RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 GOLGA3Q08378 1498 aa38.61■■■■□ 3.77
TSPAN4-203ENST00000397397 CEP170Q5SW79 1584 aa38.58■■■■□ 3.77
TSPAN4-203ENST00000397397 NUP160Q12769 1436 aa38.57■■■■□ 3.77
TSPAN4-203ENST00000397397 ARHGEF11O15085 1522 aa38.56■■■■□ 3.76
TSPAN4-203ENST00000397397 CLASP1Q7Z460 1538 aa38.55■■■■□ 3.76
TSPAN4-203ENST00000397397 UBTFP17480 764 aaKnown RBP38.47■■■■□ 3.75
TSPAN4-203ENST00000397397 CTTNBP2Q8WZ74 1663 aa38.45■■■■□ 3.75
TSPAN4-203ENST00000397397 KIAA0586Q9BVV6 1533 aa38.41■■■■□ 3.74
TSPAN4-203ENST00000397397 LOC105371045A0A1W2PR82 267 aa38.41■■■■□ 3.74
TSPAN4-203ENST00000397397 IQGAP2Q13576 1575 aa38.34■■■■□ 3.73
TSPAN4-203ENST00000397397 ARAP1Q96P48 1450 aa38.27■■■■□ 3.72
TSPAN4-203ENST00000397397 TNIKQ9UKE5 1360 aa38.26■■■■□ 3.71
TSPAN4-203ENST00000397397 CYB5RLQ6IPT4 315 aa38.22■■■■□ 3.71
TSPAN4-203ENST00000397397 JPH4Q96JJ6 628 aa38.22■■■■□ 3.71
TSPAN4-203ENST00000397397 SHROOM2Q13796 1616 aa38.2■■■■□ 3.71
TSPAN4-203ENST00000397397 RANGAP1P46060 587 aaPredicted RBP38.15■■■■□ 3.7
TSPAN4-203ENST00000397397 UGGT2Q9NYU1 1516 aa38.14■■■■□ 3.7
TSPAN4-203ENST00000397397 PRG4Q92954 1404 aaPredicted RBP38.08■■■■□ 3.69
TSPAN4-203ENST00000397397 ERCC6L2Q5T890 1561 aa38.06■■■■□ 3.68
TSPAN4-203ENST00000397397 CARMIL2Q6F5E8 1435 aa37.99■■■■□ 3.67
TSPAN4-203ENST00000397397 DISP1Q96F81 1524 aa37.99■■■■□ 3.67
TSPAN4-203ENST00000397397 SAMD9Q5K651 1589 aa37.97■■■■□ 3.67
TSPAN4-203ENST00000397397 KIAA0556O60303 1618 aa37.97■■■■□ 3.67
TSPAN4-203ENST00000397397 CEP162Q5TB80 1403 aa37.95■■■■□ 3.67
TSPAN4-203ENST00000397397 EFCAB5A4FU69 1503 aa37.95■■■■□ 3.67
TSPAN4-203ENST00000397397 CLIP1P30622 1438 aa37.94■■■■□ 3.66
TSPAN4-203ENST00000397397 P3H3Q8IVL6 736 aa37.92■■■■□ 3.66
TSPAN4-203ENST00000397397 ARHGAP35Q9NRY4 1499 aa37.89■■■■□ 3.66
TSPAN4-203ENST00000397397 FHOD3Q2V2M9 1422 aa37.81■■■■□ 3.64
TSPAN4-203ENST00000397397 TTBK1Q5TCY1 1321 aaPredicted RBP37.78■■■■□ 3.64
TSPAN4-203ENST00000397397 PTPRGP23470 1445 aa37.73■■■■□ 3.63
TSPAN4-203ENST00000397397 FMN1Q68DA7 1419 aa37.59■■■■□ 3.61
TSPAN4-203ENST00000397397 PLB1Q6P1J6 1458 aa37.51■■■■□ 3.6
TSPAN4-203ENST00000397397 TRHP20396 242 aaPredicted RBP37.51■■■■□ 3.59
TSPAN4-203ENST00000397397 UACAQ9BZF9 1416 aa37.5■■■■□ 3.59
TSPAN4-203ENST00000397397 ABCA8O94911 1581 aa37.48■■■■□ 3.59
TSPAN4-203ENST00000397397 RAPGEF6Q8TEU7 1601 aa37.47■■■■□ 3.59
TSPAN4-203ENST00000397397 VPS8Q8N3P4 1428 aa37.43■■■■□ 3.58
TSPAN4-203ENST00000397397 ABCC2Q92887 1545 aa37.42■■■■□ 3.58
TSPAN4-203ENST00000397397 PCF11O94913 1555 aaKnown RBP37.41■■■■□ 3.58
TSPAN4-203ENST00000397397 ADCY10Q96PN6 1610 aa37.4■■■■□ 3.58
TSPAN4-203ENST00000397397 UHRF1BP1LA0JNW5 1464 aa37.39■■■■□ 3.58
TSPAN4-203ENST00000397397 ATP1B4Q9UN42 357 aaPredicted RBP37.38■■■■□ 3.57
TSPAN4-203ENST00000397397 CASKIN1Q8WXD9 1431 aa37.38■■■■□ 3.57
TSPAN4-203ENST00000397397 HECW1Q76N89 1606 aa37.34■■■■□ 3.57
TSPAN4-203ENST00000397397 FYCO1Q9BQS8 1478 aa37.33■■■■□ 3.57
TSPAN4-203ENST00000397397 NUP153P49790 1475 aaKnown RBP37.31■■■■□ 3.56
TSPAN4-203ENST00000397397 ARID3CA6NKF2 412 aa37.27■■■■□ 3.56
TSPAN4-203ENST00000397397 NPM1P06748 294 aaKnown RBP eCLIP37.21■■■■□ 3.55
TSPAN4-203ENST00000397397 KDM5BQ9UGL1 1544 aa37.21■■■■□ 3.55
TSPAN4-203ENST00000397397 LRRIQ1Q96JM4 1722 aa37.21■■■■□ 3.55
TSPAN4-203ENST00000397397 ATP10BO94823 1461 aa37.19■■■■□ 3.54
TSPAN4-203ENST00000397397 EPRSP07814 1512 aaKnown RBP37.19■■■■□ 3.54
TSPAN4-203ENST00000397397 ZCCHC11Q5TAX3 1644 aaKnown RBP37.19■■■■□ 3.54
TSPAN4-203ENST00000397397 CDK13Q14004 1512 aaKnown RBP37.16■■■■□ 3.54
TSPAN4-203ENST00000397397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.16■■■■□ 3.54
TSPAN4-203ENST00000397397 HNRNPUL2Q1KMD3 747 aaKnown RBP37.16■■■■□ 3.54
TSPAN4-203ENST00000397397 CCDC18Q5T9S5 1454 aa37.15■■■■□ 3.54
TSPAN4-203ENST00000397397 MAPKBP1O60336 1514 aa37.1■■■■□ 3.53
TSPAN4-203ENST00000397397 APLP2Q06481 763 aa37.06■■■■□ 3.52
TSPAN4-203ENST00000397397 KIF13AQ9H1H9 1805 aa37.05■■■■□ 3.52
TSPAN4-203ENST00000397397 CFAP43Q8NDM7 1665 aa37.03■■■■□ 3.52
TSPAN4-203ENST00000397397 TIAM1Q13009 1591 aa37.01■■■■□ 3.52
TSPAN4-203ENST00000397397 ABCC10Q5T3U5 1492 aa36.99■■■■□ 3.51
TSPAN4-203ENST00000397397 CDK11AQ9UQ88 783 aaPredicted RBP36.99■■■■□ 3.51
TSPAN4-203ENST00000397397 MAP3K1Q13233 1512 aa36.98■■■■□ 3.51
TSPAN4-203ENST00000397397 ASXL2Q76L83 1435 aa36.98■■■■□ 3.51
TSPAN4-203ENST00000397397 PLEKHD1A6NEE1 506 aa36.96■■■■□ 3.51
TSPAN4-203ENST00000397397 DIP2BQ9P265 1576 aa36.94■■■■□ 3.5
TSPAN4-203ENST00000397397 FAM69CQ0P6D2 419 aa36.93■■■■□ 3.5
TSPAN4-203ENST00000397397 WDR7Q9Y4E6 1490 aa36.91■■■■□ 3.5
TSPAN4-203ENST00000397397 MAGI3Q5TCQ9 1506 aa36.89■■■■□ 3.5
TSPAN4-203ENST00000397397 MTUS2Q5JR59 1369 aa36.87■■■■□ 3.49
TSPAN4-203ENST00000397397 TROQ12816 1431 aaPredicted RBP36.86■■■■□ 3.49
TSPAN4-203ENST00000397397 LRRC9Q6ZRR7 1453 aa36.84■■■■□ 3.49
TSPAN4-203ENST00000397397 KANK4Q5T7N3 995 aaPredicted RBP36.84■■■■□ 3.49
TSPAN4-203ENST00000397397 KCNH8Q96L42 1107 aa36.83■■■■□ 3.49
TSPAN4-203ENST00000397397 EHBP1L1Q8N3D4 1523 aa36.82■■■■□ 3.48
TSPAN4-203ENST00000397397 KIF14Q15058 1648 aa36.73■■■■□ 3.47
TSPAN4-203ENST00000397397 PPARGC1BQ86YN6 1023 aaKnown RBP36.71■■■■□ 3.47
TSPAN4-203ENST00000397397 SUPT6HQ7KZ85 1726 aaKnown RBP36.68■■■■□ 3.46
TSPAN4-203ENST00000397397 GLI2P10070 1586 aa36.66■■■■□ 3.46
TSPAN4-203ENST00000397397 TSPOAP1O95153 1857 aa36.65■■■■□ 3.46
TSPAN4-203ENST00000397397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.63■■■■□ 3.45
TSPAN4-203ENST00000397397 NCOA2Q15596 1464 aa36.61■■■■□ 3.45
TSPAN4-203ENST00000397397 ABCA9Q8IUA7 1624 aa36.6■■■■□ 3.45
TSPAN4-203ENST00000397397 TTC37Q6PGP7 1564 aa36.6■■■■□ 3.45
TSPAN4-203ENST00000397397 PPRC1Q5VV67 1664 aaKnown RBP36.53■■■■□ 3.44
TSPAN4-203ENST00000397397 CCNB3Q8WWL7 1395 aa36.51■■■■□ 3.44
TSPAN4-203ENST00000397397 MAP3K4Q9Y6R4 1608 aa36.51■■■■□ 3.44
TSPAN4-203ENST00000397397 CD109Q6YHK3 1445 aa36.5■■■■□ 3.43
TSPAN4-203ENST00000397397 MYO5CQ9NQX4 1742 aa36.49■■■■□ 3.43
TSPAN4-203ENST00000397397 CDC42BPAQ5VT25 1732 aa36.47■■■■□ 3.43
TSPAN4-203ENST00000397397 GPATCH8Q9UKJ3 1502 aaKnown RBP36.44■■■■□ 3.42
TSPAN4-203ENST00000397397 PHLDB1Q86UU1 1377 aa36.43■■■■□ 3.42
TSPAN4-203ENST00000397397 PLCH2O75038 1416 aa36.42■■■■□ 3.42
TSPAN4-203ENST00000397397 ITSN2Q9NZM3 1697 aa36.42■■■■□ 3.42
TSPAN4-203ENST00000397397 PREX2Q70Z35 1606 aa36.41■■■■□ 3.42
TSPAN4-203ENST00000397397 KDM6BO15054 1643 aa36.39■■■■□ 3.42
TSPAN4-203ENST00000397397 CDC42BPBQ9Y5S2 1711 aa36.39■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms