RNA–Protein interactions for RNA: ENST00000412074.6

CHRNB4-202, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNB4, Length 1,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-202ENST00000412074 NISCHQ9Y2I1 1504 aa43.34■■■■■ 4.53
CHRNB4-202ENST00000412074 CCDC180Q9P1Z9 1646 aa38.2■■■■□ 3.71
CHRNB4-202ENST00000412074 ABCC9O60706 1549 aa37.27■■■■□ 3.56
CHRNB4-202ENST00000412074 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
CHRNB4-202ENST00000412074 ZCCHC6Q5VYS8 1495 aaKnown RBP36.14■■■■□ 3.38
CHRNB4-202ENST00000412074 NACADO15069 1562 aa35.91■■■■□ 3.34
CHRNB4-202ENST00000412074 RB1CC1Q8TDY2 1594 aa35.87■■■■□ 3.33
CHRNB4-202ENST00000412074 DCAF1Q9Y4B6 1507 aa35.76■■■■□ 3.32
CHRNB4-202ENST00000412074 MYO15BQ96JP2 1530 aa35.74■■■■□ 3.31
CHRNB4-202ENST00000412074 SCRIBQ14160 1630 aa35.07■■■■□ 3.2
CHRNB4-202ENST00000412074 PABPN1Q86U42 306 aaKnown RBP eCLIP35.01■■■■□ 3.2
CHRNB4-202ENST00000412074 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.19
CHRNB4-202ENST00000412074 BICRAQ9NZM4 1560 aa34.78■■■■□ 3.16
CHRNB4-202ENST00000412074 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
CHRNB4-202ENST00000412074 DNAJC5BQ9UF47 199 aa33.93■■■■□ 3.02
CHRNB4-202ENST00000412074 EIF4G1Q04637 1599 aaKnown RBP33.84■■■■□ 3.01
CHRNB4-202ENST00000412074 CECR2Q9BXF3 1484 aa33.8■■■■□ 3
CHRNB4-202ENST00000412074 CC2D2AQ9P2K1 1620 aa33.63■■■□□ 2.97
CHRNB4-202ENST00000412074 BAZ1AQ9NRL2 1556 aaPredicted RBP33.52■■■□□ 2.96
CHRNB4-202ENST00000412074 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
CHRNB4-202ENST00000412074 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
CHRNB4-202ENST00000412074 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
CHRNB4-202ENST00000412074 RSF1Q96T23 1441 aaPredicted RBP33.22■■■□□ 2.91
CHRNB4-202ENST00000412074 SMARCA2P51531 1590 aa33.2■■■□□ 2.91
CHRNB4-202ENST00000412074 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
CHRNB4-202ENST00000412074 WIZO95785 1651 aa33.1■■■□□ 2.89
CHRNB4-202ENST00000412074 PEG3Q9GZU2 1588 aa33.1■■■□□ 2.89
CHRNB4-202ENST00000412074 BAZ1BQ9UIG0 1483 aaKnown RBP33.03■■■□□ 2.88
CHRNB4-202ENST00000412074 HMGXB3Q12766 1538 aa32.97■■■□□ 2.87
CHRNB4-202ENST00000412074 SUPT5HO00267 1087 aaKnown RBP32.9■■■□□ 2.86
CHRNB4-202ENST00000412074 TOP2AP11388 1531 aaKnown RBP32.72■■■□□ 2.83
CHRNB4-202ENST00000412074 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
CHRNB4-202ENST00000412074 NESP48681 1621 aa32.35■■■□□ 2.77
CHRNB4-202ENST00000412074 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
CHRNB4-202ENST00000412074 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
CHRNB4-202ENST00000412074 CFTRP13569 1480 aa32.13■■■□□ 2.73
CHRNB4-202ENST00000412074 ERCC6Q03468 1493 aa32.07■■■□□ 2.72
CHRNB4-202ENST00000412074 PDS5BQ9NTI5 1447 aa32.05■■■□□ 2.72
CHRNB4-202ENST00000412074 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
CHRNB4-202ENST00000412074 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
CHRNB4-202ENST00000412074 CEP164Q9UPV0 1460 aa31.81■■■□□ 2.68
CHRNB4-202ENST00000412074 PRDM2Q13029 1718 aa31.76■■■□□ 2.67
CHRNB4-202ENST00000412074 MRC2Q9UBG0 1479 aa31.67■■■□□ 2.66
CHRNB4-202ENST00000412074 THOC2Q8NI27 1593 aaKnown RBP31.62■■■□□ 2.65
CHRNB4-202ENST00000412074 URB2Q14146 1524 aaKnown RBP31.55■■■□□ 2.64
CHRNB4-202ENST00000412074 WDR62O43379 1518 aa31.49■■■□□ 2.63
CHRNB4-202ENST00000412074 CUX2O14529 1486 aa31.47■■■□□ 2.63
CHRNB4-202ENST00000412074 TOPBP1Q92547 1522 aa31.42■■■□□ 2.62
CHRNB4-202ENST00000412074 ABCC8Q09428 1581 aa31.4■■■□□ 2.62
CHRNB4-202ENST00000412074 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
CHRNB4-202ENST00000412074 CUX1P39880 1505 aa31.34■■■□□ 2.61
CHRNB4-202ENST00000412074 WRNQ14191 1432 aaPredicted RBP eCLIP31.3■■■□□ 2.6
CHRNB4-202ENST00000412074 POLA1P09884 1462 aaPredicted RBP31.18■■■□□ 2.58
CHRNB4-202ENST00000412074 FGD5Q6ZNL6 1462 aa31.18■■■□□ 2.58
CHRNB4-202ENST00000412074 SYNJ1O43426 1573 aa31.17■■■□□ 2.58
CHRNB4-202ENST00000412074 SOGA1O94964 1423 aa31.14■■■□□ 2.58
CHRNB4-202ENST00000412074 RAD54L2Q9Y4B4 1467 aa31.12■■■□□ 2.57
CHRNB4-202ENST00000412074 IFT140Q96RY7 1462 aa31.12■■■□□ 2.57
CHRNB4-202ENST00000412074 TOP2BQ02880 1626 aa31.11■■■□□ 2.57
CHRNB4-202ENST00000412074 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
CHRNB4-202ENST00000412074 ZNF608Q9ULD9 1512 aaPredicted RBP31■■■□□ 2.55
CHRNB4-202ENST00000412074 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
CHRNB4-202ENST00000412074 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
CHRNB4-202ENST00000412074 TDRD9Q8NDG6 1382 aaKnown RBP30.95■■■□□ 2.55
CHRNB4-202ENST00000412074 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.54
CHRNB4-202ENST00000412074 CHIC1Q5VXU3 224 aa30.86■■■□□ 2.53
CHRNB4-202ENST00000412074 ABCA10Q8WWZ4 1543 aa30.85■■■□□ 2.53
CHRNB4-202ENST00000412074 EIF4G3O43432 1585 aaKnown RBP30.8■■■□□ 2.52
CHRNB4-202ENST00000412074 WDR97A6NE52 1622 aa30.77■■■□□ 2.52
CHRNB4-202ENST00000412074 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
CHRNB4-202ENST00000412074 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
CHRNB4-202ENST00000412074 ABCA5Q8WWZ7 1642 aa30.64■■■□□ 2.5
CHRNB4-202ENST00000412074 KIF27Q86VH2 1401 aa30.63■■■□□ 2.49
CHRNB4-202ENST00000412074 FBLN2P98095 1184 aa30.6■■■□□ 2.49
CHRNB4-202ENST00000412074 SNAPC4Q5SXM2 1469 aa30.59■■■□□ 2.49
CHRNB4-202ENST00000412074 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
CHRNB4-202ENST00000412074 RUSC2Q8N2Y8 1516 aa30.55■■■□□ 2.48
CHRNB4-202ENST00000412074 IGF1RP08069 1367 aa30.5■■■□□ 2.47
CHRNB4-202ENST00000412074 CHMP7Q8WUX9 453 aaPredicted RBP30.5■■■□□ 2.47
CHRNB4-202ENST00000412074 MAGI1Q96QZ7 1491 aaPredicted RBP30.48■■■□□ 2.47
CHRNB4-202ENST00000412074 ERICH3Q5RHP9 1530 aa30.47■■■□□ 2.47
CHRNB4-202ENST00000412074 FAM9AQ8IZU1 332 aaPredicted RBP30.44■■■□□ 2.46
CHRNB4-202ENST00000412074 OSCARQ8IYS5 282 aa30.41■■■□□ 2.46
CHRNB4-202ENST00000412074 SYNJ2O15056 1496 aa30.39■■■□□ 2.45
CHRNB4-202ENST00000412074 FHAD1B1AJZ9 1412 aa30.38■■■□□ 2.45
CHRNB4-202ENST00000412074 ADAMTS12P58397 1594 aa30.34■■■□□ 2.45
CHRNB4-202ENST00000412074 CARMIL1Q5VZK9 1371 aa30.34■■■□□ 2.45
CHRNB4-202ENST00000412074 CHD1O14646 1710 aa30.33■■■□□ 2.45
CHRNB4-202ENST00000412074 CSRNP3Q8WYN3 585 aa30.3■■■□□ 2.44
CHRNB4-202ENST00000412074 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
CHRNB4-202ENST00000412074 EEA1Q15075 1411 aa30.24■■■□□ 2.43
CHRNB4-202ENST00000412074 CUL7Q14999 1698 aa30.23■■■□□ 2.43
CHRNB4-202ENST00000412074 DNAJC5Q9H3Z4 198 aa30.19■■■□□ 2.42
CHRNB4-202ENST00000412074 RAPGEF2Q9Y4G8 1499 aa30.15■■■□□ 2.42
CHRNB4-202ENST00000412074 EHMT2Q96KQ7 1210 aa30.1■■■□□ 2.41
CHRNB4-202ENST00000412074 PRXQ9BXM0 1461 aa30.1■■■□□ 2.41
CHRNB4-202ENST00000412074 NUP160Q12769 1436 aa30.08■■■□□ 2.41
CHRNB4-202ENST00000412074 CEP170Q5SW79 1584 aa30.08■■■□□ 2.41
CHRNB4-202ENST00000412074 CLASP1Q7Z460 1538 aa30■■■□□ 2.39
CHRNB4-202ENST00000412074 JPH4Q96JJ6 628 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms