RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
SF1-207ENST00000413951 CUL7Q14999 1698 aa28.92■■■□□ 2.22
SF1-207ENST00000413951 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.22
SF1-207ENST00000413951 NPM1P06748 294 aaKnown RBP eCLIP28.89■■■□□ 2.22
SF1-207ENST00000413951 CARMIL1Q5VZK9 1371 aa28.8■■■□□ 2.2
SF1-207ENST00000413951 AEBP2Q6ZN18 517 aaPredicted RBP28.71■■■□□ 2.19
SF1-207ENST00000413951 CARMIL2Q6F5E8 1435 aa28.69■■■□□ 2.18
SF1-207ENST00000413951 MAPKBP1O60336 1514 aa28.69■■■□□ 2.18
SF1-207ENST00000413951 FAM69CQ0P6D2 419 aa28.67■■■□□ 2.18
SF1-207ENST00000413951 ABCC10Q5T3U5 1492 aa28.66■■■□□ 2.18
SF1-207ENST00000413951 PTPRGP23470 1445 aa28.65■■■□□ 2.18
SF1-207ENST00000413951 KIF13AQ9H1H9 1805 aa28.63■■■□□ 2.17
SF1-207ENST00000413951 ADCY10Q96PN6 1610 aa28.62■■■□□ 2.17
SF1-207ENST00000413951 TNIKQ9UKE5 1360 aa28.61■■■□□ 2.17
SF1-207ENST00000413951 IQGAP2Q13576 1575 aa28.58■■■□□ 2.17
SF1-207ENST00000413951 RAPGEF2Q9Y4G8 1499 aa28.55■■■□□ 2.16
SF1-207ENST00000413951 DIP2BQ9P265 1576 aa28.52■■■□□ 2.16
SF1-207ENST00000413951 TTBK1Q5TCY1 1321 aaPredicted RBP28.49■■■□□ 2.15
SF1-207ENST00000413951 ABCC2Q92887 1545 aa28.46■■■□□ 2.15
SF1-207ENST00000413951 UHRF1BP1LA0JNW5 1464 aa28.43■■■□□ 2.14
SF1-207ENST00000413951 UACAQ9BZF9 1416 aa28.42■■■□□ 2.14
SF1-207ENST00000413951 UGGT2Q9NYU1 1516 aa28.41■■■□□ 2.14
SF1-207ENST00000413951 PLB1Q6P1J6 1458 aa28.4■■■□□ 2.14
SF1-207ENST00000413951 DISP1Q96F81 1524 aa28.4■■■□□ 2.14
SF1-207ENST00000413951 ASXL2Q76L83 1435 aa28.35■■■□□ 2.13
SF1-207ENST00000413951 KDM6BO15054 1643 aa28.32■■■□□ 2.12
SF1-207ENST00000413951 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
SF1-207ENST00000413951 GLI2P10070 1586 aa28.28■■■□□ 2.12
SF1-207ENST00000413951 GOLGA3Q08378 1498 aa28.28■■■□□ 2.12
SF1-207ENST00000413951 KDM5BQ9UGL1 1544 aa28.28■■■□□ 2.12
SF1-207ENST00000413951 FAM9AQ8IZU1 332 aaPredicted RBP28.25■■■□□ 2.11
SF1-207ENST00000413951 TSPOAP1O95153 1857 aa28.24■■■□□ 2.11
SF1-207ENST00000413951 PRXQ9BXM0 1461 aa28.21■■■□□ 2.11
SF1-207ENST00000413951 CTTNBP2Q8WZ74 1663 aa28.2■■■□□ 2.11
SF1-207ENST00000413951 EPRSP07814 1512 aaKnown RBP28.17■■■□□ 2.1
SF1-207ENST00000413951 TEX14Q8IWB6 1497 aa28.14■■■□□ 2.09
SF1-207ENST00000413951 ZCCHC11Q5TAX3 1644 aaKnown RBP28.14■■■□□ 2.09
SF1-207ENST00000413951 WDR7Q9Y4E6 1490 aa28.09■■■□□ 2.09
SF1-207ENST00000413951 CSRNP3Q8WYN3 585 aa28.07■■■□□ 2.08
SF1-207ENST00000413951 MAP3K4Q9Y6R4 1608 aa28.06■■■□□ 2.08
SF1-207ENST00000413951 PPRC1Q5VV67 1664 aaKnown RBP28.05■■■□□ 2.08
SF1-207ENST00000413951 ABCA8O94911 1581 aa28.03■■■□□ 2.08
SF1-207ENST00000413951 EEA1Q15075 1411 aa28.01■■■□□ 2.08
SF1-207ENST00000413951 KDM4FA0A1W2PPD8 638 aa28■■■□□ 2.07
SF1-207ENST00000413951 KCNH8Q96L42 1107 aa27.95■■■□□ 2.06
SF1-207ENST00000413951 CD109Q6YHK3 1445 aa27.94■■■□□ 2.06
SF1-207ENST00000413951 MAGI3Q5TCQ9 1506 aa27.92■■■□□ 2.06
SF1-207ENST00000413951 COL17A1Q9UMD9 1497 aaPredicted RBP27.9■■■□□ 2.06
SF1-207ENST00000413951 CFAP43Q8NDM7 1665 aa27.9■■■□□ 2.06
SF1-207ENST00000413951 P3H3Q8IVL6 736 aa27.89■■■□□ 2.06
SF1-207ENST00000413951 SAMD9Q5K651 1589 aa27.83■■■□□ 2.05
SF1-207ENST00000413951 ATP10BO94823 1461 aa27.82■■■□□ 2.04
SF1-207ENST00000413951 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
SF1-207ENST00000413951 ADGRL1O94910 1474 aa27.79■■■□□ 2.04
SF1-207ENST00000413951 PHLDB1Q86UU1 1377 aa27.78■■■□□ 2.04
SF1-207ENST00000413951 ARID3CA6NKF2 412 aa27.77■■■□□ 2.04
SF1-207ENST00000413951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.76■■■□□ 2.03
SF1-207ENST00000413951 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
SF1-207ENST00000413951 RAPGEF6Q8TEU7 1601 aa27.74■■■□□ 2.03
SF1-207ENST00000413951 ARAP3Q8WWN8 1544 aa27.69■■■□□ 2.02
SF1-207ENST00000413951 RANGAP1P46060 587 aaPredicted RBP27.69■■■□□ 2.02
SF1-207ENST00000413951 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
SF1-207ENST00000413951 KIF21BO75037 1637 aa27.66■■■□□ 2.02
SF1-207ENST00000413951 EFCAB5A4FU69 1503 aa27.66■■■□□ 2.02
SF1-207ENST00000413951 FHOD3Q2V2M9 1422 aa27.65■■■□□ 2.02
SF1-207ENST00000413951 PLEKHD1A6NEE1 506 aa27.64■■■□□ 2.02
SF1-207ENST00000413951 NUP153P49790 1475 aaKnown RBP27.63■■■□□ 2.01
SF1-207ENST00000413951 NEO1Q92859 1461 aa27.62■■■□□ 2.01
SF1-207ENST00000413951 UBTFP17480 764 aaKnown RBP27.54■■■□□ 2
SF1-207ENST00000413951 RAPGEF3O95398 923 aa27.48■■□□□ 1.99
SF1-207ENST00000413951 FMN1Q68DA7 1419 aa27.46■■□□□ 1.99
SF1-207ENST00000413951 CDK11AQ9UQ88 783 aaPredicted RBP27.42■■□□□ 1.98
SF1-207ENST00000413951 CFAP74Q9C0B2 1584 aa27.42■■□□□ 1.98
SF1-207ENST00000413951 DENND4BO75064 1496 aaPredicted RBP27.4■■□□□ 1.98
SF1-207ENST00000413951 AKNAQ7Z591 1439 aa27.4■■□□□ 1.98
SF1-207ENST00000413951 FANCAO15360 1455 aa27.39■■□□□ 1.98
SF1-207ENST00000413951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.38■■□□□ 1.971e-8■■■■□ 19.9
SF1-207ENST00000413951 HECW2Q9P2P5 1572 aa27.38■■□□□ 1.97
SF1-207ENST00000413951 ATP1B4Q9UN42 357 aaPredicted RBP27.36■■□□□ 1.97
SF1-207ENST00000413951 ARID4BQ4LE39 1312 aaPredicted RBP27.36■■□□□ 1.97
SF1-207ENST00000413951 EHMT2Q96KQ7 1210 aa27.35■■□□□ 1.97
SF1-207ENST00000413951 HECW1Q76N89 1606 aa27.33■■□□□ 1.97
SF1-207ENST00000413951 FRMPD1Q5SYB0 1578 aa27.32■■□□□ 1.96
SF1-207ENST00000413951 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
SF1-207ENST00000413951 CDK13Q14004 1512 aaKnown RBP27.31■■□□□ 1.96
SF1-207ENST00000413951 PLCH2O75038 1416 aa27.29■■□□□ 1.96
SF1-207ENST00000413951 TTC37Q6PGP7 1564 aa27.28■■□□□ 1.96
SF1-207ENST00000413951 ADAMTSL3P82987 1691 aa27.27■■□□□ 1.96
SF1-207ENST00000413951 PTPRMP28827 1452 aa27.27■■□□□ 1.96
SF1-207ENST00000413951 MAGI2Q86UL8 1455 aa27.27■■□□□ 1.96
SF1-207ENST00000413951 ARHGEF40Q8TER5 1519 aa27.26■■□□□ 1.96
SF1-207ENST00000413951 POGZQ7Z3K3 1410 aa27.26■■□□□ 1.95
SF1-207ENST00000413951 RICTORQ6R327 1708 aa27.25■■□□□ 1.95
SF1-207ENST00000413951 EFCAB2Q5VUJ9 269 aa27.25■■□□□ 1.95
SF1-207ENST00000413951 ZMYM4Q5VZL5 1548 aa27.23■■□□□ 1.95
SF1-207ENST00000413951 CLIP1P30622 1438 aa27.23■■□□□ 1.95
SF1-207ENST00000413951 BCORL1Q5H9F3 1711 aa27.22■■□□□ 1.95
SF1-207ENST00000413951 SCAPERQ9BY12 1400 aa27.2■■□□□ 1.94
SF1-207ENST00000413951 TROQ12816 1431 aaPredicted RBP27.19■■□□□ 1.94
SF1-207ENST00000413951 ZFYVE16Q7Z3T8 1539 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms