RNA–Protein interactions for RNA: ENST00000409056.3

TMEFF2-203, Transcript of transmembrane protein with EGF like and two follistatin like domains 2, humanhuman

TSL 1 (best) BASIC

Gene TMEFF2, Length 3,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF2-203ENST00000409056 KIF27Q86VH2 1401 aa10.01□□□□□ -0.81
TMEFF2-203ENST00000409056 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
TMEFF2-203ENST00000409056 PPP1R15AO75807 674 aaPredicted RBP10□□□□□ -0.81
TMEFF2-203ENST00000409056 MYT1Q01538 1121 aa10□□□□□ -0.81
TMEFF2-203ENST00000409056 CUX2O14529 1486 aa10□□□□□ -0.81
TMEFF2-203ENST00000409056 IGF1RP08069 1367 aa9.99□□□□□ -0.81
TMEFF2-203ENST00000409056 ANP32EQ9BTT0 268 aa9.99□□□□□ -0.81
TMEFF2-203ENST00000409056 SETD5Q9C0A6 1442 aa9.97□□□□□ -0.81
TMEFF2-203ENST00000409056 RBM19Q9Y4C8 960 aaKnown RBP9.97□□□□□ -0.81
TMEFF2-203ENST00000409056 FHOD3Q2V2M9 1422 aa9.96□□□□□ -0.81
TMEFF2-203ENST00000409056 MSH5O43196 834 aa9.95□□□□□ -0.82
TMEFF2-203ENST00000409056 CNGB1Q14028 1251 aaPredicted RBP9.95□□□□□ -0.82
TMEFF2-203ENST00000409056 TIAM1Q13009 1591 aa9.95□□□□□ -0.82
TMEFF2-203ENST00000409056 LRRC9Q6ZRR7 1453 aa9.94□□□□□ -0.82
TMEFF2-203ENST00000409056 ARID3CA6NKF2 412 aa9.94□□□□□ -0.82
TMEFF2-203ENST00000409056 CCDC184Q52MB2 194 aa9.94□□□□□ -0.82
TMEFF2-203ENST00000409056 CARMIL1Q5VZK9 1371 aa9.93□□□□□ -0.82
TMEFF2-203ENST00000409056 PCF11O94913 1555 aaKnown RBP9.92□□□□□ -0.82
TMEFF2-203ENST00000409056 PTPRKQ15262 1439 aa9.92□□□□□ -0.82
TMEFF2-203ENST00000409056 FOXD1Q16676 465 aa9.91□□□□□ -0.82
TMEFF2-203ENST00000409056 CHIC2Q9UKJ5 165 aa9.91□□□□□ -0.82
TMEFF2-203ENST00000409056 AQRO60306 1485 aaKnown RBP eCLIP9.9□□□□□ -0.82
TMEFF2-203ENST00000409056 CFTRP13569 1480 aa9.9□□□□□ -0.82
TMEFF2-203ENST00000409056 RAD54L2Q9Y4B4 1467 aa9.9□□□□□ -0.82
TMEFF2-203ENST00000409056 FGD5Q6ZNL6 1462 aa9.9□□□□□ -0.82
TMEFF2-203ENST00000409056 BCL11AQ9H165 835 aa9.89□□□□□ -0.83
TMEFF2-203ENST00000409056 ANP32CO43423 234 aa9.89□□□□□ -0.83
TMEFF2-203ENST00000409056 HNRNPUQ00839 825 aaKnown RBP eCLIP9.88□□□□□ -0.83
TMEFF2-203ENST00000409056 RRP7BPQ9NSQ0 103 aa9.88□□□□□ -0.83
TMEFF2-203ENST00000409056 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
TMEFF2-203ENST00000409056 C11orf95C9JLR9 678 aaPredicted RBP9.86□□□□□ -0.83
TMEFF2-203ENST00000409056 NEFLP07196 543 aa9.85□□□□□ -0.83
TMEFF2-203ENST00000409056 TONSLQ96HA7 1378 aa9.84□□□□□ -0.83
TMEFF2-203ENST00000409056 DNAJC5BQ9UF47 199 aa9.83□□□□□ -0.84
TMEFF2-203ENST00000409056 WASHC2AQ641Q2 1341 aa9.83□□□□□ -0.84
TMEFF2-203ENST00000409056 NESP48681 1621 aa9.82□□□□□ -0.84
TMEFF2-203ENST00000409056 HSPA5P11021 654 aaKnown RBP9.81□□□□□ -0.84
TMEFF2-203ENST00000409056 FAM9BQ8IZU0 186 aa9.81□□□□□ -0.84
TMEFF2-203ENST00000409056 HMGXB3Q12766 1538 aa9.81□□□□□ -0.84
TMEFF2-203ENST00000409056 CCDC18Q5T9S5 1454 aa9.81□□□□□ -0.84
TMEFF2-203ENST00000409056 B4GALNT3Q6L9W6 998 aa9.8□□□□□ -0.84
TMEFF2-203ENST00000409056 CFAP43Q8NDM7 1665 aa9.79□□□□□ -0.84
TMEFF2-203ENST00000409056 KDM5BQ9UGL1 1544 aa9.79□□□□□ -0.84
TMEFF2-203ENST00000409056 FGD6Q6ZV73 1430 aa9.79□□□□□ -0.84
TMEFF2-203ENST00000409056 CCER2I3L3R5 266 aa9.79□□□□□ -0.84
TMEFF2-203ENST00000409056 CADPSQ9ULU8 1353 aa9.79□□□□□ -0.84
TMEFF2-203ENST00000409056 LRRIQ1Q96JM4 1722 aa9.79□□□□□ -0.84
TMEFF2-203ENST00000409056 KDM6BO15054 1643 aa9.78□□□□□ -0.84
TMEFF2-203ENST00000409056 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
TMEFF2-203ENST00000409056 DENND4BO75064 1496 aaPredicted RBP9.77□□□□□ -0.85
TMEFF2-203ENST00000409056 MTUS2Q5JR59 1369 aa9.77□□□□□ -0.85
TMEFF2-203ENST00000409056 FHAD1B1AJZ9 1412 aa9.76□□□□□ -0.85
TMEFF2-203ENST00000409056 NAIPQ13075 1403 aa9.76□□□□□ -0.85
TMEFF2-203ENST00000409056 POLR3GLQ9BT43 218 aa9.75□□□□□ -0.85
TMEFF2-203ENST00000409056 PTPN23Q9H3S7 1636 aa9.75□□□□□ -0.85
TMEFF2-203ENST00000409056 MAP3K1Q13233 1512 aa9.74□□□□□ -0.85
TMEFF2-203ENST00000409056 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
TMEFF2-203ENST00000409056 NBPF8Q3BBV2 869 aa9.74□□□□□ -0.85
TMEFF2-203ENST00000409056 L3MBTL2Q969R5 705 aa9.74□□□□□ -0.85
TMEFF2-203ENST00000409056 POLA1P09884 1462 aaPredicted RBP9.74□□□□□ -0.85
TMEFF2-203ENST00000409056 MAGI3Q5TCQ9 1506 aa9.74□□□□□ -0.85
TMEFF2-203ENST00000409056 CASKIN1Q8WXD9 1431 aa9.73□□□□□ -0.85
TMEFF2-203ENST00000409056 SNAPC4Q5SXM2 1469 aa9.73□□□□□ -0.85
TMEFF2-203ENST00000409056 NCOA2Q15596 1464 aa9.72□□□□□ -0.85
TMEFF2-203ENST00000409056 UACAQ9BZF9 1416 aa9.72□□□□□ -0.85
TMEFF2-203ENST00000409056 ZNF644Q9H582 1327 aaPredicted RBP9.72□□□□□ -0.85
TMEFF2-203ENST00000409056 FYCO1Q9BQS8 1478 aa9.71□□□□□ -0.85
TMEFF2-203ENST00000409056 HFM1A2PYH4 1435 aa9.71□□□□□ -0.85
TMEFF2-203ENST00000409056 ZNF326Q5BKZ1 582 aaKnown RBP9.7□□□□□ -0.86
TMEFF2-203ENST00000409056 MRS2Q9HD23 443 aa9.7□□□□□ -0.86
TMEFF2-203ENST00000409056 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
TMEFF2-203ENST00000409056 TOPBP1Q92547 1522 aa9.69□□□□□ -0.86
TMEFF2-203ENST00000409056 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
TMEFF2-203ENST00000409056 NBR1Q14596 966 aa9.69□□□□□ -0.86
TMEFF2-203ENST00000409056 CDK11AQ9UQ88 783 aaPredicted RBP9.69□□□□□ -0.86
TMEFF2-203ENST00000409056 AKNAQ7Z591 1439 aa9.68□□□□□ -0.86
TMEFF2-203ENST00000409056 MPHOSPH9Q99550 1183 aa9.68□□□□□ -0.86
TMEFF2-203ENST00000409056 PRKRIP1Q9H875 184 aaPredicted RBP9.68□□□□□ -0.86
TMEFF2-203ENST00000409056 TIMELESSQ9UNS1 1208 aa9.68□□□□□ -0.86
TMEFF2-203ENST00000409056 MYOM3Q5VTT5 1437 aa9.67□□□□□ -0.86
TMEFF2-203ENST00000409056 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
TMEFF2-203ENST00000409056 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMEFF2-203ENST00000409056 CC2D2AQ9P2K1 1620 aa9.66□□□□□ -0.86
TMEFF2-203ENST00000409056 SALL2Q9Y467 1007 aaPredicted RBP9.65□□□□□ -0.86
TMEFF2-203ENST00000409056 ABCA10Q8WWZ4 1543 aa9.65□□□□□ -0.86
TMEFF2-203ENST00000409056 SKAP1Q86WV1 359 aa9.65□□□□□ -0.86
TMEFF2-203ENST00000409056 KIF7Q2M1P5 1343 aa9.65□□□□□ -0.86
TMEFF2-203ENST00000409056 CTTNBP2Q8WZ74 1663 aa9.65□□□□□ -0.86
TMEFF2-203ENST00000409056 URB2Q14146 1524 aaKnown RBP9.64□□□□□ -0.87
TMEFF2-203ENST00000409056 CCDC7Q96M83 1385 aa9.64□□□□□ -0.87
TMEFF2-203ENST00000409056 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
TMEFF2-203ENST00000409056 GRIN2BQ13224 1484 aa9.64□□□□□ -0.87
TMEFF2-203ENST00000409056 CNTLNQ9NXG0 1405 aa9.63□□□□□ -0.87
TMEFF2-203ENST00000409056 ERICH6Q7L0X2 663 aa9.63□□□□□ -0.87
TMEFF2-203ENST00000409056 PPP4R2Q9NY27 417 aa9.62□□□□□ -0.87
TMEFF2-203ENST00000409056 FANCIQ9NVI1 1328 aa9.62□□□□□ -0.87
TMEFF2-203ENST00000409056 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
TMEFF2-203ENST00000409056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.61□□□□□ -0.87
TMEFF2-203ENST00000409056 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
TMEFF2-203ENST00000409056 UGGT2Q9NYU1 1516 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms