RNA–Protein interactions for RNA: ENST00000409056.3

TMEFF2-203, Transcript of transmembrane protein with EGF like and two follistatin like domains 2, humanhuman

TSL 1 (best) BASIC

Gene TMEFF2, Length 3,364 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF2-203ENST00000409056 NISCHQ9Y2I1 1504 aa13.84□□□□□ -0.19
TMEFF2-203ENST00000409056 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.41
TMEFF2-203ENST00000409056 SUPT5HO00267 1087 aaKnown RBP12.25□□□□□ -0.45
TMEFF2-203ENST00000409056 MYO15BQ96JP2 1530 aa11.98□□□□□ -0.49
TMEFF2-203ENST00000409056 DCAF8L2P0C7V8 631 aa11.9□□□□□ -0.5
TMEFF2-203ENST00000409056 PPARGC1BQ86YN6 1023 aaKnown RBP11.87□□□□□ -0.51
TMEFF2-203ENST00000409056 PCGF6Q9BYE7 350 aa11.83□□□□□ -0.52
TMEFF2-203ENST00000409056 CHIC1Q5VXU3 224 aa11.83□□□□□ -0.52
TMEFF2-203ENST00000409056 HRCP23327 699 aa11.78□□□□□ -0.52
TMEFF2-203ENST00000409056 LOC105371045A0A1W2PR82 267 aa11.73□□□□□ -0.53
TMEFF2-203ENST00000409056 ZCCHC6Q5VYS8 1495 aaKnown RBP11.72□□□□□ -0.53
TMEFF2-203ENST00000409056 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
TMEFF2-203ENST00000409056 CCDC180Q9P1Z9 1646 aa11.43□□□□□ -0.58
TMEFF2-203ENST00000409056 FAM9AQ8IZU1 332 aaPredicted RBP11.41□□□□□ -0.58
TMEFF2-203ENST00000409056 DCAF1Q9Y4B6 1507 aa11.31□□□□□ -0.6
TMEFF2-203ENST00000409056 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
TMEFF2-203ENST00000409056 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
TMEFF2-203ENST00000409056 SCRIBQ14160 1630 aa11.17□□□□□ -0.62
TMEFF2-203ENST00000409056 TTBK1Q5TCY1 1321 aaPredicted RBP11.16□□□□□ -0.62
TMEFF2-203ENST00000409056 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
TMEFF2-203ENST00000409056 RB1CC1Q8TDY2 1594 aa11.14□□□□□ -0.63
TMEFF2-203ENST00000409056 RSF1Q96T23 1441 aaPredicted RBP11.14□□□□□ -0.63
TMEFF2-203ENST00000409056 ABCC9O60706 1549 aa11.1□□□□□ -0.63
TMEFF2-203ENST00000409056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
TMEFF2-203ENST00000409056 CECR2Q9BXF3 1484 aa11.02□□□□□ -0.65
TMEFF2-203ENST00000409056 NEUROD1Q13562 356 aa10.93□□□□□ -0.66
TMEFF2-203ENST00000409056 MROH2BQ7Z745 1585 aa10.92□□□□□ -0.66
TMEFF2-203ENST00000409056 ZEB1P37275 1124 aaPredicted RBP10.91□□□□□ -0.66
TMEFF2-203ENST00000409056 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
TMEFF2-203ENST00000409056 WIZO95785 1651 aa10.9□□□□□ -0.66
TMEFF2-203ENST00000409056 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
TMEFF2-203ENST00000409056 GTF3C3Q9Y5Q9 886 aa10.81□□□□□ -0.68
TMEFF2-203ENST00000409056 ACIN1Q9UKV3 1341 aaKnown RBP10.8□□□□□ -0.68
TMEFF2-203ENST00000409056 YTHDC1Q96MU7 727 aaKnown RBP10.79□□□□□ -0.68
TMEFF2-203ENST00000409056 DIEXFQ68CQ4 756 aaKnown RBP10.79□□□□□ -0.68
TMEFF2-203ENST00000409056 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.68
TMEFF2-203ENST00000409056 RUSC2Q8N2Y8 1516 aa10.75□□□□□ -0.69
TMEFF2-203ENST00000409056 SOGA1O94964 1423 aa10.75□□□□□ -0.69
TMEFF2-203ENST00000409056 RANGAP1P46060 587 aaPredicted RBP10.74□□□□□ -0.69
TMEFF2-203ENST00000409056 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
TMEFF2-203ENST00000409056 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
TMEFF2-203ENST00000409056 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
TMEFF2-203ENST00000409056 CEP162Q5TB80 1403 aa10.68□□□□□ -0.7
TMEFF2-203ENST00000409056 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.71
TMEFF2-203ENST00000409056 MIER1Q8N108 512 aa10.63□□□□□ -0.71
TMEFF2-203ENST00000409056 BAZ1AQ9NRL2 1556 aaPredicted RBP10.63□□□□□ -0.71
TMEFF2-203ENST00000409056 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
TMEFF2-203ENST00000409056 NACADO15069 1562 aa10.6□□□□□ -0.71
TMEFF2-203ENST00000409056 ZNF316A6NFI3 1004 aaPredicted RBP10.57□□□□□ -0.72
TMEFF2-203ENST00000409056 CSRNP3Q8WYN3 585 aa10.57□□□□□ -0.72
TMEFF2-203ENST00000409056 CENPBP07199 599 aaPredicted RBP10.56□□□□□ -0.72
TMEFF2-203ENST00000409056 SMARCA2P51531 1590 aa10.55□□□□□ -0.72
TMEFF2-203ENST00000409056 WRNQ14191 1432 aaPredicted RBP eCLIP10.53□□□□□ -0.72
TMEFF2-203ENST00000409056 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.73
TMEFF2-203ENST00000409056 TOP2AP11388 1531 aaKnown RBP10.51□□□□□ -0.73
TMEFF2-203ENST00000409056 SMARCA4P51532 1647 aa10.5□□□□□ -0.73
TMEFF2-203ENST00000409056 UNC13AQ9UPW8 1703 aa10.46□□□□□ -0.74
TMEFF2-203ENST00000409056 SYNJ1O43426 1573 aa10.43□□□□□ -0.74
TMEFF2-203ENST00000409056 GOLGA3Q08378 1498 aa10.42□□□□□ -0.74
TMEFF2-203ENST00000409056 RAPGEF2Q9Y4G8 1499 aa10.42□□□□□ -0.74
TMEFF2-203ENST00000409056 KCNH8Q96L42 1107 aa10.42□□□□□ -0.74
TMEFF2-203ENST00000409056 CLIP1P30622 1438 aa10.41□□□□□ -0.74
TMEFF2-203ENST00000409056 KANK4Q5T7N3 995 aaPredicted RBP10.4□□□□□ -0.74
TMEFF2-203ENST00000409056 ITGAEP38570 1179 aa10.4□□□□□ -0.75
TMEFF2-203ENST00000409056 APLP2Q06481 763 aa10.32□□□□□ -0.76
TMEFF2-203ENST00000409056 VPS8Q8N3P4 1428 aa10.32□□□□□ -0.76
TMEFF2-203ENST00000409056 KIF21BO75037 1637 aa10.31□□□□□ -0.76
TMEFF2-203ENST00000409056 CEP164Q9UPV0 1460 aa10.31□□□□□ -0.76
TMEFF2-203ENST00000409056 BCANQ96GW7 911 aa10.31□□□□□ -0.76
TMEFF2-203ENST00000409056 BICRAQ9NZM4 1560 aa10.3□□□□□ -0.76
TMEFF2-203ENST00000409056 DHX57Q6P158 1386 aaKnown RBP10.3□□□□□ -0.76
TMEFF2-203ENST00000409056 HIRIP3Q9BW71 556 aaPredicted RBP10.3□□□□□ -0.76
TMEFF2-203ENST00000409056 SUPT16HQ9Y5B9 1047 aaKnown RBP10.3□□□□□ -0.76
TMEFF2-203ENST00000409056 EEA1Q15075 1411 aa10.29□□□□□ -0.76
TMEFF2-203ENST00000409056 ARAP1Q96P48 1450 aa10.24□□□□□ -0.77
TMEFF2-203ENST00000409056 SIN3AQ96ST3 1273 aa10.22□□□□□ -0.77
TMEFF2-203ENST00000409056 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.77
TMEFF2-203ENST00000409056 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
TMEFF2-203ENST00000409056 BAZ1BQ9UIG0 1483 aaKnown RBP10.2□□□□□ -0.78
TMEFF2-203ENST00000409056 P3H3Q8IVL6 736 aa10.19□□□□□ -0.78
TMEFF2-203ENST00000409056 DDX10Q13206 875 aaKnown RBP10.17□□□□□ -0.78
TMEFF2-203ENST00000409056 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.79
TMEFF2-203ENST00000409056 TRIM52Q96A61 297 aa10.14□□□□□ -0.79
TMEFF2-203ENST00000409056 RAB3GAP2Q9H2M9 1393 aa10.13□□□□□ -0.79
TMEFF2-203ENST00000409056 TOP2BQ02880 1626 aa10.13□□□□□ -0.79
TMEFF2-203ENST00000409056 PRXQ9BXM0 1461 aa10.12□□□□□ -0.79
TMEFF2-203ENST00000409056 PEG3Q9GZU2 1588 aa10.12□□□□□ -0.79
TMEFF2-203ENST00000409056 CUX1P39880 1505 aa10.12□□□□□ -0.79
TMEFF2-203ENST00000409056 FKBP8Q14318 412 aa10.11□□□□□ -0.79
TMEFF2-203ENST00000409056 FAM50AQ14320 339 aaKnown RBP10.11□□□□□ -0.79
TMEFF2-203ENST00000409056 ARHGAP35Q9NRY4 1499 aa10.11□□□□□ -0.79
TMEFF2-203ENST00000409056 CCNB3Q8WWL7 1395 aa10.11□□□□□ -0.79
TMEFF2-203ENST00000409056 MAPKBP1O60336 1514 aa10.1□□□□□ -0.79
TMEFF2-203ENST00000409056 WDR97A6NE52 1622 aa10.09□□□□□ -0.79
TMEFF2-203ENST00000409056 RRBP1Q9P2E9 1410 aaKnown RBP10.08□□□□□ -0.8
TMEFF2-203ENST00000409056 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
TMEFF2-203ENST00000409056 PHLDB1Q86UU1 1377 aa10.07□□□□□ -0.8
TMEFF2-203ENST00000409056 BIVM-ERCC5R4GMW8 1640 aa10.04□□□□□ -0.8
TMEFF2-203ENST00000409056 CLSPNQ9HAW4 1339 aa10.02□□□□□ -0.81
TMEFF2-203ENST00000409056 ERICH3Q5RHP9 1530 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms