RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 POLA1P09884 1462 aaPredicted RBP5.53□□□□□ -1.52
RGPD3-202ENST00000409886 HRCP23327 699 aa5.53□□□□□ -1.52
RGPD3-202ENST00000409886 ADAMTS12P58397 1594 aa5.53□□□□□ -1.52
RGPD3-202ENST00000409886 ADAMTSL3P82987 1691 aa5.53□□□□□ -1.52
RGPD3-202ENST00000409886 SCAF1Q9H7N4 1312 aaKnown RBP5.52□□□□□ -1.53
RGPD3-202ENST00000409886 PCGF6Q9BYE7 350 aa5.52□□□□□ -1.53
RGPD3-202ENST00000409886 ADCY10Q96PN6 1610 aa5.52□□□□□ -1.53
RGPD3-202ENST00000409886 AQRO60306 1485 aaKnown RBP eCLIP5.52□□□□□ -1.53
RGPD3-202ENST00000409886 PCF11O94913 1555 aaKnown RBP5.51□□□□□ -1.53
RGPD3-202ENST00000409886 TEX14Q8IWB6 1497 aa5.5□□□□□ -1.53
RGPD3-202ENST00000409886 GRIN2AQ12879 1464 aa5.49□□□□□ -1.53
RGPD3-202ENST00000409886 SRCAPQ6ZRS2 3230 aa5.47□□□□□ -1.53
RGPD3-202ENST00000409886 TSPOAP1O95153 1857 aa5.47□□□□□ -1.53
RGPD3-202ENST00000409886 UTRNP46939 3433 aa5.47□□□□□ -1.53
RGPD3-202ENST00000409886 PCNTO95613 3336 aa5.47□□□□□ -1.53
RGPD3-202ENST00000409886 LOC105371045A0A1W2PR82 267 aa5.46□□□□□ -1.54
RGPD3-202ENST00000409886 RUSC2Q8N2Y8 1516 aa5.46□□□□□ -1.54
RGPD3-202ENST00000409886 CFAP43Q8NDM7 1665 aa5.46□□□□□ -1.54
RGPD3-202ENST00000409886 ABCA10Q8WWZ4 1543 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 UHRF1BP1LA0JNW5 1464 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 PLB1Q6P1J6 1458 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 DISP3Q9P2K9 1392 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 ILDR2Q71H61 639 aa5.45□□□□□ -1.54
RGPD3-202ENST00000409886 BCORL1Q5H9F3 1711 aa5.44□□□□□ -1.54
RGPD3-202ENST00000409886 SOGA1O94964 1423 aa5.43□□□□□ -1.54
RGPD3-202ENST00000409886 ERICH3Q5RHP9 1530 aa5.43□□□□□ -1.54
RGPD3-202ENST00000409886 SUPT5HO00267 1087 aaKnown RBP5.41□□□□□ -1.54
RGPD3-202ENST00000409886 FGD5Q6ZNL6 1462 aa5.41□□□□□ -1.54
RGPD3-202ENST00000409886 PREX1Q8TCU6 1659 aa5.41□□□□□ -1.54
RGPD3-202ENST00000409886 CHMP7Q8WUX9 453 aaPredicted RBP5.41□□□□□ -1.54
RGPD3-202ENST00000409886 KIF21BO75037 1637 aa5.41□□□□□ -1.54
RGPD3-202ENST00000409886 MAGI3Q5TCQ9 1506 aa5.4□□□□□ -1.55
RGPD3-202ENST00000409886 CENPFP49454 3210 aa5.4□□□□□ -1.55
RGPD3-202ENST00000409886 FHAD1B1AJZ9 1412 aa5.39□□□□□ -1.55
RGPD3-202ENST00000409886 PTPRMP28827 1452 aa5.39□□□□□ -1.55
RGPD3-202ENST00000409886 FAM69CQ0P6D2 419 aa5.39□□□□□ -1.55
RGPD3-202ENST00000409886 RAD54L2Q9Y4B4 1467 aa5.39□□□□□ -1.55
RGPD3-202ENST00000409886 CUL7Q14999 1698 aa5.38□□□□□ -1.55
RGPD3-202ENST00000409886 ABCC2Q92887 1545 aa5.38□□□□□ -1.55
RGPD3-202ENST00000409886 CERKQ8TCT0 537 aa5.38□□□□□ -1.55
RGPD3-202ENST00000409886 ARAP3Q8WWN8 1544 aa5.37□□□□□ -1.55
RGPD3-202ENST00000409886 EPRSP07814 1512 aaKnown RBP5.37□□□□□ -1.55
RGPD3-202ENST00000409886 TTC37Q6PGP7 1564 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 CUX1P39880 1505 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 CCDC88BA6NC98 1476 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 PHLDB1Q86UU1 1377 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 BIVM-ERCC5R4GMW8 1640 aa5.36□□□□□ -1.55
RGPD3-202ENST00000409886 MED1Q15648 1581 aaPredicted RBP5.36□□□□□ -1.55
RGPD3-202ENST00000409886 PRG4Q92954 1404 aaPredicted RBP5.36□□□□□ -1.55
RGPD3-202ENST00000409886 CHIC1Q5VXU3 224 aa5.35□□□□□ -1.55
RGPD3-202ENST00000409886 PTPRTO14522 1441 aa5.35□□□□□ -1.55
RGPD3-202ENST00000409886 MADDQ8WXG6 1647 aa5.35□□□□□ -1.55
RGPD3-202ENST00000409886 NPM1P06748 294 aaKnown RBP eCLIP5.34□□□□□ -1.55
RGPD3-202ENST00000409886 FBLN2P98095 1184 aa5.34□□□□□ -1.55
RGPD3-202ENST00000409886 TDRD9Q8NDG6 1382 aaKnown RBP5.33□□□□□ -1.56
RGPD3-202ENST00000409886 RIMS1Q86UR5 1692 aaKnown RBP5.33□□□□□ -1.56
RGPD3-202ENST00000409886 ZCCHC11Q5TAX3 1644 aaKnown RBP5.33□□□□□ -1.56
RGPD3-202ENST00000409886 STRCQ7RTU9 1775 aa5.33□□□□□ -1.56
RGPD3-202ENST00000409886 KDM5BQ9UGL1 1544 aa5.33□□□□□ -1.56
RGPD3-202ENST00000409886 LTBP4Q8N2S1 1624 aa5.33□□□□□ -1.56
RGPD3-202ENST00000409886 ARHGEF40Q8TER5 1519 aa5.33□□□□□ -1.56
RGPD3-202ENST00000409886 COL17A1Q9UMD9 1497 aaPredicted RBP5.32□□□□□ -1.56
RGPD3-202ENST00000409886 NEUROD1Q13562 356 aa5.31□□□□□ -1.56
RGPD3-202ENST00000409886 ASXL2Q76L83 1435 aa5.31□□□□□ -1.56
RGPD3-202ENST00000409886 CFAP74Q9C0B2 1584 aa5.31□□□□□ -1.56
RGPD3-202ENST00000409886 EP400Q96L91 3159 aa5.3□□□□□ -1.56
RGPD3-202ENST00000409886 FER1L4A9Z1Z3 1794 aa5.29□□□□□ -1.56
RGPD3-202ENST00000409886 ZMYM4Q5VZL5 1548 aa5.29□□□□□ -1.56
RGPD3-202ENST00000409886 FRMPD1Q5SYB0 1578 aa5.27□□□□□ -1.57
RGPD3-202ENST00000409886 DMRT2Q9Y5R5 561 aa5.27□□□□□ -1.57
RGPD3-202ENST00000409886 ABCA9Q8IUA7 1624 aa5.26□□□□□ -1.57
RGPD3-202ENST00000409886 WDR7Q9Y4E6 1490 aa5.26□□□□□ -1.57
RGPD3-202ENST00000409886 YEATS2Q9ULM3 1422 aa5.25□□□□□ -1.57
RGPD3-202ENST00000409886 NEO1Q92859 1461 aa5.25□□□□□ -1.57
RGPD3-202ENST00000409886 FANCAO15360 1455 aa5.25□□□□□ -1.57
RGPD3-202ENST00000409886 ZNF142P52746 1687 aaPredicted RBP5.25□□□□□ -1.57
RGPD3-202ENST00000409886 RICTORQ6R327 1708 aa5.24□□□□□ -1.57
RGPD3-202ENST00000409886 EFCAB5A4FU69 1503 aa5.24□□□□□ -1.57
RGPD3-202ENST00000409886 ARHGEF12Q9NZN5 1544 aa5.24□□□□□ -1.57
RGPD3-202ENST00000409886 TNIKQ9UKE5 1360 aa5.23□□□□□ -1.57
RGPD3-202ENST00000409886 POGZQ7Z3K3 1410 aa5.23□□□□□ -1.57
RGPD3-202ENST00000409886 REREQ9P2R6 1566 aa5.23□□□□□ -1.57
RGPD3-202ENST00000409886 MROH2AA6NES4 1674 aa5.22□□□□□ -1.57
RGPD3-202ENST00000409886 UACAQ9BZF9 1416 aa5.22□□□□□ -1.57
RGPD3-202ENST00000409886 EHMT2Q96KQ7 1210 aa5.22□□□□□ -1.57
RGPD3-202ENST00000409886 MAGI2Q86UL8 1455 aa5.22□□□□□ -1.57
RGPD3-202ENST00000409886 CARMIL2Q6F5E8 1435 aa5.21□□□□□ -1.57
RGPD3-202ENST00000409886 JPH4Q96JJ6 628 aa5.21□□□□□ -1.58
RGPD3-202ENST00000409886 WRNQ14191 1432 aaPredicted RBP eCLIP5.21□□□□□ -1.58
RGPD3-202ENST00000409886 UGGT2Q9NYU1 1516 aa5.2□□□□□ -1.58
RGPD3-202ENST00000409886 CPS1P31327 1500 aa5.2□□□□□ -1.58
RGPD3-202ENST00000409886 KIAA0556O60303 1618 aa5.19□□□□□ -1.58
RGPD3-202ENST00000409886 PTPRGP23470 1445 aa5.19□□□□□ -1.58
RGPD3-202ENST00000409886 IQGAP2Q13576 1575 aa5.19□□□□□ -1.58
RGPD3-202ENST00000409886 ABCA8O94911 1581 aa5.18□□□□□ -1.58
RGPD3-202ENST00000409886 SYNMO15061 1565 aa5.18□□□□□ -1.58
RGPD3-202ENST00000409886 CD109Q6YHK3 1445 aa5.17□□□□□ -1.58
RGPD3-202ENST00000409886 PLA2R1Q13018 1463 aa5.17□□□□□ -1.58
RGPD3-202ENST00000409886 FHOD3Q2V2M9 1422 aa5.16□□□□□ -1.58
RGPD3-202ENST00000409886 ZFYVE16Q7Z3T8 1539 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms