RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 KIF27Q86VH2 1401 aa28.95■■■□□ 2.23
SCAMP4-203ENST00000411971 CUL7Q14999 1698 aa28.94■■■□□ 2.22
SCAMP4-203ENST00000411971 KIF13AQ9H1H9 1805 aa28.88■■■□□ 2.21
SCAMP4-203ENST00000411971 KIAA0586Q9BVV6 1533 aa28.86■■■□□ 2.21
SCAMP4-203ENST00000411971 ADCY10Q96PN6 1610 aa28.8■■■□□ 2.2
SCAMP4-203ENST00000411971 CARMIL1Q5VZK9 1371 aa28.79■■■□□ 2.2
SCAMP4-203ENST00000411971 MAPKBP1O60336 1514 aa28.65■■■□□ 2.18
SCAMP4-203ENST00000411971 ABCC10Q5T3U5 1492 aa28.63■■■□□ 2.17
SCAMP4-203ENST00000411971 IQGAP2Q13576 1575 aa28.62■■■□□ 2.17
SCAMP4-203ENST00000411971 DIP2BQ9P265 1576 aa28.62■■■□□ 2.17
SCAMP4-203ENST00000411971 FAM69CQ0P6D2 419 aa28.57■■■□□ 2.16
SCAMP4-203ENST00000411971 TTBK1Q5TCY1 1321 aaPredicted RBP28.57■■■□□ 2.16
SCAMP4-203ENST00000411971 PTPRGP23470 1445 aa28.57■■■□□ 2.16
SCAMP4-203ENST00000411971 DISP1Q96F81 1524 aa28.55■■■□□ 2.16
SCAMP4-203ENST00000411971 NPM1P06748 294 aaKnown RBP eCLIP28.54■■■□□ 2.16
SCAMP4-203ENST00000411971 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
SCAMP4-203ENST00000411971 TNIKQ9UKE5 1360 aa28.51■■■□□ 2.16
SCAMP4-203ENST00000411971 CARMIL2Q6F5E8 1435 aa28.49■■■□□ 2.15
SCAMP4-203ENST00000411971 TSPOAP1O95153 1857 aa28.48■■■□□ 2.15
SCAMP4-203ENST00000411971 UGGT2Q9NYU1 1516 aa28.45■■■□□ 2.15
SCAMP4-203ENST00000411971 ABCC2Q92887 1545 aa28.43■■■□□ 2.14
SCAMP4-203ENST00000411971 KIAA0556O60303 1618 aa28.4■■■□□ 2.14
SCAMP4-203ENST00000411971 CTTNBP2Q8WZ74 1663 aa28.39■■■□□ 2.14
SCAMP4-203ENST00000411971 UHRF1BP1LA0JNW5 1464 aa28.38■■■□□ 2.13
SCAMP4-203ENST00000411971 UACAQ9BZF9 1416 aa28.36■■■□□ 2.13
SCAMP4-203ENST00000411971 ASXL2Q76L83 1435 aa28.35■■■□□ 2.13
SCAMP4-203ENST00000411971 AEBP2Q6ZN18 517 aaPredicted RBP28.34■■■□□ 2.13
SCAMP4-203ENST00000411971 PPRC1Q5VV67 1664 aaKnown RBP28.33■■■□□ 2.13
SCAMP4-203ENST00000411971 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
SCAMP4-203ENST00000411971 KDM6BO15054 1643 aa28.3■■■□□ 2.12
SCAMP4-203ENST00000411971 ZCCHC11Q5TAX3 1644 aaKnown RBP28.29■■■□□ 2.12
SCAMP4-203ENST00000411971 KDM5BQ9UGL1 1544 aa28.28■■■□□ 2.12
SCAMP4-203ENST00000411971 PLB1Q6P1J6 1458 aa28.26■■■□□ 2.11
SCAMP4-203ENST00000411971 GLI2P10070 1586 aa28.25■■■□□ 2.11
SCAMP4-203ENST00000411971 EPRSP07814 1512 aaKnown RBP28.19■■■□□ 2.1
SCAMP4-203ENST00000411971 MAP3K4Q9Y6R4 1608 aa28.17■■■□□ 2.1
SCAMP4-203ENST00000411971 ABCA8O94911 1581 aa28.16■■■□□ 2.1
SCAMP4-203ENST00000411971 GOLGA3Q08378 1498 aa28.11■■■□□ 2.09
SCAMP4-203ENST00000411971 COL17A1Q9UMD9 1497 aaPredicted RBP28.11■■■□□ 2.09
SCAMP4-203ENST00000411971 KDM4FA0A1W2PPD8 638 aa28.06■■■□□ 2.08
SCAMP4-203ENST00000411971 WDR7Q9Y4E6 1490 aa28.06■■■□□ 2.08
SCAMP4-203ENST00000411971 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
SCAMP4-203ENST00000411971 P3H3Q8IVL6 736 aa28.02■■■□□ 2.08
SCAMP4-203ENST00000411971 SAMD9Q5K651 1589 aa27.99■■■□□ 2.07
SCAMP4-203ENST00000411971 ARID3CA6NKF2 412 aa27.93■■■□□ 2.06
SCAMP4-203ENST00000411971 CFAP43Q8NDM7 1665 aa27.92■■■□□ 2.06
SCAMP4-203ENST00000411971 TEX14Q8IWB6 1497 aa27.91■■■□□ 2.06
SCAMP4-203ENST00000411971 KCNH8Q96L42 1107 aa27.91■■■□□ 2.06
SCAMP4-203ENST00000411971 ATP10BO94823 1461 aa27.9■■■□□ 2.06
SCAMP4-203ENST00000411971 FAM9AQ8IZU1 332 aaPredicted RBP27.89■■■□□ 2.06
SCAMP4-203ENST00000411971 CD109Q6YHK3 1445 aa27.86■■■□□ 2.05
SCAMP4-203ENST00000411971 MAGI3Q5TCQ9 1506 aa27.86■■■□□ 2.05
SCAMP4-203ENST00000411971 EEA1Q15075 1411 aa27.85■■■□□ 2.05
SCAMP4-203ENST00000411971 RAPGEF6Q8TEU7 1601 aa27.84■■■□□ 2.05
SCAMP4-203ENST00000411971 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
SCAMP4-203ENST00000411971 ADGRL1O94910 1474 aa27.81■■■□□ 2.04
SCAMP4-203ENST00000411971 FHOD3Q2V2M9 1422 aa27.79■■■□□ 2.04
SCAMP4-203ENST00000411971 KIF21BO75037 1637 aa27.78■■■□□ 2.04
SCAMP4-203ENST00000411971 NUP153P49790 1475 aaKnown RBP27.76■■■□□ 2.03
SCAMP4-203ENST00000411971 ABCA9Q8IUA7 1624 aa27.74■■■□□ 2.03
SCAMP4-203ENST00000411971 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
SCAMP4-203ENST00000411971 EHMT2Q96KQ7 1210 aa27.65■■■□□ 2.02
SCAMP4-203ENST00000411971 ARAP3Q8WWN8 1544 aa27.64■■■□□ 2.02
SCAMP4-203ENST00000411971 EFCAB5A4FU69 1503 aa27.61■■■□□ 2.01
SCAMP4-203ENST00000411971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.6■■■□□ 2.01
SCAMP4-203ENST00000411971 HNRNPUL2Q1KMD3 747 aaKnown RBP27.6■■■□□ 2.01
SCAMP4-203ENST00000411971 FRMPD1Q5SYB0 1578 aa27.56■■■□□ 2
SCAMP4-203ENST00000411971 CDK13Q14004 1512 aaKnown RBP27.53■■■□□ 2
SCAMP4-203ENST00000411971 RAPGEF3O95398 923 aa27.52■■■□□ 2
SCAMP4-203ENST00000411971 NEO1Q92859 1461 aa27.51■■□□□ 1.99
SCAMP4-203ENST00000411971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.5■■□□□ 1.99
SCAMP4-203ENST00000411971 TTC37Q6PGP7 1564 aa27.49■■□□□ 1.99
SCAMP4-203ENST00000411971 ARHGAP35Q9NRY4 1499 aa27.49■■□□□ 1.99
SCAMP4-203ENST00000411971 UBTFP17480 764 aaKnown RBP27.46■■□□□ 1.99
SCAMP4-203ENST00000411971 PLEKHD1A6NEE1 506 aa27.45■■□□□ 1.98
SCAMP4-203ENST00000411971 PHLDB1Q86UU1 1377 aa27.45■■□□□ 1.98
SCAMP4-203ENST00000411971 HECW2Q9P2P5 1572 aa27.43■■□□□ 1.98
SCAMP4-203ENST00000411971 RICTORQ6R327 1708 aa27.43■■□□□ 1.98
SCAMP4-203ENST00000411971 LRRIQ1Q96JM4 1722 aa27.41■■□□□ 1.98
SCAMP4-203ENST00000411971 ADAMTSL3P82987 1691 aa27.39■■□□□ 1.97
SCAMP4-203ENST00000411971 FANCAO15360 1455 aa27.37■■□□□ 1.97
SCAMP4-203ENST00000411971 AKNAQ7Z591 1439 aa27.36■■□□□ 1.97
SCAMP4-203ENST00000411971 HECW1Q76N89 1606 aa27.35■■□□□ 1.97
SCAMP4-203ENST00000411971 SIGLEC1Q9BZZ2 1709 aa27.33■■□□□ 1.97
SCAMP4-203ENST00000411971 BCORL1Q5H9F3 1711 aa27.32■■□□□ 1.96
SCAMP4-203ENST00000411971 FMN1Q68DA7 1419 aa27.32■■□□□ 1.96
SCAMP4-203ENST00000411971 DENND4BO75064 1496 aaPredicted RBP27.32■■□□□ 1.96
SCAMP4-203ENST00000411971 CFAP74Q9C0B2 1584 aa27.31■■□□□ 1.96
SCAMP4-203ENST00000411971 KIF14Q15058 1648 aa27.31■■□□□ 1.96
SCAMP4-203ENST00000411971 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
SCAMP4-203ENST00000411971 ATP1B4Q9UN42 357 aaPredicted RBP27.3■■□□□ 1.96
SCAMP4-203ENST00000411971 MADDQ8WXG6 1647 aa27.27■■□□□ 1.96
SCAMP4-203ENST00000411971 ZMYM4Q5VZL5 1548 aa27.25■■□□□ 1.95
SCAMP4-203ENST00000411971 PTPRMP28827 1452 aa27.25■■□□□ 1.95
SCAMP4-203ENST00000411971 PLCH2O75038 1416 aa27.24■■□□□ 1.95
SCAMP4-203ENST00000411971 YEATS2Q9ULM3 1422 aa27.24■■□□□ 1.95
SCAMP4-203ENST00000411971 MYO5CQ9NQX4 1742 aa27.24■■□□□ 1.95
SCAMP4-203ENST00000411971 PCF11O94913 1555 aaKnown RBP27.2■■□□□ 1.94
SCAMP4-203ENST00000411971 SCAPERQ9BY12 1400 aa27.18■■□□□ 1.94
SCAMP4-203ENST00000411971 ARID4BQ4LE39 1312 aaPredicted RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms