RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 CTTNBP2Q8WZ74 1663 aa24.81■■□□□ 1.56
LSM5-207ENST00000410044 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
LSM5-207ENST00000410044 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
LSM5-207ENST00000410044 IQGAP2Q13576 1575 aa24.76■■□□□ 1.55
LSM5-207ENST00000410044 JPH4Q96JJ6 628 aa24.76■■□□□ 1.55
LSM5-207ENST00000410044 TNIKQ9UKE5 1360 aa24.76■■□□□ 1.55
LSM5-207ENST00000410044 EHMT2Q96KQ7 1210 aa24.75■■□□□ 1.55
LSM5-207ENST00000410044 SHROOM2Q13796 1616 aa24.74■■□□□ 1.55
LSM5-207ENST00000410044 UGGT2Q9NYU1 1516 aa24.69■■□□□ 1.54
LSM5-207ENST00000410044 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
LSM5-207ENST00000410044 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
LSM5-207ENST00000410044 DISP1Q96F81 1524 aa24.58■■□□□ 1.53
LSM5-207ENST00000410044 CARMIL2Q6F5E8 1435 aa24.57■■□□□ 1.52
LSM5-207ENST00000410044 SAMD9Q5K651 1589 aa24.54■■□□□ 1.52
LSM5-207ENST00000410044 EFCAB5A4FU69 1503 aa24.53■■□□□ 1.52
LSM5-207ENST00000410044 ERCC6L2Q5T890 1561 aa24.53■■□□□ 1.52
LSM5-207ENST00000410044 ARHGEF11O15085 1522 aa24.52■■□□□ 1.52
LSM5-207ENST00000410044 KIAA0556O60303 1618 aa24.52■■□□□ 1.52
LSM5-207ENST00000410044 ARHGAP35Q9NRY4 1499 aa24.49■■□□□ 1.51
LSM5-207ENST00000410044 CLIP1P30622 1438 aa24.48■■□□□ 1.51
LSM5-207ENST00000410044 RANGAP1P46060 587 aaPredicted RBP24.48■■□□□ 1.51
LSM5-207ENST00000410044 CEP162Q5TB80 1403 aa24.48■■□□□ 1.51
LSM5-207ENST00000410044 RIMBP3CA6NJZ7 1639 aa24.47■■□□□ 1.51
LSM5-207ENST00000410044 RIMBP3BA6NNM3 1639 aa24.47■■□□□ 1.51
LSM5-207ENST00000410044 RIMBP3Q9UFD9 1639 aa24.47■■□□□ 1.51
LSM5-207ENST00000410044 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
LSM5-207ENST00000410044 PTPRGP23470 1445 aa24.4■■□□□ 1.5
LSM5-207ENST00000410044 FHOD3Q2V2M9 1422 aa24.37■■□□□ 1.49
LSM5-207ENST00000410044 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
LSM5-207ENST00000410044 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
LSM5-207ENST00000410044 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
LSM5-207ENST00000410044 UACAQ9BZF9 1416 aa24.26■■□□□ 1.47
LSM5-207ENST00000410044 ABCA8O94911 1581 aa24.25■■□□□ 1.47
LSM5-207ENST00000410044 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
LSM5-207ENST00000410044 UHRF1BP1LA0JNW5 1464 aa24.25■■□□□ 1.47
LSM5-207ENST00000410044 PLB1Q6P1J6 1458 aa24.23■■□□□ 1.47
LSM5-207ENST00000410044 RAPGEF6Q8TEU7 1601 aa24.2■■□□□ 1.46
LSM5-207ENST00000410044 ABCC2Q92887 1545 aa24.19■■□□□ 1.46
LSM5-207ENST00000410044 VPS8Q8N3P4 1428 aa24.18■■□□□ 1.46
LSM5-207ENST00000410044 CASKIN1Q8WXD9 1431 aa24.18■■□□□ 1.46
LSM5-207ENST00000410044 ADCY10Q96PN6 1610 aa24.16■■□□□ 1.46
LSM5-207ENST00000410044 NUP153P49790 1475 aaKnown RBP24.12■■□□□ 1.45
LSM5-207ENST00000410044 FYCO1Q9BQS8 1478 aa24.12■■□□□ 1.45
LSM5-207ENST00000410044 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
LSM5-207ENST00000410044 PCF11O94913 1555 aaKnown RBP24.1■■□□□ 1.45
LSM5-207ENST00000410044 HECW1Q76N89 1606 aa24.09■■□□□ 1.45
LSM5-207ENST00000410044 ATP10BO94823 1461 aa24.07■■□□□ 1.44
LSM5-207ENST00000410044 NPM1P06748 294 aaKnown RBP eCLIP24.05■■□□□ 1.44
LSM5-207ENST00000410044 EPRSP07814 1512 aaKnown RBP24.05■■□□□ 1.44
LSM5-207ENST00000410044 ATP1B4Q9UN42 357 aaPredicted RBP24.03■■□□□ 1.44
LSM5-207ENST00000410044 LRRIQ1Q96JM4 1722 aa24.02■■□□□ 1.44
LSM5-207ENST00000410044 ZCCHC11Q5TAX3 1644 aaKnown RBP24.01■■□□□ 1.43
LSM5-207ENST00000410044 CCDC18Q5T9S5 1454 aa24■■□□□ 1.43
LSM5-207ENST00000410044 MAP3K1Q13233 1512 aa23.98■■□□□ 1.43
LSM5-207ENST00000410044 MAPKBP1O60336 1514 aa23.94■■□□□ 1.42
LSM5-207ENST00000410044 CDK13Q14004 1512 aaKnown RBP23.94■■□□□ 1.42
LSM5-207ENST00000410044 ARID3CA6NKF2 412 aa23.94■■□□□ 1.42
LSM5-207ENST00000410044 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
LSM5-207ENST00000410044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
LSM5-207ENST00000410044 HNRNPUL2Q1KMD3 747 aaKnown RBP23.92■■□□□ 1.42
LSM5-207ENST00000410044 PLEKHD1A6NEE1 506 aa23.91■■□□□ 1.42
LSM5-207ENST00000410044 ASXL2Q76L83 1435 aa23.9■■□□□ 1.42
LSM5-207ENST00000410044 TIAM1Q13009 1591 aa23.89■■□□□ 1.41
LSM5-207ENST00000410044 APLP2Q06481 763 aa23.88■■□□□ 1.41
LSM5-207ENST00000410044 CFAP43Q8NDM7 1665 aa23.88■■□□□ 1.41
LSM5-207ENST00000410044 WDR7Q9Y4E6 1490 aa23.85■■□□□ 1.41
LSM5-207ENST00000410044 MAGI3Q5TCQ9 1506 aa23.83■■□□□ 1.41
LSM5-207ENST00000410044 TROQ12816 1431 aaPredicted RBP23.83■■□□□ 1.4
LSM5-207ENST00000410044 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
LSM5-207ENST00000410044 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
LSM5-207ENST00000410044 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
LSM5-207ENST00000410044 ABCC10Q5T3U5 1492 aa23.77■■□□□ 1.4
LSM5-207ENST00000410044 EHBP1L1Q8N3D4 1523 aa23.76■■□□□ 1.39
LSM5-207ENST00000410044 KCNH8Q96L42 1107 aa23.75■■□□□ 1.39
LSM5-207ENST00000410044 GLI2P10070 1586 aa23.74■■□□□ 1.39
LSM5-207ENST00000410044 DIP2BQ9P265 1576 aa23.71■■□□□ 1.39
LSM5-207ENST00000410044 KIF14Q15058 1648 aa23.69■■□□□ 1.38
LSM5-207ENST00000410044 ABCA9Q8IUA7 1624 aa23.69■■□□□ 1.38
LSM5-207ENST00000410044 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
LSM5-207ENST00000410044 FAM69CQ0P6D2 419 aa23.68■■□□□ 1.38
LSM5-207ENST00000410044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.68■■□□□ 1.38
LSM5-207ENST00000410044 SUPT6HQ7KZ85 1726 aaKnown RBP23.67■■□□□ 1.38
LSM5-207ENST00000410044 NCOA2Q15596 1464 aa23.63■■□□□ 1.37
LSM5-207ENST00000410044 MAP3K4Q9Y6R4 1608 aa23.62■■□□□ 1.37
LSM5-207ENST00000410044 TTC37Q6PGP7 1564 aa23.61■■□□□ 1.37
LSM5-207ENST00000410044 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
LSM5-207ENST00000410044 PLCH2O75038 1416 aa23.59■■□□□ 1.37
LSM5-207ENST00000410044 TRHP20396 242 aaPredicted RBP23.58■■□□□ 1.37
LSM5-207ENST00000410044 GPATCH8Q9UKJ3 1502 aaKnown RBP23.58■■□□□ 1.36
LSM5-207ENST00000410044 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
LSM5-207ENST00000410044 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
LSM5-207ENST00000410044 ARAP3Q8WWN8 1544 aa23.56■■□□□ 1.36
LSM5-207ENST00000410044 CDC42BPAQ5VT25 1732 aa23.56■■□□□ 1.36
LSM5-207ENST00000410044 MYO5CQ9NQX4 1742 aa23.55■■□□□ 1.36
LSM5-207ENST00000410044 CDC42BPBQ9Y5S2 1711 aa23.53■■□□□ 1.36
LSM5-207ENST00000410044 PHLDB1Q86UU1 1377 aa23.52■■□□□ 1.36
LSM5-207ENST00000410044 PREX2Q70Z35 1606 aa23.51■■□□□ 1.35
LSM5-207ENST00000410044 PPRC1Q5VV67 1664 aaKnown RBP23.51■■□□□ 1.35
LSM5-207ENST00000410044 MYOM3Q5VTT5 1437 aa23.5■■□□□ 1.35
LSM5-207ENST00000410044 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms