RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
PFKL-202ENST00000397961 NESP48681 1621 aa21.23■□□□□ 0.99
PFKL-202ENST00000397961 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
PFKL-202ENST00000397961 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
PFKL-202ENST00000397961 PEG3Q9GZU2 1588 aa21.21■□□□□ 0.99
PFKL-202ENST00000397961 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
PFKL-202ENST00000397961 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
PFKL-202ENST00000397961 FGD5Q6ZNL6 1462 aa21.17■□□□□ 0.98
PFKL-202ENST00000397961 FOXD1Q16676 465 aa21.16■□□□□ 0.98
PFKL-202ENST00000397961 PHLDB1Q86UU1 1377 aa21.15■□□□□ 0.98
PFKL-202ENST00000397961 CFTRP13569 1480 aa21.13■□□□□ 0.97
PFKL-202ENST00000397961 ZNF326Q5BKZ1 582 aaKnown RBP21.12■□□□□ 0.97
PFKL-202ENST00000397961 MTUS2Q5JR59 1369 aa21.1■□□□□ 0.97
PFKL-202ENST00000397961 IRX6P78412 446 aaPredicted RBP21.07■□□□□ 0.96
PFKL-202ENST00000397961 ZNF777Q9ULD5 760 aaPredicted RBP21.07■□□□□ 0.96
PFKL-202ENST00000397961 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
PFKL-202ENST00000397961 FKBP8Q14318 412 aa21.04■□□□□ 0.96
PFKL-202ENST00000397961 SUPT16HQ9Y5B9 1047 aaKnown RBP21■□□□□ 0.95
PFKL-202ENST00000397961 TONSLQ96HA7 1378 aa20.99■□□□□ 0.95
PFKL-202ENST00000397961 SETD5Q9C0A6 1442 aa20.98■□□□□ 0.95
PFKL-202ENST00000397961 ANP32CO43423 234 aa20.96■□□□□ 0.95
PFKL-202ENST00000397961 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
PFKL-202ENST00000397961 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
PFKL-202ENST00000397961 RRBP1Q9P2E9 1410 aaKnown RBP20.91■□□□□ 0.94
PFKL-202ENST00000397961 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
PFKL-202ENST00000397961 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
PFKL-202ENST00000397961 NEFLP07196 543 aa20.88■□□□□ 0.93
PFKL-202ENST00000397961 LRRC9Q6ZRR7 1453 aa20.88■□□□□ 0.93
PFKL-202ENST00000397961 CLSPNQ9HAW4 1339 aa20.87■□□□□ 0.93
PFKL-202ENST00000397961 HNRNPUQ00839 825 aaKnown RBP eCLIP20.85■□□□□ 0.932e-6■■□□□ 13.7
PFKL-202ENST00000397961 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
PFKL-202ENST00000397961 FAM9BQ8IZU0 186 aa20.84■□□□□ 0.93
PFKL-202ENST00000397961 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
PFKL-202ENST00000397961 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.93
PFKL-202ENST00000397961 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
PFKL-202ENST00000397961 WDR97A6NE52 1622 aa20.8■□□□□ 0.92
PFKL-202ENST00000397961 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.926e-7■■■■■ 29
PFKL-202ENST00000397961 TIAM1Q13009 1591 aa20.76■□□□□ 0.91
PFKL-202ENST00000397961 TOPBP1Q92547 1522 aa20.75■□□□□ 0.91
PFKL-202ENST00000397961 PCF11O94913 1555 aaKnown RBP20.74■□□□□ 0.91
PFKL-202ENST00000397961 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
PFKL-202ENST00000397961 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
PFKL-202ENST00000397961 SLC4A1APQ9BWU0 796 aaKnown RBP20.71■□□□□ 0.91
PFKL-202ENST00000397961 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
PFKL-202ENST00000397961 HSPA5P11021 654 aaKnown RBP20.69■□□□□ 0.9
PFKL-202ENST00000397961 MAPKBP1O60336 1514 aa20.69■□□□□ 0.9
PFKL-202ENST00000397961 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
PFKL-202ENST00000397961 PTPRKQ15262 1439 aa20.67■□□□□ 0.9
PFKL-202ENST00000397961 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
PFKL-202ENST00000397961 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
PFKL-202ENST00000397961 FGD6Q6ZV73 1430 aa20.65■□□□□ 0.9
PFKL-202ENST00000397961 CCDC184Q52MB2 194 aa20.63■□□□□ 0.89
PFKL-202ENST00000397961 CCDC18Q5T9S5 1454 aa20.63■□□□□ 0.89
PFKL-202ENST00000397961 MPHOSPH9Q99550 1183 aa20.62■□□□□ 0.89
PFKL-202ENST00000397961 FMN1Q68DA7 1419 aa20.62■□□□□ 0.89
PFKL-202ENST00000397961 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
PFKL-202ENST00000397961 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
PFKL-202ENST00000397961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.891e-7■□□□□ 10.1
PFKL-202ENST00000397961 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
PFKL-202ENST00000397961 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.885e-7■■■■□ 22.5
PFKL-202ENST00000397961 CFDP1Q9UEE9 299 aaPredicted RBP20.57■□□□□ 0.88
PFKL-202ENST00000397961 NCOA2Q15596 1464 aa20.57■□□□□ 0.88
PFKL-202ENST00000397961 CASKIN1Q8WXD9 1431 aa20.56■□□□□ 0.88
PFKL-202ENST00000397961 RGL3Q3MIN7 710 aa20.55■□□□□ 0.88
PFKL-202ENST00000397961 C11orf95C9JLR9 678 aaPredicted RBP20.53■□□□□ 0.88
PFKL-202ENST00000397961 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
PFKL-202ENST00000397961 CDK13Q14004 1512 aaKnown RBP20.52■□□□□ 0.88
PFKL-202ENST00000397961 ABCA10Q8WWZ4 1543 aa20.51■□□□□ 0.87
PFKL-202ENST00000397961 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
PFKL-202ENST00000397961 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
PFKL-202ENST00000397961 WASHC2AQ641Q2 1341 aa20.5■□□□□ 0.87
PFKL-202ENST00000397961 NBPF8Q3BBV2 869 aa20.47■□□□□ 0.87
PFKL-202ENST00000397961 MYOM3Q5VTT5 1437 aa20.47■□□□□ 0.87
PFKL-202ENST00000397961 FYCO1Q9BQS8 1478 aa20.47■□□□□ 0.87
PFKL-202ENST00000397961 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
PFKL-202ENST00000397961 NAIPQ13075 1403 aa20.45■□□□□ 0.86
PFKL-202ENST00000397961 PKD2Q13563 968 aa20.43■□□□□ 0.86
PFKL-202ENST00000397961 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
PFKL-202ENST00000397961 B4GALNT3Q6L9W6 998 aa20.43■□□□□ 0.86
PFKL-202ENST00000397961 HNRNPMP52272 730 aaKnown RBP eCLIP20.41■□□□□ 0.861e-6■■■□□ 15.2
PFKL-202ENST00000397961 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
PFKL-202ENST00000397961 UACAQ9BZF9 1416 aa20.39■□□□□ 0.85
PFKL-202ENST00000397961 HFM1A2PYH4 1435 aa20.34■□□□□ 0.85
PFKL-202ENST00000397961 PLEKHD1A6NEE1 506 aa20.34■□□□□ 0.85
PFKL-202ENST00000397961 TIMELESSQ9UNS1 1208 aa20.34■□□□□ 0.85
PFKL-202ENST00000397961 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
PFKL-202ENST00000397961 PRDM2Q13029 1718 aa20.34■□□□□ 0.85
PFKL-202ENST00000397961 PRG4Q92954 1404 aaPredicted RBP20.34■□□□□ 0.85
PFKL-202ENST00000397961 JPH4Q96JJ6 628 aa20.33■□□□□ 0.85
PFKL-202ENST00000397961 RBM19Q9Y4C8 960 aaKnown RBP20.33■□□□□ 0.84
PFKL-202ENST00000397961 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.84
PFKL-202ENST00000397961 CCER2I3L3R5 266 aa20.32■□□□□ 0.84
PFKL-202ENST00000397961 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
PFKL-202ENST00000397961 TSPY4P0CV99 314 aa20.31■□□□□ 0.84
PFKL-202ENST00000397961 TSPY10P0CW01 314 aa20.31■□□□□ 0.84
PFKL-202ENST00000397961 MAGI3Q5TCQ9 1506 aa20.3■□□□□ 0.84
PFKL-202ENST00000397961 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
PFKL-202ENST00000397961 EFCAB5A4FU69 1503 aa20.27■□□□□ 0.84
PFKL-202ENST00000397961 PRKRIP1Q9H875 184 aaPredicted RBP20.27■□□□□ 0.84
PFKL-202ENST00000397961 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms