RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 DDX10Q13206 875 aaKnown RBP3.87□□□□□ -1.79
SNORD88.1-201ENST00000408684 RAB3GAP2Q9H2M9 1393 aa3.87□□□□□ -1.79
SNORD88.1-201ENST00000408684 BIVM-ERCC5R4GMW8 1640 aa3.86□□□□□ -1.79
SNORD88.1-201ENST00000408684 PPM1GO15355 546 aaPredicted RBP3.86□□□□□ -1.79
SNORD88.1-201ENST00000408684 ZBTB47Q9UFB7 747 aaPredicted RBP3.86□□□□□ -1.79
SNORD88.1-201ENST00000408684 NOP58Q9Y2X3 529 aaKnown RBP3.86□□□□□ -1.79
SNORD88.1-201ENST00000408684 ARAP1Q96P48 1450 aa3.86□□□□□ -1.79
SNORD88.1-201ENST00000408684 DEKP35659 375 aaKnown RBP3.85□□□□□ -1.79
SNORD88.1-201ENST00000408684 BCANQ96GW7 911 aa3.85□□□□□ -1.79
SNORD88.1-201ENST00000408684 HNRNPUQ00839 825 aaKnown RBP eCLIP3.84□□□□□ -1.79
SNORD88.1-201ENST00000408684 DDRGK1Q96HY6 314 aa3.84□□□□□ -1.79
SNORD88.1-201ENST00000408684 IPO9Q96P70 1041 aaKnown RBP3.84□□□□□ -1.79
SNORD88.1-201ENST00000408684 ZBED9Q6R2W3 1325 aa3.84□□□□□ -1.79
SNORD88.1-201ENST00000408684 AQRO60306 1485 aaKnown RBP eCLIP3.84□□□□□ -1.8
SNORD88.1-201ENST00000408684 CCDC18Q5T9S5 1454 aa3.84□□□□□ -1.8
SNORD88.1-201ENST00000408684 TIAM1Q13009 1591 aa3.84□□□□□ -1.8
SNORD88.1-201ENST00000408684 EIF4G2P78344 907 aaKnown RBP eCLIP3.83□□□□□ -1.8
SNORD88.1-201ENST00000408684 ARID4BQ4LE39 1312 aaPredicted RBP3.83□□□□□ -1.8
SNORD88.1-201ENST00000408684 UACAQ9BZF9 1416 aa3.83□□□□□ -1.8
SNORD88.1-201ENST00000408684 LRRC9Q6ZRR7 1453 aa3.83□□□□□ -1.8
SNORD88.1-201ENST00000408684 ARHGAP35Q9NRY4 1499 aa3.83□□□□□ -1.8
SNORD88.1-201ENST00000408684 ATAD2BQ9ULI0 1458 aa3.83□□□□□ -1.8
SNORD88.1-201ENST00000408684 MAPKBP1O60336 1514 aa3.83□□□□□ -1.8
SNORD88.1-201ENST00000408684 EFCAB5A4FU69 1503 aa3.82□□□□□ -1.8
SNORD88.1-201ENST00000408684 KTN1Q86UP2 1357 aaKnown RBP3.82□□□□□ -1.8
SNORD88.1-201ENST00000408684 MS4A1P11836 297 aa3.82□□□□□ -1.8
SNORD88.1-201ENST00000408684 GLIPR1L2Q4G1C9 344 aa3.82□□□□□ -1.8
SNORD88.1-201ENST00000408684 KANK4Q5T7N3 995 aaPredicted RBP3.82□□□□□ -1.8
SNORD88.1-201ENST00000408684 TRIM52Q96A61 297 aa3.82□□□□□ -1.8
SNORD88.1-201ENST00000408684 CUX1P39880 1505 aa3.81□□□□□ -1.8
SNORD88.1-201ENST00000408684 FYCO1Q9BQS8 1478 aa3.81□□□□□ -1.8
SNORD88.1-201ENST00000408684 FMN1Q68DA7 1419 aa3.81□□□□□ -1.8
SNORD88.1-201ENST00000408684 TCERG1O14776 1098 aaKnown RBP3.81□□□□□ -1.8
SNORD88.1-201ENST00000408684 MSH5O43196 834 aa3.81□□□□□ -1.8
SNORD88.1-201ENST00000408684 DAXXQ9UER7 740 aaPredicted RBP3.81□□□□□ -1.8
SNORD88.1-201ENST00000408684 WDR97A6NE52 1622 aa3.81□□□□□ -1.8
SNORD88.1-201ENST00000408684 HMGXB3Q12766 1538 aa3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 HFM1A2PYH4 1435 aa3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 AKNAQ7Z591 1439 aa3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 CNTLNQ9NXG0 1405 aa3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 ROCK2O75116 1388 aaKnown RBP3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 C11orf95C9JLR9 678 aaPredicted RBP3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 PRKCSHP14314 528 aaPredicted RBP3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 ITGAEP38570 1179 aa3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 PDE3BQ13370 1112 aa3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 FAM50AQ14320 339 aaKnown RBP3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 CCDC136Q96JN2 1154 aa3.8□□□□□ -1.8
SNORD88.1-201ENST00000408684 SMG6Q86US8 1419 aaKnown RBP3.79□□□□□ -1.8
SNORD88.1-201ENST00000408684 CASKIN1Q8WXD9 1431 aa3.79□□□□□ -1.8
SNORD88.1-201ENST00000408684 NUDCQ9Y266 331 aa3.79□□□□□ -1.8
SNORD88.1-201ENST00000408684 THOC2Q8NI27 1593 aaKnown RBP3.79□□□□□ -1.8
SNORD88.1-201ENST00000408684 NCAPD3P42695 1498 aa3.79□□□□□ -1.8
SNORD88.1-201ENST00000408684 NCOA2Q15596 1464 aa3.79□□□□□ -1.8
SNORD88.1-201ENST00000408684 CFAP43Q8NDM7 1665 aa3.78□□□□□ -1.8
SNORD88.1-201ENST00000408684 KCNH8Q96L42 1107 aa3.78□□□□□ -1.8
SNORD88.1-201ENST00000408684 RSPH6AQ9H0K4 717 aa3.78□□□□□ -1.8
SNORD88.1-201ENST00000408684 MRS2Q9HD23 443 aa3.78□□□□□ -1.8
SNORD88.1-201ENST00000408684 CFTRP13569 1480 aa3.78□□□□□ -1.8
SNORD88.1-201ENST00000408684 FGD5Q6ZNL6 1462 aa3.78□□□□□ -1.8
SNORD88.1-201ENST00000408684 INSRP06213 1382 aa3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 CARMIL1Q5VZK9 1371 aa3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 RNF123Q5XPI4 1314 aa3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 WASHC2AQ641Q2 1341 aa3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 RANGAP1P46060 587 aaPredicted RBP3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 UBE2Q2Q8WVN8 375 aa3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 SIN3AQ96ST3 1273 aa3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 PRKRIP1Q9H875 184 aaPredicted RBP3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 FGD6Q6ZV73 1430 aa3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 MIA2Q96PC5 1412 aa3.77□□□□□ -1.81
SNORD88.1-201ENST00000408684 IGF1RP08069 1367 aa3.76□□□□□ -1.81
SNORD88.1-201ENST00000408684 MTUS2Q5JR59 1369 aa3.76□□□□□ -1.81
SNORD88.1-201ENST00000408684 PHLDB1Q86UU1 1377 aa3.76□□□□□ -1.81
SNORD88.1-201ENST00000408684 WASHC2CQ9Y4E1 1318 aa3.76□□□□□ -1.81
SNORD88.1-201ENST00000408684 NBR1Q14596 966 aa3.76□□□□□ -1.81
SNORD88.1-201ENST00000408684 NCOA1Q15788 1441 aa3.76□□□□□ -1.81
SNORD88.1-201ENST00000408684 CCDC7Q96M83 1385 aa3.76□□□□□ -1.81
SNORD88.1-201ENST00000408684 ZMYM4Q5VZL5 1548 aa3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 NEFMP07197 916 aa3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 HSPA5P11021 654 aaKnown RBP3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 GSE1Q14687 1217 aa3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 RALBP1Q15311 655 aa3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 MYOM3Q5VTT5 1437 aa3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 BICRAQ9NZM4 1560 aa3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 UNC13AQ9UPW8 1703 aa3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 EHBP1L1Q8N3D4 1523 aa3.75□□□□□ -1.81
SNORD88.1-201ENST00000408684 ABCA5Q8WWZ7 1642 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 PTPN23Q9H3S7 1636 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 CC2D2AQ9P2K1 1620 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 NAIPQ13075 1403 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 L1TD1Q5T7N2 865 aaKnown RBP3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 B4GALNT3Q6L9W6 998 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 FAM9BQ8IZU0 186 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 FAM43AQ8N2R8 423 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 TMC1Q8TDI8 760 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 CUL7Q14999 1698 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 BRD4O60885 1362 aaPredicted RBP3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 ROCK1Q13464 1354 aa3.74□□□□□ -1.81
SNORD88.1-201ENST00000408684 HECW1Q76N89 1606 aa3.73□□□□□ -1.81
SNORD88.1-201ENST00000408684 SLC24A1O60721 1099 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms