RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 CUL7Q14999 1698 aa28.58■■■□□ 2.16
CLTA-203ENST00000396603 IGF1RP08069 1367 aa28.57■■■□□ 2.16
CLTA-203ENST00000396603 KIAA0586Q9BVV6 1533 aa28.54■■■□□ 2.16
CLTA-203ENST00000396603 MAPKBP1O60336 1514 aa28.41■■■□□ 2.14
CLTA-203ENST00000396603 NPM1P06748 294 aaKnown RBP eCLIP28.38■■■□□ 2.13
CLTA-203ENST00000396603 KIF13AQ9H1H9 1805 aa28.38■■■□□ 2.13
CLTA-203ENST00000396603 CARMIL1Q5VZK9 1371 aa28.37■■■□□ 2.13
CLTA-203ENST00000396603 ABCC10Q5T3U5 1492 aa28.36■■■□□ 2.13
CLTA-203ENST00000396603 ADCY10Q96PN6 1610 aa28.33■■■□□ 2.13
CLTA-203ENST00000396603 CARMIL2Q6F5E8 1435 aa28.26■■■□□ 2.12
CLTA-203ENST00000396603 DIP2BQ9P265 1576 aa28.25■■■□□ 2.11
CLTA-203ENST00000396603 AEBP2Q6ZN18 517 aaPredicted RBP28.25■■■□□ 2.11
CLTA-203ENST00000396603 FAM69CQ0P6D2 419 aa28.24■■■□□ 2.11
CLTA-203ENST00000396603 PTPRGP23470 1445 aa28.24■■■□□ 2.11
CLTA-203ENST00000396603 IQGAP2Q13576 1575 aa28.23■■■□□ 2.11
CLTA-203ENST00000396603 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
CLTA-203ENST00000396603 RAPGEF2Q9Y4G8 1499 aa28.15■■■□□ 2.1
CLTA-203ENST00000396603 ABCC2Q92887 1545 aa28.13■■■□□ 2.09
CLTA-203ENST00000396603 UHRF1BP1LA0JNW5 1464 aa28.12■■■□□ 2.09
CLTA-203ENST00000396603 UGGT2Q9NYU1 1516 aa28.08■■■□□ 2.09
CLTA-203ENST00000396603 DISP1Q96F81 1524 aa28.08■■■□□ 2.08
CLTA-203ENST00000396603 PLB1Q6P1J6 1458 aa28.05■■■□□ 2.08
CLTA-203ENST00000396603 UACAQ9BZF9 1416 aa28.04■■■□□ 2.08
CLTA-203ENST00000396603 GLI2P10070 1586 aa28■■■□□ 2.07
CLTA-203ENST00000396603 KDM6BO15054 1643 aa28■■■□□ 2.07
CLTA-203ENST00000396603 ASXL2Q76L83 1435 aa27.99■■■□□ 2.07
CLTA-203ENST00000396603 KIAA0556O60303 1618 aa27.96■■■□□ 2.07
CLTA-203ENST00000396603 KDM5BQ9UGL1 1544 aa27.96■■■□□ 2.07
CLTA-203ENST00000396603 TTBK1Q5TCY1 1321 aaPredicted RBP27.92■■■□□ 2.06
CLTA-203ENST00000396603 GOLGA3Q08378 1498 aa27.88■■■□□ 2.05
CLTA-203ENST00000396603 CTTNBP2Q8WZ74 1663 aa27.87■■■□□ 2.05
CLTA-203ENST00000396603 TSPOAP1O95153 1857 aa27.87■■■□□ 2.05
CLTA-203ENST00000396603 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
CLTA-203ENST00000396603 EPRSP07814 1512 aaKnown RBP27.84■■■□□ 2.05
CLTA-203ENST00000396603 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
CLTA-203ENST00000396603 PPRC1Q5VV67 1664 aaKnown RBP27.81■■■□□ 2.04
CLTA-203ENST00000396603 MAP3K4Q9Y6R4 1608 aa27.78■■■□□ 2.04
CLTA-203ENST00000396603 TEX14Q8IWB6 1497 aa27.77■■■□□ 2.04
CLTA-203ENST00000396603 WDR7Q9Y4E6 1490 aa27.75■■■□□ 2.03
CLTA-203ENST00000396603 ABCA8O94911 1581 aa27.72■■■□□ 2.03
CLTA-203ENST00000396603 KDM4FA0A1W2PPD8 638 aa27.68■■■□□ 2.02
CLTA-203ENST00000396603 FAM9AQ8IZU1 332 aaPredicted RBP27.64■■■□□ 2.02
CLTA-203ENST00000396603 COL17A1Q9UMD9 1497 aaPredicted RBP27.62■■■□□ 2.01
CLTA-203ENST00000396603 MAGI3Q5TCQ9 1506 aa27.61■■■□□ 2.01
CLTA-203ENST00000396603 EEA1Q15075 1411 aa27.59■■■□□ 2.01
CLTA-203ENST00000396603 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
CLTA-203ENST00000396603 CSRNP3Q8WYN3 585 aa27.58■■■□□ 2.01
CLTA-203ENST00000396603 CD109Q6YHK3 1445 aa27.55■■■□□ 2
CLTA-203ENST00000396603 SAMD9Q5K651 1589 aa27.52■■■□□ 2
CLTA-203ENST00000396603 ADGRL1O94910 1474 aa27.49■■□□□ 1.99
CLTA-203ENST00000396603 ATP10BO94823 1461 aa27.46■■□□□ 1.99
CLTA-203ENST00000396603 KCNH8Q96L42 1107 aa27.45■■□□□ 1.98
CLTA-203ENST00000396603 PHLDB1Q86UU1 1377 aa27.41■■□□□ 1.98
CLTA-203ENST00000396603 RAPGEF6Q8TEU7 1601 aa27.39■■□□□ 1.98
CLTA-203ENST00000396603 ARAP3Q8WWN8 1544 aa27.39■■□□□ 1.98
CLTA-203ENST00000396603 ABCA9Q8IUA7 1624 aa27.38■■□□□ 1.97
CLTA-203ENST00000396603 P3H3Q8IVL6 736 aa27.37■■□□□ 1.97
CLTA-203ENST00000396603 NUP153P49790 1475 aaKnown RBP27.3■■□□□ 1.96
CLTA-203ENST00000396603 KIF21BO75037 1637 aa27.3■■□□□ 1.96
CLTA-203ENST00000396603 NEO1Q92859 1461 aa27.29■■□□□ 1.96
CLTA-203ENST00000396603 EFCAB5A4FU69 1503 aa27.29■■□□□ 1.96
CLTA-203ENST00000396603 ARID3CA6NKF2 412 aa27.25■■□□□ 1.95
CLTA-203ENST00000396603 FHOD3Q2V2M9 1422 aa27.24■■□□□ 1.95
CLTA-203ENST00000396603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.2■■□□□ 1.94
CLTA-203ENST00000396603 HNRNPUL2Q1KMD3 747 aaKnown RBP27.2■■□□□ 1.94
CLTA-203ENST00000396603 PLEKHD1A6NEE1 506 aa27.16■■□□□ 1.94
CLTA-203ENST00000396603 HECW2Q9P2P5 1572 aa27.11■■□□□ 1.93
CLTA-203ENST00000396603 CFAP74Q9C0B2 1584 aa27.09■■□□□ 1.93
CLTA-203ENST00000396603 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
CLTA-203ENST00000396603 FRMPD1Q5SYB0 1578 aa27.07■■□□□ 1.92
CLTA-203ENST00000396603 RAPGEF3O95398 923 aa27.06■■□□□ 1.92
CLTA-203ENST00000396603 FMN1Q68DA7 1419 aa27.05■■□□□ 1.92
CLTA-203ENST00000396603 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.05■■□□□ 1.924e-8■■□□□ 13.7
CLTA-203ENST00000396603 FANCAO15360 1455 aa27.03■■□□□ 1.92
CLTA-203ENST00000396603 DENND4BO75064 1496 aaPredicted RBP27.03■■□□□ 1.92
CLTA-203ENST00000396603 ADAMTSL3P82987 1691 aa27.02■■□□□ 1.92
CLTA-203ENST00000396603 AKNAQ7Z591 1439 aa27.01■■□□□ 1.91
CLTA-203ENST00000396603 ARHGEF40Q8TER5 1519 aa26.99■■□□□ 1.91
CLTA-203ENST00000396603 RICTORQ6R327 1708 aa26.97■■□□□ 1.91
CLTA-203ENST00000396603 UBTFP17480 764 aaKnown RBP26.97■■□□□ 1.91
CLTA-203ENST00000396603 HECW1Q76N89 1606 aa26.97■■□□□ 1.91
CLTA-203ENST00000396603 TTC37Q6PGP7 1564 aa26.97■■□□□ 1.91
CLTA-203ENST00000396603 ZMYM4Q5VZL5 1548 aa26.96■■□□□ 1.91
CLTA-203ENST00000396603 PTPRMP28827 1452 aa26.96■■□□□ 1.91
CLTA-203ENST00000396603 ARHGAP35Q9NRY4 1499 aa26.95■■□□□ 1.91
CLTA-203ENST00000396603 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
CLTA-203ENST00000396603 CDK13Q14004 1512 aaKnown RBP26.95■■□□□ 1.9
CLTA-203ENST00000396603 BCORL1Q5H9F3 1711 aa26.94■■□□□ 1.9
CLTA-203ENST00000396603 MAGI2Q86UL8 1455 aa26.93■■□□□ 1.9
CLTA-203ENST00000396603 PLCH2O75038 1416 aa26.92■■□□□ 1.9
CLTA-203ENST00000396603 CDK11AQ9UQ88 783 aaPredicted RBP26.92■■□□□ 1.9
CLTA-203ENST00000396603 ARID4BQ4LE39 1312 aaPredicted RBP26.87■■□□□ 1.89
CLTA-203ENST00000396603 POGZQ7Z3K3 1410 aa26.86■■□□□ 1.89
CLTA-203ENST00000396603 MADDQ8WXG6 1647 aa26.85■■□□□ 1.89
CLTA-203ENST00000396603 ZFYVE16Q7Z3T8 1539 aa26.85■■□□□ 1.89
CLTA-203ENST00000396603 ILDR1Q86SU0 546 aaPredicted RBP26.84■■□□□ 1.89
CLTA-203ENST00000396603 TROQ12816 1431 aaPredicted RBP26.81■■□□□ 1.88
CLTA-203ENST00000396603 SCAPERQ9BY12 1400 aa26.81■■□□□ 1.88
CLTA-203ENST00000396603 KIF14Q15058 1648 aa26.8■■□□□ 1.88
CLTA-203ENST00000396603 EFCAB2Q5VUJ9 269 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms