RNA–Protein interactions for RNA: ENST00000400790.3

ARID1B-204, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 3

Gene ARID1B, Length 2,887 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-204ENST00000400790 NISCHQ9Y2I1 1504 aa25.39■■□□□ 1.65
ARID1B-204ENST00000400790 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
ARID1B-204ENST00000400790 SHROOM4Q9ULL8 1493 aa21.57■■□□□ 1.04
ARID1B-204ENST00000400790 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.04
ARID1B-204ENST00000400790 SUPT5HO00267 1087 aaKnown RBP21.25■□□□□ 0.99
ARID1B-204ENST00000400790 DCAF1Q9Y4B6 1507 aa20.92■□□□□ 0.94
ARID1B-204ENST00000400790 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
ARID1B-204ENST00000400790 DCAF8L2P0C7V8 631 aa20.79■□□□□ 0.92
ARID1B-204ENST00000400790 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
ARID1B-204ENST00000400790 PELP1Q8IZL8 1130 aaKnown RBP20.56■□□□□ 0.88
ARID1B-204ENST00000400790 HRCP23327 699 aa20.48■□□□□ 0.87
ARID1B-204ENST00000400790 ABCC9O60706 1549 aa20.36■□□□□ 0.85
ARID1B-204ENST00000400790 PCGF6Q9BYE7 350 aa20.29■□□□□ 0.84
ARID1B-204ENST00000400790 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
ARID1B-204ENST00000400790 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
ARID1B-204ENST00000400790 RSF1Q96T23 1441 aaPredicted RBP20.11■□□□□ 0.81
ARID1B-204ENST00000400790 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
ARID1B-204ENST00000400790 MYT1Q01538 1121 aa19.97■□□□□ 0.79
ARID1B-204ENST00000400790 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
ARID1B-204ENST00000400790 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
ARID1B-204ENST00000400790 NACADO15069 1562 aa19.9■□□□□ 0.78
ARID1B-204ENST00000400790 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
ARID1B-204ENST00000400790 CECR2Q9BXF3 1484 aa19.72■□□□□ 0.75
ARID1B-204ENST00000400790 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
ARID1B-204ENST00000400790 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
ARID1B-204ENST00000400790 WIZO95785 1651 aa19.64■□□□□ 0.74
ARID1B-204ENST00000400790 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
ARID1B-204ENST00000400790 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.73
ARID1B-204ENST00000400790 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
ARID1B-204ENST00000400790 EIF4G1Q04637 1599 aaKnown RBP19.5■□□□□ 0.71
ARID1B-204ENST00000400790 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
ARID1B-204ENST00000400790 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
ARID1B-204ENST00000400790 SMARCA4P51532 1647 aa19.33■□□□□ 0.68
ARID1B-204ENST00000400790 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
ARID1B-204ENST00000400790 SMARCA2P51531 1590 aa19.25■□□□□ 0.67
ARID1B-204ENST00000400790 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
ARID1B-204ENST00000400790 ABCC8Q09428 1581 aa19.21■□□□□ 0.67
ARID1B-204ENST00000400790 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
ARID1B-204ENST00000400790 EEA1Q15075 1411 aa19.09■□□□□ 0.65
ARID1B-204ENST00000400790 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
ARID1B-204ENST00000400790 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
ARID1B-204ENST00000400790 SOGA1O94964 1423 aa19.04■□□□□ 0.64
ARID1B-204ENST00000400790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
ARID1B-204ENST00000400790 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
ARID1B-204ENST00000400790 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
ARID1B-204ENST00000400790 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
ARID1B-204ENST00000400790 BICRAQ9NZM4 1560 aa18.97■□□□□ 0.63
ARID1B-204ENST00000400790 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
ARID1B-204ENST00000400790 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
ARID1B-204ENST00000400790 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
ARID1B-204ENST00000400790 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
ARID1B-204ENST00000400790 KIF21BO75037 1637 aa18.84■□□□□ 0.61
ARID1B-204ENST00000400790 SYNJ1O43426 1573 aa18.81■□□□□ 0.6
ARID1B-204ENST00000400790 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
ARID1B-204ENST00000400790 CEP164Q9UPV0 1460 aa18.81■□□□□ 0.6
ARID1B-204ENST00000400790 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
ARID1B-204ENST00000400790 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
ARID1B-204ENST00000400790 ATAD2BQ9ULI0 1458 aa18.74■□□□□ 0.59
ARID1B-204ENST00000400790 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
ARID1B-204ENST00000400790 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
ARID1B-204ENST00000400790 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
ARID1B-204ENST00000400790 CLIP1P30622 1438 aa18.68■□□□□ 0.58
ARID1B-204ENST00000400790 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
ARID1B-204ENST00000400790 BCL11AQ9H165 835 aa18.64■□□□□ 0.57
ARID1B-204ENST00000400790 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
ARID1B-204ENST00000400790 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
ARID1B-204ENST00000400790 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
ARID1B-204ENST00000400790 RAPGEF2Q9Y4G8 1499 aa18.59■□□□□ 0.57
ARID1B-204ENST00000400790 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.57
ARID1B-204ENST00000400790 APLP2Q06481 763 aa18.51■□□□□ 0.55
ARID1B-204ENST00000400790 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
ARID1B-204ENST00000400790 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
ARID1B-204ENST00000400790 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
ARID1B-204ENST00000400790 PRXQ9BXM0 1461 aa18.44■□□□□ 0.54
ARID1B-204ENST00000400790 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
ARID1B-204ENST00000400790 ARAP1Q96P48 1450 aa18.37■□□□□ 0.53
ARID1B-204ENST00000400790 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
ARID1B-204ENST00000400790 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
ARID1B-204ENST00000400790 CUX1P39880 1505 aa18.35■□□□□ 0.53
ARID1B-204ENST00000400790 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
ARID1B-204ENST00000400790 MIER1Q8N108 512 aa18.32■□□□□ 0.52
ARID1B-204ENST00000400790 KIF27Q86VH2 1401 aa18.3■□□□□ 0.52
ARID1B-204ENST00000400790 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
ARID1B-204ENST00000400790 DHX57Q6P158 1386 aaKnown RBP18.27■□□□□ 0.51
ARID1B-204ENST00000400790 CFTRP13569 1480 aa18.27■□□□□ 0.51
ARID1B-204ENST00000400790 RRBP1Q9P2E9 1410 aaKnown RBP18.26■□□□□ 0.51
ARID1B-204ENST00000400790 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
ARID1B-204ENST00000400790 KANK4Q5T7N3 995 aaPredicted RBP18.22■□□□□ 0.51
ARID1B-204ENST00000400790 CUX2O14529 1486 aa18.21■□□□□ 0.51
ARID1B-204ENST00000400790 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
ARID1B-204ENST00000400790 ANP32EQ9BTT0 268 aa18.15■□□□□ 0.5
ARID1B-204ENST00000400790 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
ARID1B-204ENST00000400790 MAP3K1Q13233 1512 aa18.11■□□□□ 0.49
ARID1B-204ENST00000400790 TIAM1Q13009 1591 aa18.07■□□□□ 0.48
ARID1B-204ENST00000400790 IGF1RP08069 1367 aa18.06■□□□□ 0.48
ARID1B-204ENST00000400790 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
ARID1B-204ENST00000400790 ERICH6Q7L0X2 663 aa17.99■□□□□ 0.47
ARID1B-204ENST00000400790 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
ARID1B-204ENST00000400790 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
ARID1B-204ENST00000400790 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 283.9 ms