RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 PEG3Q9GZU2 1588 aa4.27□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 CCNB3Q8WWL7 1395 aa4.27□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 RAPGEF2Q9Y4G8 1499 aa4.26□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 TOP2BQ02880 1626 aa4.26□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 DDX10Q13206 875 aaKnown RBP4.26□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 RTL5Q5HYW3 569 aaPredicted RBP4.26□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 POLR1AO95602 1720 aaPredicted RBP4.26□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 C11orf95C9JLR9 678 aaPredicted RBP4.25□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 SETD5Q9C0A6 1442 aa4.25□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 USP35Q9P2H5 1018 aa4.25□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 RAB3GAP2Q9H2M9 1393 aa4.25□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 WASHC2AQ641Q2 1341 aa4.24□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 UNC13AQ9UPW8 1703 aa4.24□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 TRIM52Q96A61 297 aa4.24□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 SALL2Q9Y467 1007 aaPredicted RBP4.24□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 CFAP43Q8NDM7 1665 aa4.24□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 NCAPD3P42695 1498 aa4.24□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 PRXQ9BXM0 1461 aa4.24□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 TIAM1Q13009 1591 aa4.23□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 ANP32AP39687 249 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 IPO9Q96P70 1041 aaKnown RBP4.23□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 WASHC2CQ9Y4E1 1318 aa4.22□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 FHAD1B1AJZ9 1412 aa4.22□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 ZBTB47Q9UFB7 747 aaPredicted RBP4.22□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 NCOA2Q15596 1464 aa4.22□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 ABCA5Q8WWZ7 1642 aa4.21□□□□□ -1.73
RNU6ATAC40P-201ENST00000408580 HNRNPUQ00839 825 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 NBR1Q14596 966 aa4.21□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 KANK4Q5T7N3 995 aaPredicted RBP4.21□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 CCDC136Q96JN2 1154 aa4.21□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.21□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 PPM1GO15355 546 aaPredicted RBP4.2□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 PAK3O75914 559 aaPredicted RBP4.2□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 ZBED9Q6R2W3 1325 aa4.2□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 ARHGAP35Q9NRY4 1499 aa4.19□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 IL27Q8NEV9 243 aa4.19□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 SMG6Q86US8 1419 aaKnown RBP4.19□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 CNTLNQ9NXG0 1405 aa4.19□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 RNF123Q5XPI4 1314 aa4.19□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 LRRC9Q6ZRR7 1453 aa4.18□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 TONSLQ96HA7 1378 aa4.18□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 IRX6P78412 446 aaPredicted RBP4.18□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 RSPH6AQ9H0K4 717 aa4.18□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 PRDM2Q13029 1718 aa4.18□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 KDM5BQ9UGL1 1544 aa4.17□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 B4GALNT3Q6L9W6 998 aa4.17□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 SIN3AQ96ST3 1273 aa4.17□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 UACAQ9BZF9 1416 aa4.17□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 HECW1Q76N89 1606 aa4.17□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 MS4A1P11836 297 aa4.16□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 GLIPR1L2Q4G1C9 344 aa4.16□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 FAM43AQ8N2R8 423 aa4.16□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 DDRGK1Q96HY6 314 aa4.16□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 PTPN23Q9H3S7 1636 aa4.16□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 GCC2Q8IWJ2 1684 aa4.16□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 KIF27Q86VH2 1401 aa4.15□□□□□ -1.74
RNU6ATAC40P-201ENST00000408580 TCERG1O14776 1098 aaKnown RBP4.15□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 CCDC18Q5T9S5 1454 aa4.15□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 NCOA1Q15788 1441 aa4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 AQRO60306 1485 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 NEFMP07197 916 aa4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 GSE1Q14687 1217 aa4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 PKNOX2Q96KN3 472 aa4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 NUDCQ9Y266 331 aa4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 PCF11O94913 1555 aaKnown RBP4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 VIRMAQ69YN4 1812 aaKnown RBP4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 PHLDB1Q86UU1 1377 aa4.14□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 HFM1A2PYH4 1435 aa4.13□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 EFCAB5A4FU69 1503 aa4.13□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 CUX1P39880 1505 aa4.13□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 EIF5BO60841 1220 aaKnown RBP4.13□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 PRKRIP1Q9H875 184 aaPredicted RBP4.13□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 RTN4Q9NQC3 1192 aaKnown RBP4.13□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 FYCO1Q9BQS8 1478 aa4.12□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 EIF4G2P78344 907 aaKnown RBP eCLIP4.12□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 HIRIP3Q9BW71 556 aaPredicted RBP4.12□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 MRS2Q9HD23 443 aa4.12□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 CCDC7Q96M83 1385 aa4.12□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 AKNAQ7Z591 1439 aa4.12□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 ATAD2BQ9ULI0 1458 aa4.11□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 KIF21AQ7Z4S6 1674 aa4.11□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 CTTNBP2Q8WZ74 1663 aa4.11□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 HSPA5P11021 654 aaKnown RBP4.11□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 PDE4AP27815 886 aa4.11□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 BACH2Q9BYV9 841 aa4.11□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 FMN1Q68DA7 1419 aa4.11□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 FGD6Q6ZV73 1430 aa4.11□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 THOC2Q8NI27 1593 aaKnown RBP4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 BICRAQ9NZM4 1560 aa4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 SUPT6HQ7KZ85 1726 aaKnown RBP4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 RANGAP1P46060 587 aaPredicted RBP4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 FAM50AQ14320 339 aaKnown RBP4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 FAM9BQ8IZU0 186 aa4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 BRPF3Q9ULD4 1205 aa4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 NAIPQ13075 1403 aa4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 CASKIN1Q8WXD9 1431 aa4.1□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 NFKBIBQ15653 356 aa4.09□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 CCDC184Q52MB2 194 aa4.09□□□□□ -1.75
RNU6ATAC40P-201ENST00000408580 FRAT1Q92837 279 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms