RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 KIAA0586Q9BVV6 1533 aa28.26■■■□□ 2.11
HLA-A-204ENST00000396634 GOLGA3Q08378 1498 aa28.26■■■□□ 2.11
HLA-A-204ENST00000396634 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
HLA-A-204ENST00000396634 IQGAP2Q13576 1575 aa28.24■■■□□ 2.11
HLA-A-204ENST00000396634 ERCC6L2Q5T890 1561 aa28.22■■■□□ 2.11
HLA-A-204ENST00000396634 UBTFP17480 764 aaKnown RBP28.21■■■□□ 2.11
HLA-A-204ENST00000396634 SHROOM2Q13796 1616 aa28.2■■■□□ 2.11
HLA-A-204ENST00000396634 RANGAP1P46060 587 aaPredicted RBP28.19■■■□□ 2.1
HLA-A-204ENST00000396634 LOC105371045A0A1W2PR82 267 aa28.19■■■□□ 2.1
HLA-A-204ENST00000396634 JPH4Q96JJ6 628 aa28.17■■■□□ 2.1
HLA-A-204ENST00000396634 ARHGEF11O15085 1522 aa28.16■■■□□ 2.1
HLA-A-204ENST00000396634 RIMBP3CA6NJZ7 1639 aa28.15■■■□□ 2.1
HLA-A-204ENST00000396634 RIMBP3BA6NNM3 1639 aa28.15■■■□□ 2.1
HLA-A-204ENST00000396634 RIMBP3Q9UFD9 1639 aa28.15■■■□□ 2.1
HLA-A-204ENST00000396634 PRG4Q92954 1404 aaPredicted RBP28.12■■■□□ 2.09
HLA-A-204ENST00000396634 UGGT2Q9NYU1 1516 aa28.05■■■□□ 2.08
HLA-A-204ENST00000396634 DISP1Q96F81 1524 aa28.02■■■□□ 2.08
HLA-A-204ENST00000396634 TTBK1Q5TCY1 1321 aaPredicted RBP28.02■■■□□ 2.08
HLA-A-204ENST00000396634 P3H3Q8IVL6 736 aa27.99■■■□□ 2.07
HLA-A-204ENST00000396634 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
HLA-A-204ENST00000396634 KIAA0556O60303 1618 aa27.98■■■□□ 2.07
HLA-A-204ENST00000396634 TNIKQ9UKE5 1360 aa27.95■■■□□ 2.06
HLA-A-204ENST00000396634 SAMD9Q5K651 1589 aa27.93■■■□□ 2.06
HLA-A-204ENST00000396634 CARMIL2Q6F5E8 1435 aa27.92■■■□□ 2.06
HLA-A-204ENST00000396634 CYB5RLQ6IPT4 315 aa27.91■■■□□ 2.06
HLA-A-204ENST00000396634 FHOD3Q2V2M9 1422 aa27.86■■■□□ 2.05
HLA-A-204ENST00000396634 ARHGAP35Q9NRY4 1499 aa27.84■■■□□ 2.05
HLA-A-204ENST00000396634 CEP162Q5TB80 1403 aa27.82■■■□□ 2.04
HLA-A-204ENST00000396634 EFCAB5A4FU69 1503 aa27.81■■■□□ 2.04
HLA-A-204ENST00000396634 PTPRGP23470 1445 aa27.8■■■□□ 2.04
HLA-A-204ENST00000396634 CLIP1P30622 1438 aa27.8■■■□□ 2.04
HLA-A-204ENST00000396634 PLB1Q6P1J6 1458 aa27.71■■■□□ 2.03
HLA-A-204ENST00000396634 ADCY10Q96PN6 1610 aa27.69■■■□□ 2.02
HLA-A-204ENST00000396634 ARID3CA6NKF2 412 aa27.63■■■□□ 2.01
HLA-A-204ENST00000396634 ABCA8O94911 1581 aa27.62■■■□□ 2.01
HLA-A-204ENST00000396634 UACAQ9BZF9 1416 aa27.62■■■□□ 2.01
HLA-A-204ENST00000396634 RAPGEF6Q8TEU7 1601 aa27.59■■■□□ 2.01
HLA-A-204ENST00000396634 ABCC2Q92887 1545 aa27.58■■■□□ 2.01
HLA-A-204ENST00000396634 PCF11O94913 1555 aaKnown RBP27.55■■■□□ 2
HLA-A-204ENST00000396634 FMN1Q68DA7 1419 aa27.54■■■□□ 2
HLA-A-204ENST00000396634 ATP1B4Q9UN42 357 aaPredicted RBP27.53■■■□□ 2
HLA-A-204ENST00000396634 UHRF1BP1LA0JNW5 1464 aa27.51■■□□□ 1.99
HLA-A-204ENST00000396634 NUP153P49790 1475 aaKnown RBP27.5■■□□□ 1.99
HLA-A-204ENST00000396634 LRRIQ1Q96JM4 1722 aa27.49■■□□□ 1.99
HLA-A-204ENST00000396634 ZCCHC11Q5TAX3 1644 aaKnown RBP27.48■■□□□ 1.99
HLA-A-204ENST00000396634 CDK13Q14004 1512 aaKnown RBP27.44■■□□□ 1.98
HLA-A-204ENST00000396634 KDM5BQ9UGL1 1544 aa27.43■■□□□ 1.98
HLA-A-204ENST00000396634 HECW1Q76N89 1606 aa27.43■■□□□ 1.98
HLA-A-204ENST00000396634 CASKIN1Q8WXD9 1431 aa27.4■■□□□ 1.98
HLA-A-204ENST00000396634 ATP10BO94823 1461 aa27.4■■□□□ 1.98
HLA-A-204ENST00000396634 NPM1P06748 294 aaKnown RBP eCLIP27.4■■□□□ 1.98
HLA-A-204ENST00000396634 VPS8Q8N3P4 1428 aa27.39■■□□□ 1.98
HLA-A-204ENST00000396634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.38■■□□□ 1.97
HLA-A-204ENST00000396634 HNRNPUL2Q1KMD3 747 aaKnown RBP27.38■■□□□ 1.97
HLA-A-204ENST00000396634 FYCO1Q9BQS8 1478 aa27.37■■□□□ 1.97
HLA-A-204ENST00000396634 EPRSP07814 1512 aaKnown RBP27.36■■□□□ 1.97
HLA-A-204ENST00000396634 ASXL2Q76L83 1435 aa27.32■■□□□ 1.96
HLA-A-204ENST00000396634 MAPKBP1O60336 1514 aa27.31■■□□□ 1.96
HLA-A-204ENST00000396634 CCDC18Q5T9S5 1454 aa27.22■■□□□ 1.95
HLA-A-204ENST00000396634 WDR7Q9Y4E6 1490 aa27.22■■□□□ 1.95
HLA-A-204ENST00000396634 MAGI3Q5TCQ9 1506 aa27.22■■□□□ 1.95
HLA-A-204ENST00000396634 KCNH8Q96L42 1107 aa27.21■■□□□ 1.95
HLA-A-204ENST00000396634 KIF13AQ9H1H9 1805 aa27.21■■□□□ 1.95
HLA-A-204ENST00000396634 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
HLA-A-204ENST00000396634 CFAP43Q8NDM7 1665 aa27.19■■□□□ 1.94
HLA-A-204ENST00000396634 DIP2BQ9P265 1576 aa27.18■■□□□ 1.94
HLA-A-204ENST00000396634 TIAM1Q13009 1591 aa27.16■■□□□ 1.94
HLA-A-204ENST00000396634 PLEKHD1A6NEE1 506 aa27.14■■□□□ 1.94
HLA-A-204ENST00000396634 ABCC10Q5T3U5 1492 aa27.14■■□□□ 1.93
HLA-A-204ENST00000396634 FAM69CQ0P6D2 419 aa27.13■■□□□ 1.93
HLA-A-204ENST00000396634 KIF14Q15058 1648 aa27.13■■□□□ 1.93
HLA-A-204ENST00000396634 TSPOAP1O95153 1857 aa27.09■■□□□ 1.93
HLA-A-204ENST00000396634 TROQ12816 1431 aaPredicted RBP27.07■■□□□ 1.92
HLA-A-204ENST00000396634 KANK4Q5T7N3 995 aaPredicted RBP27.07■■□□□ 1.92
HLA-A-204ENST00000396634 CDK11AQ9UQ88 783 aaPredicted RBP27.06■■□□□ 1.92
HLA-A-204ENST00000396634 MTUS2Q5JR59 1369 aa27.05■■□□□ 1.92
HLA-A-204ENST00000396634 TTC37Q6PGP7 1564 aa27.05■■□□□ 1.92
HLA-A-204ENST00000396634 PPARGC1BQ86YN6 1023 aaKnown RBP27.04■■□□□ 1.92
HLA-A-204ENST00000396634 APLP2Q06481 763 aa27.03■■□□□ 1.92
HLA-A-204ENST00000396634 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.02■■□□□ 1.92
HLA-A-204ENST00000396634 LRRC9Q6ZRR7 1453 aa27.01■■□□□ 1.91
HLA-A-204ENST00000396634 GLI2P10070 1586 aa27.01■■□□□ 1.91
HLA-A-204ENST00000396634 EHBP1L1Q8N3D4 1523 aa27■■□□□ 1.91
HLA-A-204ENST00000396634 ABCA9Q8IUA7 1624 aa27■■□□□ 1.91
HLA-A-204ENST00000396634 MAP3K4Q9Y6R4 1608 aa27■■□□□ 1.91
HLA-A-204ENST00000396634 MAP3K1Q13233 1512 aa26.98■■□□□ 1.91
HLA-A-204ENST00000396634 PPRC1Q5VV67 1664 aaKnown RBP26.95■■□□□ 1.91
HLA-A-204ENST00000396634 CD109Q6YHK3 1445 aa26.92■■□□□ 1.9
HLA-A-204ENST00000396634 SUPT6HQ7KZ85 1726 aaKnown RBP26.91■■□□□ 1.9
HLA-A-204ENST00000396634 MYO5CQ9NQX4 1742 aa26.89■■□□□ 1.9
HLA-A-204ENST00000396634 NCOA2Q15596 1464 aa26.89■■□□□ 1.89
HLA-A-204ENST00000396634 CDC42BPAQ5VT25 1732 aa26.88■■□□□ 1.89
HLA-A-204ENST00000396634 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
HLA-A-204ENST00000396634 PREX2Q70Z35 1606 aa26.82■■□□□ 1.88
HLA-A-204ENST00000396634 CCNB3Q8WWL7 1395 aa26.8■■□□□ 1.88
HLA-A-204ENST00000396634 GPATCH8Q9UKJ3 1502 aaKnown RBP26.79■■□□□ 1.88
HLA-A-204ENST00000396634 ARHGAP5Q13017 1502 aa26.79■■□□□ 1.88
HLA-A-204ENST00000396634 PLCH2O75038 1416 aa26.78■■□□□ 1.88
HLA-A-204ENST00000396634 FANCAO15360 1455 aa26.76■■□□□ 1.87
HLA-A-204ENST00000396634 PHLDB1Q86UU1 1377 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms