RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RUSC2Q8N2Y8 1516 aa30.82■■■□□ 2.52
EXOSC3-202ENST00000396521 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
EXOSC3-202ENST00000396521 IGF1RP08069 1367 aa30.79■■■□□ 2.52
EXOSC3-202ENST00000396521 KIAA0586Q9BVV6 1533 aa30.78■■■□□ 2.52
EXOSC3-202ENST00000396521 FAM69CQ0P6D2 419 aa30.76■■■□□ 2.51
EXOSC3-202ENST00000396521 ABCC10Q5T3U5 1492 aa30.76■■■□□ 2.51
EXOSC3-202ENST00000396521 MAPKBP1O60336 1514 aa30.73■■■□□ 2.51
EXOSC3-202ENST00000396521 KIF13AQ9H1H9 1805 aa30.7■■■□□ 2.5
EXOSC3-202ENST00000396521 CUL7Q14999 1698 aa30.65■■■□□ 2.5
EXOSC3-202ENST00000396521 ADCY10Q96PN6 1610 aa30.58■■■□□ 2.49
EXOSC3-202ENST00000396521 CARMIL1Q5VZK9 1371 aa30.58■■■□□ 2.49
EXOSC3-202ENST00000396521 PTPRGP23470 1445 aa30.56■■■□□ 2.48
EXOSC3-202ENST00000396521 DIP2BQ9P265 1576 aa30.55■■■□□ 2.48
EXOSC3-202ENST00000396521 CARMIL2Q6F5E8 1435 aa30.55■■■□□ 2.48
EXOSC3-202ENST00000396521 TNIKQ9UKE5 1360 aa30.5■■■□□ 2.47
EXOSC3-202ENST00000396521 ABCC2Q92887 1545 aa30.4■■■□□ 2.46
EXOSC3-202ENST00000396521 PLB1Q6P1J6 1458 aa30.38■■■□□ 2.45
EXOSC3-202ENST00000396521 KDM6BO15054 1643 aa30.37■■■□□ 2.45
EXOSC3-202ENST00000396521 UHRF1BP1LA0JNW5 1464 aa30.35■■■□□ 2.45
EXOSC3-202ENST00000396521 IQGAP2Q13576 1575 aa30.35■■■□□ 2.45
EXOSC3-202ENST00000396521 TTBK1Q5TCY1 1321 aaPredicted RBP30.34■■■□□ 2.45
EXOSC3-202ENST00000396521 UACAQ9BZF9 1416 aa30.3■■■□□ 2.44
EXOSC3-202ENST00000396521 ASXL2Q76L83 1435 aa30.3■■■□□ 2.44
EXOSC3-202ENST00000396521 GLI2P10070 1586 aa30.26■■■□□ 2.43
EXOSC3-202ENST00000396521 RAPGEF2Q9Y4G8 1499 aa30.25■■■□□ 2.43
EXOSC3-202ENST00000396521 KDM4FA0A1W2PPD8 638 aa30.25■■■□□ 2.43
EXOSC3-202ENST00000396521 DISP1Q96F81 1524 aa30.23■■■□□ 2.43
EXOSC3-202ENST00000396521 TSPOAP1O95153 1857 aa30.21■■■□□ 2.43
EXOSC3-202ENST00000396521 UGGT2Q9NYU1 1516 aa30.21■■■□□ 2.43
EXOSC3-202ENST00000396521 KDM5BQ9UGL1 1544 aa30.18■■■□□ 2.42
EXOSC3-202ENST00000396521 EPRSP07814 1512 aaKnown RBP30.11■■■□□ 2.41
EXOSC3-202ENST00000396521 TEX14Q8IWB6 1497 aa30.09■■■□□ 2.41
EXOSC3-202ENST00000396521 KIAA0556O60303 1618 aa30.04■■■□□ 2.4
EXOSC3-202ENST00000396521 PPRC1Q5VV67 1664 aaKnown RBP30.03■■■□□ 2.4
EXOSC3-202ENST00000396521 GOLGA3Q08378 1498 aa30.02■■■□□ 2.4
EXOSC3-202ENST00000396521 MAP3K4Q9Y6R4 1608 aa29.99■■■□□ 2.39
EXOSC3-202ENST00000396521 WDR7Q9Y4E6 1490 aa29.98■■■□□ 2.39
EXOSC3-202ENST00000396521 ZCCHC11Q5TAX3 1644 aaKnown RBP29.97■■■□□ 2.39
EXOSC3-202ENST00000396521 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
EXOSC3-202ENST00000396521 COL17A1Q9UMD9 1497 aaPredicted RBP29.95■■■□□ 2.39
EXOSC3-202ENST00000396521 ADGRL1O94910 1474 aa29.91■■■□□ 2.38
EXOSC3-202ENST00000396521 PRXQ9BXM0 1461 aa29.87■■■□□ 2.37
EXOSC3-202ENST00000396521 CD109Q6YHK3 1445 aa29.86■■■□□ 2.37
EXOSC3-202ENST00000396521 MAGI3Q5TCQ9 1506 aa29.85■■■□□ 2.37
EXOSC3-202ENST00000396521 CTTNBP2Q8WZ74 1663 aa29.83■■■□□ 2.37
EXOSC3-202ENST00000396521 ABCA8O94911 1581 aa29.82■■■□□ 2.36
EXOSC3-202ENST00000396521 KCNH8Q96L42 1107 aa29.81■■■□□ 2.36
EXOSC3-202ENST00000396521 CFAP43Q8NDM7 1665 aa29.75■■■□□ 2.35
EXOSC3-202ENST00000396521 PHLDB1Q86UU1 1377 aa29.69■■■□□ 2.34
EXOSC3-202ENST00000396521 ARAP3Q8WWN8 1544 aa29.63■■■□□ 2.33
EXOSC3-202ENST00000396521 CSRNP3Q8WYN3 585 aa29.63■■■□□ 2.33
EXOSC3-202ENST00000396521 ATP10BO94823 1461 aa29.62■■■□□ 2.33
EXOSC3-202ENST00000396521 ILDR1Q86SU0 546 aaPredicted RBP29.6■■■□□ 2.33
EXOSC3-202ENST00000396521 P3H3Q8IVL6 736 aa29.59■■■□□ 2.33
EXOSC3-202ENST00000396521 HECW2Q9P2P5 1572 aa29.53■■■□□ 2.32
EXOSC3-202ENST00000396521 ARID3CA6NKF2 412 aa29.52■■■□□ 2.32
EXOSC3-202ENST00000396521 EEA1Q15075 1411 aa29.5■■■□□ 2.31
EXOSC3-202ENST00000396521 ABCA9Q8IUA7 1624 aa29.48■■■□□ 2.31
EXOSC3-202ENST00000396521 NEO1Q92859 1461 aa29.48■■■□□ 2.31
EXOSC3-202ENST00000396521 SAMD9Q5K651 1589 aa29.47■■■□□ 2.31
EXOSC3-202ENST00000396521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.47■■■□□ 2.31
EXOSC3-202ENST00000396521 HNRNPUL2Q1KMD3 747 aaKnown RBP29.47■■■□□ 2.31
EXOSC3-202ENST00000396521 RAPGEF6Q8TEU7 1601 aa29.42■■■□□ 2.3
EXOSC3-202ENST00000396521 PLEKHD1A6NEE1 506 aa29.39■■■□□ 2.3
EXOSC3-202ENST00000396521 RAPGEF3O95398 923 aa29.39■■■□□ 2.3
EXOSC3-202ENST00000396521 KIF21BO75037 1637 aa29.37■■■□□ 2.29
EXOSC3-202ENST00000396521 NUP153P49790 1475 aaKnown RBP29.36■■■□□ 2.29
EXOSC3-202ENST00000396521 PTPRMP28827 1452 aa29.29■■■□□ 2.28
EXOSC3-202ENST00000396521 FHOD3Q2V2M9 1422 aa29.28■■■□□ 2.28
EXOSC3-202ENST00000396521 ARID4BQ4LE39 1312 aaPredicted RBP29.27■■■□□ 2.28
EXOSC3-202ENST00000396521 RANGAP1P46060 587 aaPredicted RBP29.25■■■□□ 2.27
EXOSC3-202ENST00000396521 ADAMTSL3P82987 1691 aa29.25■■■□□ 2.27
EXOSC3-202ENST00000396521 DENND4BO75064 1496 aaPredicted RBP29.24■■■□□ 2.27
EXOSC3-202ENST00000396521 EFCAB5A4FU69 1503 aa29.23■■■□□ 2.27
EXOSC3-202ENST00000396521 AKNAQ7Z591 1439 aa29.21■■■□□ 2.27
EXOSC3-202ENST00000396521 FANCAO15360 1455 aa29.18■■■□□ 2.26
EXOSC3-202ENST00000396521 FRMPD1Q5SYB0 1578 aa29.18■■■□□ 2.26
EXOSC3-202ENST00000396521 CFAP74Q9C0B2 1584 aa29.16■■■□□ 2.26
EXOSC3-202ENST00000396521 POGZQ7Z3K3 1410 aa29.14■■■□□ 2.26
EXOSC3-202ENST00000396521 FBXO41Q8TF61 875 aa29.14■■■□□ 2.26
EXOSC3-202ENST00000396521 BCORL1Q5H9F3 1711 aa29.14■■■□□ 2.25
EXOSC3-202ENST00000396521 MAGI2Q86UL8 1455 aa29.11■■■□□ 2.25
EXOSC3-202ENST00000396521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.11■■■□□ 2.25
EXOSC3-202ENST00000396521 ARHGEF40Q8TER5 1519 aa29.11■■■□□ 2.25
EXOSC3-202ENST00000396521 CDK11AQ9UQ88 783 aaPredicted RBP29.07■■■□□ 2.24
EXOSC3-202ENST00000396521 ZMYM4Q5VZL5 1548 aa29.06■■■□□ 2.24
EXOSC3-202ENST00000396521 RICTORQ6R327 1708 aa29.06■■■□□ 2.24
EXOSC3-202ENST00000396521 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
EXOSC3-202ENST00000396521 PCF11O94913 1555 aaKnown RBP29.05■■■□□ 2.24
EXOSC3-202ENST00000396521 PLCH2O75038 1416 aa29.04■■■□□ 2.24
EXOSC3-202ENST00000396521 FMN1Q68DA7 1419 aa29.04■■■□□ 2.24
EXOSC3-202ENST00000396521 UBTFP17480 764 aaKnown RBP29.01■■■□□ 2.23
EXOSC3-202ENST00000396521 EFCAB2Q5VUJ9 269 aa29.01■■■□□ 2.23
EXOSC3-202ENST00000396521 LMTK3Q96Q04 1460 aa29.01■■■□□ 2.23
EXOSC3-202ENST00000396521 ZFYVE16Q7Z3T8 1539 aa29■■■□□ 2.23
EXOSC3-202ENST00000396521 TTC37Q6PGP7 1564 aa29■■■□□ 2.23
EXOSC3-202ENST00000396521 SCAPERQ9BY12 1400 aa28.99■■■□□ 2.23
EXOSC3-202ENST00000396521 YEATS2Q9ULM3 1422 aa28.96■■■□□ 2.23
EXOSC3-202ENST00000396521 CDK13Q14004 1512 aaKnown RBP28.96■■■□□ 2.23
EXOSC3-202ENST00000396521 ATP1B4Q9UN42 357 aaPredicted RBP28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 687.3 ms