RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-208ENST00000407417 CEP170Q5SW79 1584 aa13.27□□□□□ -0.29
NFIA-208ENST00000407417 NUP160Q12769 1436 aa13.27□□□□□ -0.29
NFIA-208ENST00000407417 RUSC2Q8N2Y8 1516 aa13.25□□□□□ -0.29
NFIA-208ENST00000407417 TRIM26Q12899 539 aaPredicted RBP13.23□□□□□ -0.29
NFIA-208ENST00000407417 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
NFIA-208ENST00000407417 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
NFIA-208ENST00000407417 CHIC1Q5VXU3 224 aa13.22□□□□□ -0.29
NFIA-208ENST00000407417 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
NFIA-208ENST00000407417 CUL7Q14999 1698 aa13.21□□□□□ -0.3
NFIA-208ENST00000407417 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
NFIA-208ENST00000407417 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
NFIA-208ENST00000407417 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
NFIA-208ENST00000407417 ACIN1Q9UKV3 1341 aaKnown RBP13.13□□□□□ -0.31
NFIA-208ENST00000407417 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
NFIA-208ENST00000407417 RAPGEF2Q9Y4G8 1499 aa13.12□□□□□ -0.31
NFIA-208ENST00000407417 KIAA0586Q9BVV6 1533 aa13.12□□□□□ -0.31
NFIA-208ENST00000407417 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
NFIA-208ENST00000407417 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
NFIA-208ENST00000407417 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
NFIA-208ENST00000407417 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
NFIA-208ENST00000407417 CENPBP07199 599 aaPredicted RBP13.02□□□□□ -0.33
NFIA-208ENST00000407417 EEA1Q15075 1411 aa13.02□□□□□ -0.33
NFIA-208ENST00000407417 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
NFIA-208ENST00000407417 CARMIL2Q6F5E8 1435 aa12.98□□□□□ -0.33
NFIA-208ENST00000407417 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
NFIA-208ENST00000407417 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
NFIA-208ENST00000407417 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.33
NFIA-208ENST00000407417 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.34
NFIA-208ENST00000407417 PTPRGP23470 1445 aa12.95□□□□□ -0.34
NFIA-208ENST00000407417 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
NFIA-208ENST00000407417 NEUROD1Q13562 356 aa12.93□□□□□ -0.34
NFIA-208ENST00000407417 KIAA0556O60303 1618 aa12.92□□□□□ -0.34
NFIA-208ENST00000407417 ADCY10Q96PN6 1610 aa12.92□□□□□ -0.34
NFIA-208ENST00000407417 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
NFIA-208ENST00000407417 KIF21BO75037 1637 aa12.9□□□□□ -0.34
NFIA-208ENST00000407417 RANGAP1P46060 587 aaPredicted RBP12.89□□□□□ -0.35
NFIA-208ENST00000407417 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
NFIA-208ENST00000407417 GOLGA3Q08378 1498 aa12.88□□□□□ -0.35
NFIA-208ENST00000407417 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
NFIA-208ENST00000407417 UACAQ9BZF9 1416 aa12.86□□□□□ -0.35
NFIA-208ENST00000407417 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
NFIA-208ENST00000407417 ABCC2Q92887 1545 aa12.83□□□□□ -0.36
NFIA-208ENST00000407417 UHRF1BP1LA0JNW5 1464 aa12.83□□□□□ -0.36
NFIA-208ENST00000407417 PLB1Q6P1J6 1458 aa12.83□□□□□ -0.36
NFIA-208ENST00000407417 MAPKBP1O60336 1514 aa12.82□□□□□ -0.36
NFIA-208ENST00000407417 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
NFIA-208ENST00000407417 ABCA8O94911 1581 aa12.79□□□□□ -0.36
NFIA-208ENST00000407417 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
NFIA-208ENST00000407417 FAM69CQ0P6D2 419 aa12.79□□□□□ -0.36
NFIA-208ENST00000407417 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
NFIA-208ENST00000407417 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
NFIA-208ENST00000407417 ASXL2Q76L83 1435 aa12.77□□□□□ -0.36
NFIA-208ENST00000407417 ARID3CA6NKF2 412 aa12.77□□□□□ -0.37
NFIA-208ENST00000407417 KIF13AQ9H1H9 1805 aa12.76□□□□□ -0.37
NFIA-208ENST00000407417 ZCCHC11Q5TAX3 1644 aaKnown RBP12.76□□□□□ -0.37
NFIA-208ENST00000407417 DIP2BQ9P265 1576 aa12.76□□□□□ -0.37
NFIA-208ENST00000407417 EFCAB5A4FU69 1503 aa12.74□□□□□ -0.37
NFIA-208ENST00000407417 CLSPNQ9HAW4 1339 aa12.71□□□□□ -0.37
NFIA-208ENST00000407417 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.37
NFIA-208ENST00000407417 LOC105371045A0A1W2PR82 267 aa12.71□□□□□ -0.38
NFIA-208ENST00000407417 RAPGEF6Q8TEU7 1601 aa12.71□□□□□ -0.38
NFIA-208ENST00000407417 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
NFIA-208ENST00000407417 ATP10BO94823 1461 aa12.7□□□□□ -0.38
NFIA-208ENST00000407417 EPRSP07814 1512 aaKnown RBP12.69□□□□□ -0.38
NFIA-208ENST00000407417 WDR7Q9Y4E6 1490 aa12.69□□□□□ -0.38
NFIA-208ENST00000407417 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
NFIA-208ENST00000407417 NUP153P49790 1475 aaKnown RBP12.68□□□□□ -0.38
NFIA-208ENST00000407417 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
NFIA-208ENST00000407417 GLI2P10070 1586 aa12.66□□□□□ -0.38
NFIA-208ENST00000407417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
NFIA-208ENST00000407417 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
NFIA-208ENST00000407417 TSPOAP1O95153 1857 aa12.65□□□□□ -0.38
NFIA-208ENST00000407417 ATP1B4Q9UN42 357 aaPredicted RBP12.64□□□□□ -0.39
NFIA-208ENST00000407417 FMN1Q68DA7 1419 aa12.63□□□□□ -0.39
NFIA-208ENST00000407417 CLIP1P30622 1438 aa12.62□□□□□ -0.39
NFIA-208ENST00000407417 PPRC1Q5VV67 1664 aaKnown RBP12.61□□□□□ -0.39
NFIA-208ENST00000407417 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
NFIA-208ENST00000407417 MAP3K4Q9Y6R4 1608 aa12.61□□□□□ -0.39
NFIA-208ENST00000407417 CDK13Q14004 1512 aaKnown RBP12.61□□□□□ -0.39
NFIA-208ENST00000407417 CD109Q6YHK3 1445 aa12.58□□□□□ -0.4
NFIA-208ENST00000407417 PLEKHD1A6NEE1 506 aa12.57□□□□□ -0.4
NFIA-208ENST00000407417 HECW1Q76N89 1606 aa12.57□□□□□ -0.4
NFIA-208ENST00000407417 CEP162Q5TB80 1403 aa12.56□□□□□ -0.4
NFIA-208ENST00000407417 PCF11O94913 1555 aaKnown RBP12.56□□□□□ -0.4
NFIA-208ENST00000407417 KDM6BO15054 1643 aa12.56□□□□□ -0.4
NFIA-208ENST00000407417 TEX14Q8IWB6 1497 aa12.55□□□□□ -0.4
NFIA-208ENST00000407417 CFAP43Q8NDM7 1665 aa12.55□□□□□ -0.4
NFIA-208ENST00000407417 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
NFIA-208ENST00000407417 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
NFIA-208ENST00000407417 MAGI3Q5TCQ9 1506 aa12.54□□□□□ -0.4
NFIA-208ENST00000407417 ABCA9Q8IUA7 1624 aa12.53□□□□□ -0.4
NFIA-208ENST00000407417 LRRIQ1Q96JM4 1722 aa12.52□□□□□ -0.4
NFIA-208ENST00000407417 ERICH6Q7L0X2 663 aa12.52□□□□□ -0.4
NFIA-208ENST00000407417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.5□□□□□ -0.414e-7■■■□□ 18.4
NFIA-208ENST00000407417 FYCO1Q9BQS8 1478 aa12.5□□□□□ -0.41
NFIA-208ENST00000407417 TTC37Q6PGP7 1564 aa12.49□□□□□ -0.41
NFIA-208ENST00000407417 CDK11AQ9UQ88 783 aaPredicted RBP12.49□□□□□ -0.41
NFIA-208ENST00000407417 CCDC18Q5T9S5 1454 aa12.48□□□□□ -0.41
NFIA-208ENST00000407417 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
NFIA-208ENST00000407417 KIF14Q15058 1648 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms