RNA–Protein interactions for RNA: ENST00000412074.6

CHRNB4-202, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNB4, Length 1,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-202ENST00000412074 KIAA0586Q9BVV6 1533 aa29.92■■■□□ 2.38
CHRNB4-202ENST00000412074 UBTFP17480 764 aaKnown RBP29.87■■■□□ 2.37
CHRNB4-202ENST00000412074 KIF21BO75037 1637 aa29.87■■■□□ 2.37
CHRNB4-202ENST00000412074 ARHGEF11O15085 1522 aa29.8■■■□□ 2.36
CHRNB4-202ENST00000412074 GOLGA3Q08378 1498 aa29.79■■■□□ 2.36
CHRNB4-202ENST00000412074 PRG4Q92954 1404 aaPredicted RBP29.79■■■□□ 2.36
CHRNB4-202ENST00000412074 IQGAP2Q13576 1575 aa29.78■■■□□ 2.36
CHRNB4-202ENST00000412074 RANGAP1P46060 587 aaPredicted RBP29.77■■■□□ 2.36
CHRNB4-202ENST00000412074 RIMBP3CA6NJZ7 1639 aa29.75■■■□□ 2.35
CHRNB4-202ENST00000412074 RIMBP3BA6NNM3 1639 aa29.75■■■□□ 2.35
CHRNB4-202ENST00000412074 RIMBP3Q9UFD9 1639 aa29.75■■■□□ 2.35
CHRNB4-202ENST00000412074 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
CHRNB4-202ENST00000412074 ERCC6L2Q5T890 1561 aa29.73■■■□□ 2.35
CHRNB4-202ENST00000412074 CTTNBP2Q8WZ74 1663 aa29.72■■■□□ 2.35
CHRNB4-202ENST00000412074 LOC105371045A0A1W2PR82 267 aa29.7■■■□□ 2.35
CHRNB4-202ENST00000412074 CYB5RLQ6IPT4 315 aa29.69■■■□□ 2.34
CHRNB4-202ENST00000412074 TTBK1Q5TCY1 1321 aaPredicted RBP29.67■■■□□ 2.34
CHRNB4-202ENST00000412074 UGGT2Q9NYU1 1516 aa29.62■■■□□ 2.33
CHRNB4-202ENST00000412074 CARMIL2Q6F5E8 1435 aa29.62■■■□□ 2.33
CHRNB4-202ENST00000412074 P3H3Q8IVL6 736 aa29.62■■■□□ 2.33
CHRNB4-202ENST00000412074 ARAP1Q96P48 1450 aa29.6■■■□□ 2.33
CHRNB4-202ENST00000412074 DISP1Q96F81 1524 aa29.58■■■□□ 2.33
CHRNB4-202ENST00000412074 TNIKQ9UKE5 1360 aa29.52■■■□□ 2.32
CHRNB4-202ENST00000412074 PTPRGP23470 1445 aa29.49■■■□□ 2.31
CHRNB4-202ENST00000412074 KIAA0556O60303 1618 aa29.47■■■□□ 2.31
CHRNB4-202ENST00000412074 SAMD9Q5K651 1589 aa29.38■■■□□ 2.29
CHRNB4-202ENST00000412074 FHOD3Q2V2M9 1422 aa29.37■■■□□ 2.29
CHRNB4-202ENST00000412074 ARHGAP35Q9NRY4 1499 aa29.34■■■□□ 2.29
CHRNB4-202ENST00000412074 EFCAB5A4FU69 1503 aa29.33■■■□□ 2.29
CHRNB4-202ENST00000412074 CLIP1P30622 1438 aa29.32■■■□□ 2.28
CHRNB4-202ENST00000412074 CEP162Q5TB80 1403 aa29.27■■■□□ 2.28
CHRNB4-202ENST00000412074 UACAQ9BZF9 1416 aa29.27■■■□□ 2.28
CHRNB4-202ENST00000412074 PLB1Q6P1J6 1458 aa29.25■■■□□ 2.27
CHRNB4-202ENST00000412074 NPM1P06748 294 aaKnown RBP eCLIP29.24■■■□□ 2.27
CHRNB4-202ENST00000412074 ARID3CA6NKF2 412 aa29.19■■■□□ 2.26
CHRNB4-202ENST00000412074 ADCY10Q96PN6 1610 aa29.19■■■□□ 2.26
CHRNB4-202ENST00000412074 ATP1B4Q9UN42 357 aaPredicted RBP29.18■■■□□ 2.26
CHRNB4-202ENST00000412074 UHRF1BP1LA0JNW5 1464 aa29.14■■■□□ 2.26
CHRNB4-202ENST00000412074 ABCC2Q92887 1545 aa29.14■■■□□ 2.26
CHRNB4-202ENST00000412074 ABCA8O94911 1581 aa29.14■■■□□ 2.26
CHRNB4-202ENST00000412074 FMN1Q68DA7 1419 aa29.12■■■□□ 2.25
CHRNB4-202ENST00000412074 RAPGEF6Q8TEU7 1601 aa29.07■■■□□ 2.24
CHRNB4-202ENST00000412074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.06■■■□□ 2.24
CHRNB4-202ENST00000412074 HNRNPUL2Q1KMD3 747 aaKnown RBP29.06■■■□□ 2.24
CHRNB4-202ENST00000412074 KDM5BQ9UGL1 1544 aa29.02■■■□□ 2.24
CHRNB4-202ENST00000412074 ATP10BO94823 1461 aa28.99■■■□□ 2.23
CHRNB4-202ENST00000412074 NUP153P49790 1475 aaKnown RBP28.99■■■□□ 2.23
CHRNB4-202ENST00000412074 TRHP20396 242 aaPredicted RBP28.99■■■□□ 2.23
CHRNB4-202ENST00000412074 ZCCHC11Q5TAX3 1644 aaKnown RBP28.96■■■□□ 2.23
CHRNB4-202ENST00000412074 CASKIN1Q8WXD9 1431 aa28.94■■■□□ 2.22
CHRNB4-202ENST00000412074 ASXL2Q76L83 1435 aa28.92■■■□□ 2.22
CHRNB4-202ENST00000412074 PCF11O94913 1555 aaKnown RBP28.91■■■□□ 2.22
CHRNB4-202ENST00000412074 MAPKBP1O60336 1514 aa28.89■■■□□ 2.21
CHRNB4-202ENST00000412074 KCNH8Q96L42 1107 aa28.88■■■□□ 2.21
CHRNB4-202ENST00000412074 HECW1Q76N89 1606 aa28.88■■■□□ 2.21
CHRNB4-202ENST00000412074 CDK13Q14004 1512 aaKnown RBP28.88■■■□□ 2.21
CHRNB4-202ENST00000412074 VPS8Q8N3P4 1428 aa28.86■■■□□ 2.21
CHRNB4-202ENST00000412074 EPRSP07814 1512 aaKnown RBP28.86■■■□□ 2.21
CHRNB4-202ENST00000412074 PLEKHD1A6NEE1 506 aa28.86■■■□□ 2.21
CHRNB4-202ENST00000412074 FYCO1Q9BQS8 1478 aa28.86■■■□□ 2.21
CHRNB4-202ENST00000412074 FAM69CQ0P6D2 419 aa28.85■■■□□ 2.21
CHRNB4-202ENST00000412074 CDK11AQ9UQ88 783 aaPredicted RBP28.79■■■□□ 2.2
CHRNB4-202ENST00000412074 WDR7Q9Y4E6 1490 aa28.79■■■□□ 2.2
CHRNB4-202ENST00000412074 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
CHRNB4-202ENST00000412074 LRRIQ1Q96JM4 1722 aa28.75■■■□□ 2.19
CHRNB4-202ENST00000412074 CCDC18Q5T9S5 1454 aa28.74■■■□□ 2.19
CHRNB4-202ENST00000412074 DIP2BQ9P265 1576 aa28.69■■■□□ 2.18
CHRNB4-202ENST00000412074 APLP2Q06481 763 aa28.68■■■□□ 2.18
CHRNB4-202ENST00000412074 KIF13AQ9H1H9 1805 aa28.63■■■□□ 2.17
CHRNB4-202ENST00000412074 TROQ12816 1431 aaPredicted RBP28.63■■■□□ 2.17
CHRNB4-202ENST00000412074 MTUS2Q5JR59 1369 aa28.61■■■□□ 2.17
CHRNB4-202ENST00000412074 GLI2P10070 1586 aa28.6■■■□□ 2.17
CHRNB4-202ENST00000412074 MAGI3Q5TCQ9 1506 aa28.6■■■□□ 2.17
CHRNB4-202ENST00000412074 KANK4Q5T7N3 995 aaPredicted RBP28.57■■■□□ 2.16
CHRNB4-202ENST00000412074 CD109Q6YHK3 1445 aa28.56■■■□□ 2.16
CHRNB4-202ENST00000412074 TIAM1Q13009 1591 aa28.55■■■□□ 2.16
CHRNB4-202ENST00000412074 TSPOAP1O95153 1857 aa28.51■■■□□ 2.16
CHRNB4-202ENST00000412074 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.51■■■□□ 2.15
CHRNB4-202ENST00000412074 KIF14Q15058 1648 aa28.51■■■□□ 2.15
CHRNB4-202ENST00000412074 CFAP43Q8NDM7 1665 aa28.49■■■□□ 2.15
CHRNB4-202ENST00000412074 MAP3K1Q13233 1512 aa28.48■■■□□ 2.15
CHRNB4-202ENST00000412074 ABCA9Q8IUA7 1624 aa28.48■■■□□ 2.15
CHRNB4-202ENST00000412074 MAP3K4Q9Y6R4 1608 aa28.48■■■□□ 2.15
CHRNB4-202ENST00000412074 LRRC9Q6ZRR7 1453 aa28.47■■■□□ 2.15
CHRNB4-202ENST00000412074 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.14
CHRNB4-202ENST00000412074 TTC37Q6PGP7 1564 aa28.44■■■□□ 2.14
CHRNB4-202ENST00000412074 EHBP1L1Q8N3D4 1523 aa28.44■■■□□ 2.14
CHRNB4-202ENST00000412074 PPRC1Q5VV67 1664 aaKnown RBP28.37■■■□□ 2.13
CHRNB4-202ENST00000412074 TEX14Q8IWB6 1497 aa28.37■■■□□ 2.13
CHRNB4-202ENST00000412074 PLCH2O75038 1416 aa28.37■■■□□ 2.13
CHRNB4-202ENST00000412074 CCNB3Q8WWL7 1395 aa28.36■■■□□ 2.13
CHRNB4-202ENST00000412074 NCOA2Q15596 1464 aa28.34■■■□□ 2.13
CHRNB4-202ENST00000412074 EFCAB2Q5VUJ9 269 aa28.34■■■□□ 2.13
CHRNB4-202ENST00000412074 SUPT6HQ7KZ85 1726 aaKnown RBP28.31■■■□□ 2.12
CHRNB4-202ENST00000412074 ZNF777Q9ULD5 760 aaPredicted RBP28.31■■■□□ 2.12
CHRNB4-202ENST00000412074 GPATCH8Q9UKJ3 1502 aaKnown RBP28.3■■■□□ 2.12
CHRNB4-202ENST00000412074 CFDP1Q9UEE9 299 aaPredicted RBP28.3■■■□□ 2.12
CHRNB4-202ENST00000412074 FANCAO15360 1455 aa28.29■■■□□ 2.12
CHRNB4-202ENST00000412074 MYO5CQ9NQX4 1742 aa28.29■■■□□ 2.12
CHRNB4-202ENST00000412074 ARHGAP5Q13017 1502 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms