1639 aa23.24■■□□□ 1.31
SGCE-202ENST00000415788 RIMBP3Q9UFD9 1639 aa23.24■■□□□ 1.31
SGCE-202ENST00000415788 CLIP1P30622 1438 aa23.22■■□□□ 1.31
SGCE-202ENST00000415788 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
SGCE-202ENST00000415788 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
SGCE-202ENST00000415788 PTPRGP23470 1445 aa23.17■■□□□ 1.3
SGCE-202ENST00000415788 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
SGCE-202ENST00000415788 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
SGCE-202ENST00000415788 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.29
SGCE-202ENST00000415788 CYB5RLQ6IPT4 315 aa23.09■■□□□ 1.29
SGCE-202ENST00000415788 FMN1Q68DA7 1419 aa23.08■■□□□ 1.28
SGCE-202ENST00000415788 TTBK1Q5TCY1 1321 aaPredicted RBP23.07■■□□□ 1.28
SGCE-202ENST00000415788 UACAQ9BZF9 1416 aa23.03■■□□□ 1.28
SGCE-202ENST00000415788 UHRF1BP1LA0JNW5 1464 aa23■■□□□ 1.27
SGCE-202ENST00000415788 PLB1Q6P1J6 1458 aa23■■□□□ 1.27
SGCE-202ENST00000415788 ABCA8O94911 1581 aa22.99■■□□□ 1.27
SGCE-202ENST00000415788 ABCC2Q92887 1545 aa22.97■■□□□ 1.27
SGCE-202ENST00000415788 RAPGEF6Q8TEU7 1601 aa22.94■■□□□ 1.26
SGCE-202ENST00000415788 ADCY10Q96PN6 1610 aa22.93■■□□□ 1.26
SGCE-202ENST00000415788 VPS8Q8N3P4 1428 aa22.93■■□□□ 1.26
SGCE-202ENST00000415788 CASKIN1Q8WXD9 1431 aa22.92■■□□□ 1.26
SGCE-202ENST00000415788 FYCO1Q9BQS8 1478 aa22.89■■□□□ 1.26
SGCE-202ENST00000415788 HECW1Q76N89 1606 aa22.88■■□□□ 1.25
SGCE-202ENST00000415788 NUP153P49790 1475 aaKnown RBP22.88■■□□□ 1.25
SGCE-202ENST00000415788 NPM1P06748 294 aaKnown RBP eCLIP22.88■■□□□ 1.25
SGCE-202ENST00000415788 PCF11O94913 1555 aaKnown RBP22.87■■□□□ 1.25
SGCE-202ENST00000415788 KDM5BQ9UGL1 1544 aa22.87■■□□□ 1.25
SGCE-202ENST00000415788 ATP1B4Q9UN42 357 aaPredicted RBP22.84■■□□□ 1.25
SGCE-202ENST00000415788 ATP10BO94823 1461 aa22.81■■□□□ 1.24
SGCE-202ENST00000415788 EPRSP07814 1512 aaKnown RBP22.8■■□□□ 1.24
SGCE-202ENST00000415788 CCDC18Q5T9S5 1454 aa22.8■■□□□ 1.24
SGCE-202ENST00000415788 ZCCHC11Q5TAX3 1644 aaKnown RBP22.78■■□□□ 1.24
SGCE-202ENST00000415788 ARID3CA6NKF2 412 aa22.77■■□□□ 1.24
SGCE-202ENST00000415788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
SGCE-202ENST00000415788 HNRNPUL2Q1KMD3 747 aaKnown RBP22.76■■□□□ 1.23
SGCE-202ENST00000415788 MAPKBP1O60336 1514 aa22.75■■□□□ 1.23
SGCE-202ENST00000415788 CDK13Q14004 1512 aaKnown RBP22.74■■□□□ 1.23
SGCE-202ENST00000415788 HRCP23327 699 aa22.73■■□□□ 1.23
SGCE-202ENST00000415788 CDK11AQ9UQ88 783 aaPredicted RBP22.73■■□□□ 1.23
SGCE-202ENST00000415788 ASXL2Q76L83 1435 aa22.71■■□□□ 1.23
SGCE-202ENST00000415788 PLEKHD1A6NEE1 506 aa22.7■■□□□ 1.22
SGCE-202ENST00000415788 APLP2Q06481 763 aa22.69■■□□□ 1.22
SGCE-202ENST00000415788 MAP3K1Q13233 1512 aa22.69■■□□□ 1.22
SGCE-202ENST00000415788 WDR7Q9Y4E6 1490 aa22.68■■□□□ 1.22
SGCE-202ENST00000415788 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
SGCE-202ENST00000415788 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
SGCE-202ENST00000415788 CFAP43Q8NDM7 1665 aa22.63■■□□□ 1.21
SGCE-202ENST00000415788 TROQ12816 1431 aaPredicted RBP22.62■■□□□ 1.21
SGCE-202ENST00000415788 MTUS2Q5JR59 1369 aa22.6■■□□□ 1.21
SGCE-202ENST00000415788 ABCC10Q5T3U5 1492 aa22.59■■□□□ 1.21
SGCE-202ENST00000415788 MAGI3Q5TCQ9 1506 aa22.56■■□□□ 1.2
SGCE-202ENST00000415788 EHBP1L1Q8N3D4 1523 aa22.56■■□□□ 1.2
SGCE-202ENST00000415788 LRRC9Q6ZRR7 1453 aa22.56■■□□□ 1.2
SGCE-202ENST00000415788 KCNH8Q96L42 1107 aa22.56■■□□□ 1.2
SGCE-202ENST00000415788 DIP2BQ9P265 1576 aa22.54■■□□□ 1.2
SGCE-202ENST00000415788 GLI2P10070 1586 aa22.53■■□□□ 1.2
SGCE-202ENST00000415788 KIF14Q15058 1648 aa22.52■■□□□ 1.19
SGCE-202ENST00000415788 FAM69CQ0P6D2 419 aa22.51■■□□□ 1.19
SGCE-202ENST00000415788 KANK4Q5T7N3 995 aaPredicted RBP22.51■■□□□ 1.19
SGCE-202ENST00000415788 TRHP20396 242 aaPredicted RBP22.47■■□□□ 1.19
SGCE-202ENST00000415788 ABCA9Q8IUA7 1624 aa22.46■■□□□ 1.19
SGCE-202ENST00000415788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.46■■□□□ 1.19
SGCE-202ENST00000415788 SUPT6HQ7KZ85 1726 aaKnown RBP22.43■■□□□ 1.18
SGCE-202ENST00000415788 CD109Q6YHK3 1445 aa22.42■■□□□ 1.18
SGCE-202ENST00000415788 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
SGCE-202ENST00000415788 KIF13AQ9H1H9 1805 aa22.42■■□□□ 1.18
SGCE-202ENST00000415788 TTC37Q6PGP7 1564 aa22.4■■□□□ 1.18
SGCE-202ENST00000415788 MAP3K4Q9Y6R4 1608 aa22.4■■□□□ 1.18
SGCE-202ENST00000415788 CCNB3Q8WWL7 1395 aa22.38■■□□□ 1.17
SGCE-202ENST00000415788 PLCH2O75038 1416 aa22.37■■□□□ 1.17
SGCE-202ENST00000415788 ARAP3Q8WWN8 1544 aa22.35■■□□□ 1.17
SGCE-202ENST00000415788 GPATCH8Q9UKJ3 1502 aaKnown RBP22.34■■□□□ 1.17
SGCE-202ENST00000415788 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
SGCE-202ENST00000415788 MYO5CQ9NQX4 1742 aa22.32■■□□□ 1.16
SGCE-202ENST00000415788 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
SGCE-202ENST00000415788 PREX2Q70Z35 1606 aa22.3■■□□□ 1.16
SGCE-202ENST00000415788 MYOM3Q5VTT5 1437 aa22.3■■□□□ 1.16
SGCE-202ENST00000415788 ITSN2Q9NZM3 1697 aa22.29■■□□□ 1.16
SGCE-202ENST00000415788 EFCAB2Q5VUJ9 269 aa22.29■■□□□ 1.16
SGCE-202ENST00000415788 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms