RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 NISCHQ9Y2I1 1504 aa5.27□□□□□ -1.57
SNORD88.1-201ENST00000408684 PELP1Q8IZL8 1130 aaKnown RBP4.76□□□□□ -1.65
SNORD88.1-201ENST00000408684 MYT1Q01538 1121 aa4.69□□□□□ -1.66
SNORD88.1-201ENST00000408684 HRCP23327 699 aa4.67□□□□□ -1.66
SNORD88.1-201ENST00000408684 ZEB1P37275 1124 aaPredicted RBP4.61□□□□□ -1.67
SNORD88.1-201ENST00000408684 DCAF1Q9Y4B6 1507 aa4.54□□□□□ -1.68
SNORD88.1-201ENST00000408684 TRIM26Q12899 539 aaPredicted RBP4.5□□□□□ -1.69
SNORD88.1-201ENST00000408684 SUPT5HO00267 1087 aaKnown RBP4.49□□□□□ -1.69
SNORD88.1-201ENST00000408684 PCGF6Q9BYE7 350 aa4.49□□□□□ -1.69
SNORD88.1-201ENST00000408684 CHIC1Q5VXU3 224 aa4.48□□□□□ -1.69
SNORD88.1-201ENST00000408684 ZCCHC6Q5VYS8 1495 aaKnown RBP4.48□□□□□ -1.69
SNORD88.1-201ENST00000408684 CCDC180Q9P1Z9 1646 aa4.46□□□□□ -1.69
SNORD88.1-201ENST00000408684 SHROOM4Q9ULL8 1493 aa4.43□□□□□ -1.7
SNORD88.1-201ENST00000408684 TTBK1Q5TCY1 1321 aaPredicted RBP4.43□□□□□ -1.7
SNORD88.1-201ENST00000408684 CENPBP07199 599 aaPredicted RBP4.41□□□□□ -1.7
SNORD88.1-201ENST00000408684 MYO15BQ96JP2 1530 aa4.36□□□□□ -1.71
SNORD88.1-201ENST00000408684 PPARGC1BQ86YN6 1023 aaKnown RBP4.34□□□□□ -1.71
SNORD88.1-201ENST00000408684 CLSPNQ9HAW4 1339 aa4.34□□□□□ -1.71
SNORD88.1-201ENST00000408684 ACIN1Q9UKV3 1341 aaKnown RBP4.32□□□□□ -1.72
SNORD88.1-201ENST00000408684 SCAF1Q9H7N4 1312 aaKnown RBP4.3□□□□□ -1.72
SNORD88.1-201ENST00000408684 TRIM41Q8WV44 630 aa4.28□□□□□ -1.72
SNORD88.1-201ENST00000408684 LOC105371045A0A1W2PR82 267 aa4.26□□□□□ -1.73
SNORD88.1-201ENST00000408684 DCAF8L2P0C7V8 631 aa4.25□□□□□ -1.73
SNORD88.1-201ENST00000408684 DIEXFQ68CQ4 756 aaKnown RBP4.25□□□□□ -1.73
SNORD88.1-201ENST00000408684 CCER1Q8TC90 406 aaPredicted RBP4.25□□□□□ -1.73
SNORD88.1-201ENST00000408684 ABCC9O60706 1549 aa4.25□□□□□ -1.73
SNORD88.1-201ENST00000408684 RB1CC1Q8TDY2 1594 aa4.23□□□□□ -1.73
SNORD88.1-201ENST00000408684 GTF3C3Q9Y5Q9 886 aa4.23□□□□□ -1.73
SNORD88.1-201ENST00000408684 ZNF316A6NFI3 1004 aaPredicted RBP4.21□□□□□ -1.74
SNORD88.1-201ENST00000408684 NEUROD1Q13562 356 aa4.2□□□□□ -1.74
SNORD88.1-201ENST00000408684 WRNQ14191 1432 aaPredicted RBP eCLIP4.2□□□□□ -1.74
SNORD88.1-201ENST00000408684 EEA1Q15075 1411 aa4.2□□□□□ -1.74
SNORD88.1-201ENST00000408684 RSF1Q96T23 1441 aaPredicted RBP4.2□□□□□ -1.74
SNORD88.1-201ENST00000408684 MYT1LQ9UL68 1186 aa4.15□□□□□ -1.75
SNORD88.1-201ENST00000408684 TNIKQ9UKE5 1360 aa4.14□□□□□ -1.75
SNORD88.1-201ENST00000408684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.13□□□□□ -1.75
SNORD88.1-201ENST00000408684 NACADO15069 1562 aa4.12□□□□□ -1.75
SNORD88.1-201ENST00000408684 APLP2Q06481 763 aa4.12□□□□□ -1.75
SNORD88.1-201ENST00000408684 FAM9AQ8IZU1 332 aaPredicted RBP4.11□□□□□ -1.75
SNORD88.1-201ENST00000408684 ANP32EQ9BTT0 268 aa4.11□□□□□ -1.75
SNORD88.1-201ENST00000408684 GOLGA3Q08378 1498 aa4.08□□□□□ -1.76
SNORD88.1-201ENST00000408684 CEP162Q5TB80 1403 aa4.08□□□□□ -1.76
SNORD88.1-201ENST00000408684 BAZ1AQ9NRL2 1556 aaPredicted RBP4.08□□□□□ -1.76
SNORD88.1-201ENST00000408684 NEFLP07196 543 aa4.07□□□□□ -1.76
SNORD88.1-201ENST00000408684 CSRNP3Q8WYN3 585 aa4.07□□□□□ -1.76
SNORD88.1-201ENST00000408684 SCRIBQ14160 1630 aa4.06□□□□□ -1.76
SNORD88.1-201ENST00000408684 ERICH6Q7L0X2 663 aa4.06□□□□□ -1.76
SNORD88.1-201ENST00000408684 TIMELESSQ9UNS1 1208 aa4.06□□□□□ -1.76
SNORD88.1-201ENST00000408684 BAZ1BQ9UIG0 1483 aaKnown RBP4.05□□□□□ -1.76
SNORD88.1-201ENST00000408684 CEP164Q9UPV0 1460 aa4.05□□□□□ -1.76
SNORD88.1-201ENST00000408684 UBTFP17480 764 aaKnown RBP4.05□□□□□ -1.76
SNORD88.1-201ENST00000408684 MIER1Q8N108 512 aa4.05□□□□□ -1.76
SNORD88.1-201ENST00000408684 YTHDC1Q96MU7 727 aaKnown RBP4.05□□□□□ -1.76
SNORD88.1-201ENST00000408684 ERICH6BQ5W0A0 696 aa4.04□□□□□ -1.76
SNORD88.1-201ENST00000408684 SUPT16HQ9Y5B9 1047 aaKnown RBP4.04□□□□□ -1.76
SNORD88.1-201ENST00000408684 TOP2AP11388 1531 aaKnown RBP4.04□□□□□ -1.76
SNORD88.1-201ENST00000408684 VPS8Q8N3P4 1428 aa4.03□□□□□ -1.76
SNORD88.1-201ENST00000408684 MROH2BQ7Z745 1585 aa4.02□□□□□ -1.77
SNORD88.1-201ENST00000408684 KIF21BO75037 1637 aa4.02□□□□□ -1.77
SNORD88.1-201ENST00000408684 EIF4G1Q04637 1599 aaKnown RBP4.02□□□□□ -1.77
SNORD88.1-201ENST00000408684 CCER2I3L3R5 266 aa4.01□□□□□ -1.77
SNORD88.1-201ENST00000408684 BCL11AQ9H165 835 aa4.01□□□□□ -1.77
SNORD88.1-201ENST00000408684 TSHZ2Q9NRE2 1034 aa4□□□□□ -1.77
SNORD88.1-201ENST00000408684 CLIP1P30622 1438 aa4□□□□□ -1.77
SNORD88.1-201ENST00000408684 CDK11AQ9UQ88 783 aaPredicted RBP3.99□□□□□ -1.77
SNORD88.1-201ENST00000408684 CUX2O14529 1486 aa3.98□□□□□ -1.77
SNORD88.1-201ENST00000408684 CECR2Q9BXF3 1484 aa3.98□□□□□ -1.77
SNORD88.1-201ENST00000408684 FANCIQ9NVI1 1328 aa3.98□□□□□ -1.77
SNORD88.1-201ENST00000408684 WIZO95785 1651 aa3.98□□□□□ -1.77
SNORD88.1-201ENST00000408684 HNRNPUL2Q1KMD3 747 aaKnown RBP3.98□□□□□ -1.77
SNORD88.1-201ENST00000408684 CCDC88BA6NC98 1476 aa3.98□□□□□ -1.77
SNORD88.1-201ENST00000408684 ANP32CO43423 234 aa3.97□□□□□ -1.77
SNORD88.1-201ENST00000408684 EHMT2Q96KQ7 1210 aa3.97□□□□□ -1.77
SNORD88.1-201ENST00000408684 SOGA1O94964 1423 aa3.96□□□□□ -1.77
SNORD88.1-201ENST00000408684 ERICH3Q5RHP9 1530 aa3.96□□□□□ -1.78
SNORD88.1-201ENST00000408684 DHX57Q6P158 1386 aaKnown RBP3.96□□□□□ -1.78
SNORD88.1-201ENST00000408684 SMARCA2P51531 1590 aa3.96□□□□□ -1.78
SNORD88.1-201ENST00000408684 RRBP1Q9P2E9 1410 aaKnown RBP3.95□□□□□ -1.78
SNORD88.1-201ENST00000408684 MAP3K1Q13233 1512 aa3.95□□□□□ -1.78
SNORD88.1-201ENST00000408684 SMARCA4P51532 1647 aa3.95□□□□□ -1.78
SNORD88.1-201ENST00000408684 RBM19Q9Y4C8 960 aaKnown RBP3.95□□□□□ -1.78
SNORD88.1-201ENST00000408684 FKBP8Q14318 412 aa3.94□□□□□ -1.78
SNORD88.1-201ENST00000408684 ABCC8Q09428 1581 aa3.93□□□□□ -1.78
SNORD88.1-201ENST00000408684 PEG3Q9GZU2 1588 aa3.93□□□□□ -1.78
SNORD88.1-201ENST00000408684 CCNB3Q8WWL7 1395 aa3.93□□□□□ -1.78
SNORD88.1-201ENST00000408684 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.92□□□□□ -1.78
SNORD88.1-201ENST00000408684 RTL5Q5HYW3 569 aaPredicted RBP3.91□□□□□ -1.78
SNORD88.1-201ENST00000408684 SETD5Q9C0A6 1442 aa3.91□□□□□ -1.78
SNORD88.1-201ENST00000408684 PPP4R2Q9NY27 417 aa3.91□□□□□ -1.78
SNORD88.1-201ENST00000408684 FHAD1B1AJZ9 1412 aa3.9□□□□□ -1.78
SNORD88.1-201ENST00000408684 USP35Q9P2H5 1018 aa3.9□□□□□ -1.79
SNORD88.1-201ENST00000408684 KIF27Q86VH2 1401 aa3.89□□□□□ -1.79
SNORD88.1-201ENST00000408684 ANP32AP39687 249 aaKnown RBP3.89□□□□□ -1.79
SNORD88.1-201ENST00000408684 PRXQ9BXM0 1461 aa3.89□□□□□ -1.79
SNORD88.1-201ENST00000408684 TOP2BQ02880 1626 aa3.88□□□□□ -1.79
SNORD88.1-201ENST00000408684 PPP1R15AO75807 674 aaPredicted RBP3.88□□□□□ -1.79
SNORD88.1-201ENST00000408684 SYNJ1O43426 1573 aa3.88□□□□□ -1.79
SNORD88.1-201ENST00000408684 TONSLQ96HA7 1378 aa3.88□□□□□ -1.79
SNORD88.1-201ENST00000408684 RAPGEF2Q9Y4G8 1499 aa3.87□□□□□ -1.79
SNORD88.1-201ENST00000408684 RUSC2Q8N2Y8 1516 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms