RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 TSHZ2Q9NRE2 1034 aa24.01■■□□□ 1.43
SYNC-202ENST00000409190 CARMIL1Q5VZK9 1371 aa24■■□□□ 1.43
SYNC-202ENST00000409190 SETD5Q9C0A6 1442 aa23.96■■□□□ 1.43
SYNC-202ENST00000409190 NCAPD3P42695 1498 aa23.95■■□□□ 1.42
SYNC-202ENST00000409190 CFTRP13569 1480 aa23.92■■□□□ 1.42
SYNC-202ENST00000409190 MAPKBP1O60336 1514 aa23.9■■□□□ 1.42
SYNC-202ENST00000409190 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
SYNC-202ENST00000409190 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
SYNC-202ENST00000409190 ANP32CO43423 234 aa23.84■■□□□ 1.41
SYNC-202ENST00000409190 LRRC9Q6ZRR7 1453 aa23.84■■□□□ 1.41
SYNC-202ENST00000409190 NEFLP07196 543 aa23.84■■□□□ 1.41
SYNC-202ENST00000409190 ARID3CA6NKF2 412 aa23.83■■□□□ 1.41
SYNC-202ENST00000409190 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
SYNC-202ENST00000409190 TIAM1Q13009 1591 aa23.81■■□□□ 1.4
SYNC-202ENST00000409190 IRX6P78412 446 aaPredicted RBP23.79■■□□□ 1.4
SYNC-202ENST00000409190 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
SYNC-202ENST00000409190 PPP1R15AO75807 674 aaPredicted RBP23.78■■□□□ 1.4
SYNC-202ENST00000409190 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
SYNC-202ENST00000409190 CADPSQ9ULU8 1353 aa23.76■■□□□ 1.39
SYNC-202ENST00000409190 TONSLQ96HA7 1378 aa23.75■■□□□ 1.39
SYNC-202ENST00000409190 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
SYNC-202ENST00000409190 CNGB1Q14028 1251 aaPredicted RBP23.74■■□□□ 1.39
SYNC-202ENST00000409190 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
SYNC-202ENST00000409190 RRP7BPQ9NSQ0 103 aa23.69■■□□□ 1.38
SYNC-202ENST00000409190 MTUS2Q5JR59 1369 aa23.67■■□□□ 1.38
SYNC-202ENST00000409190 PCF11O94913 1555 aaKnown RBP23.66■■□□□ 1.38
SYNC-202ENST00000409190 HNRNPUQ00839 825 aaKnown RBP eCLIP23.66■■□□□ 1.38
SYNC-202ENST00000409190 ANP32EQ9BTT0 268 aa23.62■■□□□ 1.37
SYNC-202ENST00000409190 FOXD1Q16676 465 aa23.58■■□□□ 1.37
SYNC-202ENST00000409190 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
SYNC-202ENST00000409190 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
SYNC-202ENST00000409190 RBM19Q9Y4C8 960 aaKnown RBP23.57■■□□□ 1.36
SYNC-202ENST00000409190 NESP48681 1621 aa23.54■■□□□ 1.36
SYNC-202ENST00000409190 SENP3-EIF4A1A0A087X0R7 540 aa23.53■■□□□ 1.36
SYNC-202ENST00000409190 PTPRKQ15262 1439 aa23.53■■□□□ 1.36
SYNC-202ENST00000409190 CCER2I3L3R5 266 aa23.52■■□□□ 1.36
SYNC-202ENST00000409190 CCDC18Q5T9S5 1454 aa23.52■■□□□ 1.35
SYNC-202ENST00000409190 FGD6Q6ZV73 1430 aa23.51■■□□□ 1.35
SYNC-202ENST00000409190 TIMELESSQ9UNS1 1208 aa23.5■■□□□ 1.35
SYNC-202ENST00000409190 MAP3K1Q13233 1512 aa23.49■■□□□ 1.35
SYNC-202ENST00000409190 POLR3GLQ9BT43 218 aa23.48■■□□□ 1.35
SYNC-202ENST00000409190 HSPA5P11021 654 aaKnown RBP23.47■■□□□ 1.35
SYNC-202ENST00000409190 FAM9BQ8IZU0 186 aa23.47■■□□□ 1.35
SYNC-202ENST00000409190 CASKIN1Q8WXD9 1431 aa23.45■■□□□ 1.35
SYNC-202ENST00000409190 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
SYNC-202ENST00000409190 CCDC184Q52MB2 194 aa23.44■■□□□ 1.34
SYNC-202ENST00000409190 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
SYNC-202ENST00000409190 FYCO1Q9BQS8 1478 aa23.41■■□□□ 1.34
SYNC-202ENST00000409190 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
SYNC-202ENST00000409190 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.33
SYNC-202ENST00000409190 FMN1Q68DA7 1419 aa23.38■■□□□ 1.33
SYNC-202ENST00000409190 CFAP43Q8NDM7 1665 aa23.37■■□□□ 1.33
SYNC-202ENST00000409190 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
SYNC-202ENST00000409190 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
SYNC-202ENST00000409190 ZNF326Q5BKZ1 582 aaKnown RBP23.35■■□□□ 1.33
SYNC-202ENST00000409190 NAIPQ13075 1403 aa23.35■■□□□ 1.33
SYNC-202ENST00000409190 NCOA2Q15596 1464 aa23.35■■□□□ 1.33
SYNC-202ENST00000409190 EIF4G2P78344 907 aaKnown RBP eCLIP23.33■■□□□ 1.33
SYNC-202ENST00000409190 L3MBTL2Q969R5 705 aa23.33■■□□□ 1.32
SYNC-202ENST00000409190 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.32
SYNC-202ENST00000409190 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
SYNC-202ENST00000409190 C11orf95C9JLR9 678 aaPredicted RBP23.31■■□□□ 1.32
SYNC-202ENST00000409190 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
SYNC-202ENST00000409190 ABCA10Q8WWZ4 1543 aa23.29■■□□□ 1.32
SYNC-202ENST00000409190 CDK11AQ9UQ88 783 aaPredicted RBP23.29■■□□□ 1.32
SYNC-202ENST00000409190 MYOM3Q5VTT5 1437 aa23.29■■□□□ 1.32
SYNC-202ENST00000409190 MPHOSPH9Q99550 1183 aa23.27■■□□□ 1.32
SYNC-202ENST00000409190 MSH5O43196 834 aa23.26■■□□□ 1.31
SYNC-202ENST00000409190 B4GALNT3Q6L9W6 998 aa23.26■■□□□ 1.31
SYNC-202ENST00000409190 ERICH6Q7L0X2 663 aa23.26■■□□□ 1.31
SYNC-202ENST00000409190 SNAPC4Q5SXM2 1469 aa23.25■■□□□ 1.31
SYNC-202ENST00000409190 PTPN23Q9H3S7 1636 aa23.25■■□□□ 1.31
SYNC-202ENST00000409190 EFCAB5A4FU69 1503 aa23.24■■□□□ 1.31
SYNC-202ENST00000409190 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
SYNC-202ENST00000409190 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
SYNC-202ENST00000409190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.23■■□□□ 1.31
SYNC-202ENST00000409190 ZNF644Q9H582 1327 aaPredicted RBP23.21■■□□□ 1.31
SYNC-202ENST00000409190 ZNF777Q9ULD5 760 aaPredicted RBP23.18■■□□□ 1.3
SYNC-202ENST00000409190 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
SYNC-202ENST00000409190 SLC4A1APQ9BWU0 796 aaKnown RBP23.18■■□□□ 1.3
SYNC-202ENST00000409190 GAPVD1Q14C86 1478 aa23.18■■□□□ 1.3
SYNC-202ENST00000409190 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
SYNC-202ENST00000409190 PRKRIP1Q9H875 184 aaPredicted RBP23.15■■□□□ 1.3
SYNC-202ENST00000409190 BCL11AQ9H165 835 aa23.13■■□□□ 1.29
SYNC-202ENST00000409190 MAGI3Q5TCQ9 1506 aa23.11■■□□□ 1.29
SYNC-202ENST00000409190 CTTNBP2Q8WZ74 1663 aa23.11■■□□□ 1.29
SYNC-202ENST00000409190 CDK13Q14004 1512 aaKnown RBP23.1■■□□□ 1.29
SYNC-202ENST00000409190 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
SYNC-202ENST00000409190 KDM6BO15054 1643 aa23.08■■□□□ 1.29
SYNC-202ENST00000409190 CUL7Q14999 1698 aa23.07■■□□□ 1.28
SYNC-202ENST00000409190 KDM5BQ9UGL1 1544 aa23.06■■□□□ 1.28
SYNC-202ENST00000409190 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
SYNC-202ENST00000409190 PPP4R2Q9NY27 417 aa23.06■■□□□ 1.28
SYNC-202ENST00000409190 LRRIQ1Q96JM4 1722 aa23.05■■□□□ 1.28
SYNC-202ENST00000409190 DENND4BO75064 1496 aaPredicted RBP23.04■■□□□ 1.28
SYNC-202ENST00000409190 SUPT6HQ7KZ85 1726 aaKnown RBP23.04■■□□□ 1.28
SYNC-202ENST00000409190 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
SYNC-202ENST00000409190 CNTLNQ9NXG0 1405 aa23.04■■□□□ 1.28
SYNC-202ENST00000409190 SALL2Q9Y467 1007 aaPredicted RBP23.03■■□□□ 1.28
SYNC-202ENST00000409190 EHBP1L1Q8N3D4 1523 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms