RNA–Protein interactions for RNA: ENST00000409908.5

MDH1-203, Transcript of malate dehydrogenase 1, humanhuman

TSL 3 BASIC

Gene MDH1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-203ENST00000409908 PPP4R3CPQ6ZMV5 832 aa18.12■□□□□ 0.49
MDH1-203ENST00000409908 MAGI1Q96QZ7 1491 aaPredicted RBP18.1■□□□□ 0.49
MDH1-203ENST00000409908 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
MDH1-203ENST00000409908 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
MDH1-203ENST00000409908 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
MDH1-203ENST00000409908 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
MDH1-203ENST00000409908 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
MDH1-203ENST00000409908 ADAMTS12P58397 1594 aa18■□□□□ 0.47
MDH1-203ENST00000409908 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
MDH1-203ENST00000409908 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
MDH1-203ENST00000409908 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
MDH1-203ENST00000409908 CYB5RLQ6IPT4 315 aa17.95■□□□□ 0.46
MDH1-203ENST00000409908 CNKSR2Q8WXI2 1034 aa17.94■□□□□ 0.46
MDH1-203ENST00000409908 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
MDH1-203ENST00000409908 CEP170Q5SW79 1584 aa17.92■□□□□ 0.46
MDH1-203ENST00000409908 JPH4Q96JJ6 628 aa17.92■□□□□ 0.46
MDH1-203ENST00000409908 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
MDH1-203ENST00000409908 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
MDH1-203ENST00000409908 CUL7Q14999 1698 aa17.88■□□□□ 0.45
MDH1-203ENST00000409908 NUP160Q12769 1436 aa17.87■□□□□ 0.45
MDH1-203ENST00000409908 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
MDH1-203ENST00000409908 CLASP1Q7Z460 1538 aa17.87■□□□□ 0.45
MDH1-203ENST00000409908 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
MDH1-203ENST00000409908 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
MDH1-203ENST00000409908 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
MDH1-203ENST00000409908 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
MDH1-203ENST00000409908 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
MDH1-203ENST00000409908 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
MDH1-203ENST00000409908 PRG4Q92954 1404 aaPredicted RBP17.79■□□□□ 0.44
MDH1-203ENST00000409908 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
MDH1-203ENST00000409908 P3H3Q8IVL6 736 aa17.78■□□□□ 0.44
MDH1-203ENST00000409908 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.43
MDH1-203ENST00000409908 EEA1Q15075 1411 aa17.76■□□□□ 0.43
MDH1-203ENST00000409908 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
MDH1-203ENST00000409908 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
MDH1-203ENST00000409908 SHROOM2Q13796 1616 aa17.67■□□□□ 0.42
MDH1-203ENST00000409908 IQGAP2Q13576 1575 aa17.66■□□□□ 0.42
MDH1-203ENST00000409908 CTTNBP2Q8WZ74 1663 aa17.62■□□□□ 0.41
MDH1-203ENST00000409908 PTPRGP23470 1445 aa17.6■□□□□ 0.41
MDH1-203ENST00000409908 CARMIL2Q6F5E8 1435 aa17.6■□□□□ 0.41
MDH1-203ENST00000409908 TRHP20396 242 aaPredicted RBP17.59■□□□□ 0.41
MDH1-203ENST00000409908 KIF21BO75037 1637 aa17.58■□□□□ 0.41
MDH1-203ENST00000409908 DISP1Q96F81 1524 aa17.58■□□□□ 0.41
MDH1-203ENST00000409908 TNIKQ9UKE5 1360 aa17.57■□□□□ 0.4
MDH1-203ENST00000409908 ARID3CA6NKF2 412 aa17.57■□□□□ 0.4
MDH1-203ENST00000409908 GOLGA3Q08378 1498 aa17.56■□□□□ 0.4
MDH1-203ENST00000409908 UGGT2Q9NYU1 1516 aa17.54■□□□□ 0.4
MDH1-203ENST00000409908 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
MDH1-203ENST00000409908 ATP1B4Q9UN42 357 aaPredicted RBP17.51■□□□□ 0.39
MDH1-203ENST00000409908 KIAA0556O60303 1618 aa17.49■□□□□ 0.39
MDH1-203ENST00000409908 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
MDH1-203ENST00000409908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
MDH1-203ENST00000409908 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
MDH1-203ENST00000409908 UACAQ9BZF9 1416 aa17.43■□□□□ 0.38
MDH1-203ENST00000409908 PLB1Q6P1J6 1458 aa17.43■□□□□ 0.38
MDH1-203ENST00000409908 ADCY10Q96PN6 1610 aa17.41■□□□□ 0.38
MDH1-203ENST00000409908 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
MDH1-203ENST00000409908 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
MDH1-203ENST00000409908 SAMD9Q5K651 1589 aa17.36■□□□□ 0.37
MDH1-203ENST00000409908 FAM69CQ0P6D2 419 aa17.36■□□□□ 0.37
MDH1-203ENST00000409908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.373e-7■□□□□ 11.3
MDH1-203ENST00000409908 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
MDH1-203ENST00000409908 CLIP1P30622 1438 aa17.32■□□□□ 0.36
MDH1-203ENST00000409908 ABCC2Q92887 1545 aa17.31■□□□□ 0.36
MDH1-203ENST00000409908 ABCA8O94911 1581 aa17.3■□□□□ 0.36
MDH1-203ENST00000409908 UHRF1BP1LA0JNW5 1464 aa17.29■□□□□ 0.36
MDH1-203ENST00000409908 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
MDH1-203ENST00000409908 ATP10BO94823 1461 aa17.27■□□□□ 0.36
MDH1-203ENST00000409908 ASXL2Q76L83 1435 aa17.27■□□□□ 0.35
MDH1-203ENST00000409908 ZCCHC11Q5TAX3 1644 aaKnown RBP17.26■□□□□ 0.35
MDH1-203ENST00000409908 CEP162Q5TB80 1403 aa17.26■□□□□ 0.35
MDH1-203ENST00000409908 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
MDH1-203ENST00000409908 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
MDH1-203ENST00000409908 PLEKHD1A6NEE1 506 aa17.23■□□□□ 0.35
MDH1-203ENST00000409908 TSPOAP1O95153 1857 aa17.2■□□□□ 0.34
MDH1-203ENST00000409908 NUP153P49790 1475 aaKnown RBP17.2■□□□□ 0.34
MDH1-203ENST00000409908 FMN1Q68DA7 1419 aa17.2■□□□□ 0.34
MDH1-203ENST00000409908 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
MDH1-203ENST00000409908 KIF13AQ9H1H9 1805 aa17.18■□□□□ 0.34
MDH1-203ENST00000409908 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
MDH1-203ENST00000409908 CDK13Q14004 1512 aaKnown RBP17.17■□□□□ 0.34
MDH1-203ENST00000409908 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
MDH1-203ENST00000409908 EPRSP07814 1512 aaKnown RBP17.12■□□□□ 0.33
MDH1-203ENST00000409908 DIP2BQ9P265 1576 aa17.12■□□□□ 0.33
MDH1-203ENST00000409908 LRRIQ1Q96JM4 1722 aa17.1■□□□□ 0.33
MDH1-203ENST00000409908 CDK11AQ9UQ88 783 aaPredicted RBP17.1■□□□□ 0.33
MDH1-203ENST00000409908 CASKIN1Q8WXD9 1431 aa17.1■□□□□ 0.33
MDH1-203ENST00000409908 PCF11O94913 1555 aaKnown RBP17.1■□□□□ 0.33
MDH1-203ENST00000409908 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
MDH1-203ENST00000409908 CD109Q6YHK3 1445 aa17.06■□□□□ 0.32
MDH1-203ENST00000409908 POTEHQ6S545 545 aa17.03■□□□□ 0.32
MDH1-203ENST00000409908 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
MDH1-203ENST00000409908 GLI2P10070 1586 aa17.02■□□□□ 0.31
MDH1-203ENST00000409908 APLP2Q06481 763 aa17■□□□□ 0.31
MDH1-203ENST00000409908 KANK4Q5T7N3 995 aaPredicted RBP17■□□□□ 0.31
MDH1-203ENST00000409908 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
MDH1-203ENST00000409908 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
MDH1-203ENST00000409908 MAGI3Q5TCQ9 1506 aa16.98■□□□□ 0.31
MDH1-203ENST00000409908 MAP3K4Q9Y6R4 1608 aa16.97■□□□□ 0.31
MDH1-203ENST00000409908 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms