RNA–Protein interactions for RNA: ENST00000400790.3

ARID1B-204, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 2,887 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-204ENST00000400790 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
ARID1B-204ENST00000400790 CFAP43Q8NDM7 1665 aa17.97■□□□□ 0.47
ARID1B-204ENST00000400790 MAPKBP1O60336 1514 aa17.96■□□□□ 0.47
ARID1B-204ENST00000400790 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
ARID1B-204ENST00000400790 SETD5Q9C0A6 1442 aa17.92■□□□□ 0.46
ARID1B-204ENST00000400790 ITGAEP38570 1179 aa17.92■□□□□ 0.46
ARID1B-204ENST00000400790 PCF11O94913 1555 aaKnown RBP17.89■□□□□ 0.45
ARID1B-204ENST00000400790 PHLDB1Q86UU1 1377 aa17.88■□□□□ 0.45
ARID1B-204ENST00000400790 EFCAB5A4FU69 1503 aa17.83■□□□□ 0.45
ARID1B-204ENST00000400790 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.44
ARID1B-204ENST00000400790 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.44
ARID1B-204ENST00000400790 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
ARID1B-204ENST00000400790 FYCO1Q9BQS8 1478 aa17.82■□□□□ 0.44
ARID1B-204ENST00000400790 CTTNBP2Q8WZ74 1663 aa17.82■□□□□ 0.44
ARID1B-204ENST00000400790 ABCA10Q8WWZ4 1543 aa17.81■□□□□ 0.44
ARID1B-204ENST00000400790 CUL7Q14999 1698 aa17.81■□□□□ 0.44
ARID1B-204ENST00000400790 SUPT16HQ9Y5B9 1047 aaKnown RBP17.81■□□□□ 0.44
ARID1B-204ENST00000400790 AQRO60306 1485 aaKnown RBP eCLIP17.8■□□□□ 0.443e-7■■■■■ 29.1
ARID1B-204ENST00000400790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.8■□□□□ 0.447e-19■■■■■ 50.8
ARID1B-204ENST00000400790 TIMELESSQ9UNS1 1208 aa17.8■□□□□ 0.44
ARID1B-204ENST00000400790 WDR97A6NE52 1622 aa17.79■□□□□ 0.44
ARID1B-204ENST00000400790 CASKIN1Q8WXD9 1431 aa17.78■□□□□ 0.44
ARID1B-204ENST00000400790 FAM50AQ14320 339 aaKnown RBP17.77■□□□□ 0.44
ARID1B-204ENST00000400790 TSHZ2Q9NRE2 1034 aa17.76■□□□□ 0.43
ARID1B-204ENST00000400790 FHOD3Q2V2M9 1422 aa17.75■□□□□ 0.43
ARID1B-204ENST00000400790 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
ARID1B-204ENST00000400790 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
ARID1B-204ENST00000400790 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
ARID1B-204ENST00000400790 P3H3Q8IVL6 736 aa17.73■□□□□ 0.43
ARID1B-204ENST00000400790 SIN3AQ96ST3 1273 aa17.72■□□□□ 0.43
ARID1B-204ENST00000400790 FMN1Q68DA7 1419 aa17.7■□□□□ 0.42
ARID1B-204ENST00000400790 ATP1B4Q9UN42 357 aaPredicted RBP17.68■□□□□ 0.42
ARID1B-204ENST00000400790 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
ARID1B-204ENST00000400790 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
ARID1B-204ENST00000400790 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
ARID1B-204ENST00000400790 PPP1R15AO75807 674 aaPredicted RBP17.65■□□□□ 0.42
ARID1B-204ENST00000400790 DDX10Q13206 875 aaKnown RBP17.65■□□□□ 0.42
ARID1B-204ENST00000400790 LRRIQ1Q96JM4 1722 aa17.64■□□□□ 0.41
ARID1B-204ENST00000400790 SAMD9Q5K651 1589 aa17.64■□□□□ 0.41
ARID1B-204ENST00000400790 NESP48681 1621 aa17.6■□□□□ 0.41
ARID1B-204ENST00000400790 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
ARID1B-204ENST00000400790 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
ARID1B-204ENST00000400790 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
ARID1B-204ENST00000400790 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
ARID1B-204ENST00000400790 PTPN23Q9H3S7 1636 aa17.59■□□□□ 0.41
ARID1B-204ENST00000400790 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
ARID1B-204ENST00000400790 UACAQ9BZF9 1416 aa17.59■□□□□ 0.41
ARID1B-204ENST00000400790 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.4
ARID1B-204ENST00000400790 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.4
ARID1B-204ENST00000400790 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
ARID1B-204ENST00000400790 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
ARID1B-204ENST00000400790 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
ARID1B-204ENST00000400790 GRIN2BQ13224 1484 aa17.55■□□□□ 0.4
ARID1B-204ENST00000400790 TONSLQ96HA7 1378 aa17.55■□□□□ 0.4
ARID1B-204ENST00000400790 PTPRKQ15262 1439 aa17.55■□□□□ 0.4
ARID1B-204ENST00000400790 MYOM3Q5VTT5 1437 aa17.54■□□□□ 0.4
ARID1B-204ENST00000400790 NCOA2Q15596 1464 aa17.54■□□□□ 0.4
ARID1B-204ENST00000400790 EHBP1L1Q8N3D4 1523 aa17.53■□□□□ 0.4
ARID1B-204ENST00000400790 NAIPQ13075 1403 aa17.52■□□□□ 0.39
ARID1B-204ENST00000400790 ANP32CO43423 234 aa17.52■□□□□ 0.39
ARID1B-204ENST00000400790 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.39
ARID1B-204ENST00000400790 HIRIP3Q9BW71 556 aaPredicted RBP17.49■□□□□ 0.39
ARID1B-204ENST00000400790 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
ARID1B-204ENST00000400790 UGGT2Q9NYU1 1516 aa17.48■□□□□ 0.39
ARID1B-204ENST00000400790 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
ARID1B-204ENST00000400790 GCC2Q8IWJ2 1684 aa17.47■□□□□ 0.39
ARID1B-204ENST00000400790 KDM5BQ9UGL1 1544 aa17.45■□□□□ 0.38
ARID1B-204ENST00000400790 FKBP8Q14318 412 aa17.45■□□□□ 0.38
ARID1B-204ENST00000400790 HECW1Q76N89 1606 aa17.43■□□□□ 0.38
ARID1B-204ENST00000400790 TCOF1Q13428 1488 aaKnown RBP17.43■□□□□ 0.38
ARID1B-204ENST00000400790 ANO8Q9HCE9 1232 aaPredicted RBP17.42■□□□□ 0.38
ARID1B-204ENST00000400790 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
ARID1B-204ENST00000400790 MAGI3Q5TCQ9 1506 aa17.42■□□□□ 0.38
ARID1B-204ENST00000400790 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
ARID1B-204ENST00000400790 AKNAQ7Z591 1439 aa17.4■□□□□ 0.38
ARID1B-204ENST00000400790 NEFLP07196 543 aa17.4■□□□□ 0.38
ARID1B-204ENST00000400790 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
ARID1B-204ENST00000400790 TRIM52Q96A61 297 aa17.38■□□□□ 0.37
ARID1B-204ENST00000400790 BCANQ96GW7 911 aa17.38■□□□□ 0.37
ARID1B-204ENST00000400790 IQGAP2Q13576 1575 aa17.34■□□□□ 0.37
ARID1B-204ENST00000400790 DENND4BO75064 1496 aaPredicted RBP17.34■□□□□ 0.37
ARID1B-204ENST00000400790 MIA2Q96PC5 1412 aa17.34■□□□□ 0.37
ARID1B-204ENST00000400790 EPRSP07814 1512 aaKnown RBP17.33■□□□□ 0.37
ARID1B-204ENST00000400790 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
ARID1B-204ENST00000400790 KDM6BO15054 1643 aa17.31■□□□□ 0.36
ARID1B-204ENST00000400790 ADAMTS12P58397 1594 aa17.29■□□□□ 0.36
ARID1B-204ENST00000400790 WDR62O43379 1518 aa17.29■□□□□ 0.36
ARID1B-204ENST00000400790 HSPA5P11021 654 aaKnown RBP17.27■□□□□ 0.36
ARID1B-204ENST00000400790 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
ARID1B-204ENST00000400790 WASHC2AQ641Q2 1341 aa17.27■□□□□ 0.35
ARID1B-204ENST00000400790 RBM19Q9Y4C8 960 aaKnown RBP17.26■□□□□ 0.35
ARID1B-204ENST00000400790 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
ARID1B-204ENST00000400790 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
ARID1B-204ENST00000400790 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
ARID1B-204ENST00000400790 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
ARID1B-204ENST00000400790 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
ARID1B-204ENST00000400790 ROCK1Q13464 1354 aa17.22■□□□□ 0.35
ARID1B-204ENST00000400790 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
ARID1B-204ENST00000400790 DNMT1P26358 1616 aaKnown RBP17.21■□□□□ 0.35
ARID1B-204ENST00000400790 MSH5O43196 834 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 282.5 ms