RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
NCKIPSD-203ENST00000415281 CUL7Q14999 1698 aa21.81■■□□□ 1.08
NCKIPSD-203ENST00000415281 KIF13AQ9H1H9 1805 aa21.8■■□□□ 1.08
NCKIPSD-203ENST00000415281 KIAA0586Q9BVV6 1533 aa21.8■■□□□ 1.08
NCKIPSD-203ENST00000415281 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
NCKIPSD-203ENST00000415281 ADCY10Q96PN6 1610 aa21.73■■□□□ 1.07
NCKIPSD-203ENST00000415281 MAPKBP1O60336 1514 aa21.64■■□□□ 1.05
NCKIPSD-203ENST00000415281 ABCC10Q5T3U5 1492 aa21.63■■□□□ 1.05
NCKIPSD-203ENST00000415281 DIP2BQ9P265 1576 aa21.59■■□□□ 1.05
NCKIPSD-203ENST00000415281 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
NCKIPSD-203ENST00000415281 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
NCKIPSD-203ENST00000415281 PTPRGP23470 1445 aa21.56■■□□□ 1.04
NCKIPSD-203ENST00000415281 DISP1Q96F81 1524 aa21.56■■□□□ 1.04
NCKIPSD-203ENST00000415281 NPM1P06748 294 aaKnown RBP eCLIP21.54■■□□□ 1.04
NCKIPSD-203ENST00000415281 RAPGEF2Q9Y4G8 1499 aa21.53■■□□□ 1.04
NCKIPSD-203ENST00000415281 TNIKQ9UKE5 1360 aa21.53■■□□□ 1.04
NCKIPSD-203ENST00000415281 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
NCKIPSD-203ENST00000415281 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
NCKIPSD-203ENST00000415281 UGGT2Q9NYU1 1516 aa21.49■■□□□ 1.03
NCKIPSD-203ENST00000415281 ABCC2Q92887 1545 aa21.46■■□□□ 1.03
NCKIPSD-203ENST00000415281 UHRF1BP1LA0JNW5 1464 aa21.45■■□□□ 1.03
NCKIPSD-203ENST00000415281 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
NCKIPSD-203ENST00000415281 UACAQ9BZF9 1416 aa21.42■■□□□ 1.02
NCKIPSD-203ENST00000415281 KIAA0556O60303 1618 aa21.4■■□□□ 1.02
NCKIPSD-203ENST00000415281 PRXQ9BXM0 1461 aa21.39■■□□□ 1.02
NCKIPSD-203ENST00000415281 ASXL2Q76L83 1435 aa21.39■■□□□ 1.02
NCKIPSD-203ENST00000415281 PPRC1Q5VV67 1664 aaKnown RBP21.39■■□□□ 1.01
NCKIPSD-203ENST00000415281 CTTNBP2Q8WZ74 1663 aa21.38■■□□□ 1.01
NCKIPSD-203ENST00000415281 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
NCKIPSD-203ENST00000415281 KDM5BQ9UGL1 1544 aa21.37■■□□□ 1.01
NCKIPSD-203ENST00000415281 GLI2P10070 1586 aa21.36■■□□□ 1.01
NCKIPSD-203ENST00000415281 PLB1Q6P1J6 1458 aa21.33■■□□□ 1.01
NCKIPSD-203ENST00000415281 KDM6BO15054 1643 aa21.33■■□□□ 1
NCKIPSD-203ENST00000415281 ZCCHC11Q5TAX3 1644 aaKnown RBP21.33■■□□□ 1
NCKIPSD-203ENST00000415281 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
NCKIPSD-203ENST00000415281 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-203ENST00000415281 MAP3K4Q9Y6R4 1608 aa21.26■□□□□ 0.99
NCKIPSD-203ENST00000415281 ABCA8O94911 1581 aa21.25■□□□□ 0.99
NCKIPSD-203ENST00000415281 KDM4FA0A1W2PPD8 638 aa21.23■□□□□ 0.99
NCKIPSD-203ENST00000415281 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
NCKIPSD-203ENST00000415281 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
NCKIPSD-203ENST00000415281 WDR7Q9Y4E6 1490 aa21.16■□□□□ 0.98
NCKIPSD-203ENST00000415281 SAMD9Q5K651 1589 aa21.12■□□□□ 0.97
NCKIPSD-203ENST00000415281 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
NCKIPSD-203ENST00000415281 ATP10BO94823 1461 aa21.08■□□□□ 0.97
NCKIPSD-203ENST00000415281 CFAP43Q8NDM7 1665 aa21.06■□□□□ 0.96
NCKIPSD-203ENST00000415281 KCNH8Q96L42 1107 aa21.06■□□□□ 0.96
NCKIPSD-203ENST00000415281 TEX14Q8IWB6 1497 aa21.06■□□□□ 0.96
NCKIPSD-203ENST00000415281 MAGI3Q5TCQ9 1506 aa21.05■□□□□ 0.96
NCKIPSD-203ENST00000415281 CD109Q6YHK3 1445 aa21.04■□□□□ 0.96
NCKIPSD-203ENST00000415281 ARID3CA6NKF2 412 aa21.01■□□□□ 0.95
NCKIPSD-203ENST00000415281 EEA1Q15075 1411 aa21.01■□□□□ 0.95
NCKIPSD-203ENST00000415281 RAPGEF6Q8TEU7 1601 aa20.98■□□□□ 0.95
NCKIPSD-203ENST00000415281 FAM9AQ8IZU1 332 aaPredicted RBP20.98■□□□□ 0.95
NCKIPSD-203ENST00000415281 ADGRL1O94910 1474 aa20.97■□□□□ 0.95
NCKIPSD-203ENST00000415281 NUP153P49790 1475 aaKnown RBP20.94■□□□□ 0.94
NCKIPSD-203ENST00000415281 ABCA9Q8IUA7 1624 aa20.94■□□□□ 0.94
NCKIPSD-203ENST00000415281 KIF21BO75037 1637 aa20.93■□□□□ 0.94
NCKIPSD-203ENST00000415281 FHOD3Q2V2M9 1422 aa20.93■□□□□ 0.94
NCKIPSD-203ENST00000415281 RANGAP1P46060 587 aaPredicted RBP20.91■□□□□ 0.94
NCKIPSD-203ENST00000415281 ARAP3Q8WWN8 1544 aa20.89■□□□□ 0.94
NCKIPSD-203ENST00000415281 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
NCKIPSD-203ENST00000415281 EFCAB5A4FU69 1503 aa20.81■□□□□ 0.92
NCKIPSD-203ENST00000415281 FRMPD1Q5SYB0 1578 aa20.78■□□□□ 0.92
NCKIPSD-203ENST00000415281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.78■□□□□ 0.92
NCKIPSD-203ENST00000415281 RAPGEF3O95398 923 aa20.78■□□□□ 0.92
NCKIPSD-203ENST00000415281 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
NCKIPSD-203ENST00000415281 PHLDB1Q86UU1 1377 aa20.77■□□□□ 0.92
NCKIPSD-203ENST00000415281 NEO1Q92859 1461 aa20.76■□□□□ 0.91
NCKIPSD-203ENST00000415281 EHMT2Q96KQ7 1210 aa20.76■□□□□ 0.91
NCKIPSD-203ENST00000415281 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.75■□□□□ 0.91
NCKIPSD-203ENST00000415281 ARHGAP35Q9NRY4 1499 aa20.74■□□□□ 0.91
NCKIPSD-203ENST00000415281 CDK13Q14004 1512 aaKnown RBP20.73■□□□□ 0.91
NCKIPSD-203ENST00000415281 PLEKHD1A6NEE1 506 aa20.73■□□□□ 0.91
NCKIPSD-203ENST00000415281 TTC37Q6PGP7 1564 aa20.71■□□□□ 0.91
NCKIPSD-203ENST00000415281 RICTORQ6R327 1708 aa20.7■□□□□ 0.9
NCKIPSD-203ENST00000415281 HECW2Q9P2P5 1572 aa20.68■□□□□ 0.9
NCKIPSD-203ENST00000415281 ADAMTSL3P82987 1691 aa20.68■□□□□ 0.9
NCKIPSD-203ENST00000415281 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
NCKIPSD-203ENST00000415281 LRRIQ1Q96JM4 1722 aa20.67■□□□□ 0.9
NCKIPSD-203ENST00000415281 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
NCKIPSD-203ENST00000415281 FANCAO15360 1455 aa20.63■□□□□ 0.89
NCKIPSD-203ENST00000415281 SIGLEC1Q9BZZ2 1709 aa20.63■□□□□ 0.89
NCKIPSD-203ENST00000415281 DENND4BO75064 1496 aaPredicted RBP20.61■□□□□ 0.89
NCKIPSD-203ENST00000415281 BCORL1Q5H9F3 1711 aa20.61■□□□□ 0.89
NCKIPSD-203ENST00000415281 FMN1Q68DA7 1419 aa20.6■□□□□ 0.89
NCKIPSD-203ENST00000415281 HECW1Q76N89 1606 aa20.59■□□□□ 0.89
NCKIPSD-203ENST00000415281 PLCH2O75038 1416 aa20.59■□□□□ 0.89
NCKIPSD-203ENST00000415281 KIF14Q15058 1648 aa20.58■□□□□ 0.89
NCKIPSD-203ENST00000415281 PTPRMP28827 1452 aa20.57■□□□□ 0.88
NCKIPSD-203ENST00000415281 CFAP74Q9C0B2 1584 aa20.57■□□□□ 0.88
NCKIPSD-203ENST00000415281 ZMYM4Q5VZL5 1548 aa20.56■□□□□ 0.88
NCKIPSD-203ENST00000415281 ARHGEF40Q8TER5 1519 aa20.56■□□□□ 0.88
NCKIPSD-203ENST00000415281 YEATS2Q9ULM3 1422 aa20.55■□□□□ 0.88
NCKIPSD-203ENST00000415281 MADDQ8WXG6 1647 aa20.55■□□□□ 0.88
NCKIPSD-203ENST00000415281 ATP1B4Q9UN42 357 aaPredicted RBP20.54■□□□□ 0.88
NCKIPSD-203ENST00000415281 MYO5CQ9NQX4 1742 aa20.52■□□□□ 0.88
NCKIPSD-203ENST00000415281 SCAPERQ9BY12 1400 aa20.52■□□□□ 0.87
NCKIPSD-203ENST00000415281 TROQ12816 1431 aaPredicted RBP20.5■□□□□ 0.87
NCKIPSD-203ENST00000415281 ILDR1Q86SU0 546 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms