RNA–Protein interactions for RNA: ENST00000396183.7

CTNNB1-202, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-202ENST00000396183 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
CTNNB1-202ENST00000396183 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
CTNNB1-202ENST00000396183 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
CTNNB1-202ENST00000396183 CENPBP07199 599 aaPredicted RBP20.27■□□□□ 0.84
CTNNB1-202ENST00000396183 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.835e-8■■■■■ 34.8
CTNNB1-202ENST00000396183 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
CTNNB1-202ENST00000396183 RRP7BPQ9NSQ0 103 aa20.25■□□□□ 0.83
CTNNB1-202ENST00000396183 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
CTNNB1-202ENST00000396183 CNGB1Q14028 1251 aaPredicted RBP20.22■□□□□ 0.83
CTNNB1-202ENST00000396183 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
CTNNB1-202ENST00000396183 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
CTNNB1-202ENST00000396183 PHLDB1Q86UU1 1377 aa20.21■□□□□ 0.83
CTNNB1-202ENST00000396183 CHMP7Q8WUX9 453 aaPredicted RBP20.2■□□□□ 0.82
CTNNB1-202ENST00000396183 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
CTNNB1-202ENST00000396183 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
CTNNB1-202ENST00000396183 DHX57Q6P158 1386 aaKnown RBP20.17■□□□□ 0.82
CTNNB1-202ENST00000396183 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
CTNNB1-202ENST00000396183 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
CTNNB1-202ENST00000396183 ERCC6Q03468 1493 aa20.14■□□□□ 0.82
CTNNB1-202ENST00000396183 FHAD1B1AJZ9 1412 aa20.11■□□□□ 0.81
CTNNB1-202ENST00000396183 DDX10Q13206 875 aaKnown RBP20.09■□□□□ 0.81
CTNNB1-202ENST00000396183 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
CTNNB1-202ENST00000396183 FOXD1Q16676 465 aa20.07■□□□□ 0.8
CTNNB1-202ENST00000396183 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
CTNNB1-202ENST00000396183 LRRC9Q6ZRR7 1453 aa20.03■□□□□ 0.8
CTNNB1-202ENST00000396183 POLR3GLQ9BT43 218 aa20.01■□□□□ 0.79
CTNNB1-202ENST00000396183 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
CTNNB1-202ENST00000396183 SETD5Q9C0A6 1442 aa19.98■□□□□ 0.79
CTNNB1-202ENST00000396183 ZNF608Q9ULD9 1512 aaPredicted RBP19.98■□□□□ 0.79
CTNNB1-202ENST00000396183 RRBP1Q9P2E9 1410 aaKnown RBP19.96■□□□□ 0.79
CTNNB1-202ENST00000396183 KCNH8Q96L42 1107 aa19.95■□□□□ 0.78
CTNNB1-202ENST00000396183 ZNF644Q9H582 1327 aaPredicted RBP19.94■□□□□ 0.78
CTNNB1-202ENST00000396183 FMN1Q68DA7 1419 aa19.94■□□□□ 0.78
CTNNB1-202ENST00000396183 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
CTNNB1-202ENST00000396183 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
CTNNB1-202ENST00000396183 TIAM1Q13009 1591 aa19.92■□□□□ 0.78
CTNNB1-202ENST00000396183 TONSLQ96HA7 1378 aa19.89■□□□□ 0.77
CTNNB1-202ENST00000396183 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
CTNNB1-202ENST00000396183 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
CTNNB1-202ENST00000396183 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
CTNNB1-202ENST00000396183 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
CTNNB1-202ENST00000396183 CFDP1Q9UEE9 299 aaPredicted RBP19.82■□□□□ 0.76
CTNNB1-202ENST00000396183 MRC2Q9UBG0 1479 aa19.8■□□□□ 0.76
CTNNB1-202ENST00000396183 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
CTNNB1-202ENST00000396183 FGD6Q6ZV73 1430 aa19.8■□□□□ 0.76
CTNNB1-202ENST00000396183 CLSPNQ9HAW4 1339 aa19.8■□□□□ 0.76
CTNNB1-202ENST00000396183 SENP3-EIF4A1A0A087X0R7 540 aa19.78■□□□□ 0.76
CTNNB1-202ENST00000396183 BCANQ96GW7 911 aa19.78■□□□□ 0.76
CTNNB1-202ENST00000396183 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
CTNNB1-202ENST00000396183 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
CTNNB1-202ENST00000396183 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
CTNNB1-202ENST00000396183 NCOA2Q15596 1464 aa19.77■□□□□ 0.76
CTNNB1-202ENST00000396183 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
CTNNB1-202ENST00000396183 FYCO1Q9BQS8 1478 aa19.75■□□□□ 0.75
CTNNB1-202ENST00000396183 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
CTNNB1-202ENST00000396183 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
CTNNB1-202ENST00000396183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.751e-7■■■■□ 25.3
CTNNB1-202ENST00000396183 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
CTNNB1-202ENST00000396183 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
CTNNB1-202ENST00000396183 KDM2AQ9Y2K7 1162 aa19.7■□□□□ 0.74
CTNNB1-202ENST00000396183 MYOM3Q5VTT5 1437 aa19.68■□□□□ 0.74
CTNNB1-202ENST00000396183 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
CTNNB1-202ENST00000396183 CUL7Q14999 1698 aa19.67■□□□□ 0.74
CTNNB1-202ENST00000396183 ANP32CO43423 234 aa19.67■□□□□ 0.74
CTNNB1-202ENST00000396183 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
CTNNB1-202ENST00000396183 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
CTNNB1-202ENST00000396183 HNRNPMP52272 730 aaKnown RBP eCLIP19.65■□□□□ 0.748e-8■■■□□ 18.5
CTNNB1-202ENST00000396183 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
CTNNB1-202ENST00000396183 L3MBTL2Q969R5 705 aa19.61■□□□□ 0.73
CTNNB1-202ENST00000396183 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
CTNNB1-202ENST00000396183 PLB1Q6P1J6 1458 aa19.61■□□□□ 0.73
CTNNB1-202ENST00000396183 WDR97A6NE52 1622 aa19.6■□□□□ 0.73
CTNNB1-202ENST00000396183 ABCA5Q8WWZ7 1642 aa19.6■□□□□ 0.73
CTNNB1-202ENST00000396183 MAPKBP1O60336 1514 aa19.6■□□□□ 0.73
CTNNB1-202ENST00000396183 TSPY4P0CV99 314 aa19.59■□□□□ 0.73
CTNNB1-202ENST00000396183 TSPY10P0CW01 314 aa19.59■□□□□ 0.73
CTNNB1-202ENST00000396183 IQGAP2Q13576 1575 aa19.59■□□□□ 0.73
CTNNB1-202ENST00000396183 RGL3Q3MIN7 710 aa19.59■□□□□ 0.73
CTNNB1-202ENST00000396183 EPRSP07814 1512 aaKnown RBP19.58■□□□□ 0.73
CTNNB1-202ENST00000396183 TARBP1Q13395 1621 aaKnown RBP19.57■□□□□ 0.72
CTNNB1-202ENST00000396183 CTTNBP2Q8WZ74 1663 aa19.57■□□□□ 0.72
CTNNB1-202ENST00000396183 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
CTNNB1-202ENST00000396183 NAIPQ13075 1403 aa19.55■□□□□ 0.72
CTNNB1-202ENST00000396183 MAGI3Q5TCQ9 1506 aa19.54■□□□□ 0.72
CTNNB1-202ENST00000396183 PKD2Q13563 968 aa19.54■□□□□ 0.72
CTNNB1-202ENST00000396183 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
CTNNB1-202ENST00000396183 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
CTNNB1-202ENST00000396183 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
CTNNB1-202ENST00000396183 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
CTNNB1-202ENST00000396183 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
CTNNB1-202ENST00000396183 FAM9BQ8IZU0 186 aa19.5■□□□□ 0.71
CTNNB1-202ENST00000396183 EIF4G2P78344 907 aaKnown RBP eCLIP19.5■□□□□ 0.71
CTNNB1-202ENST00000396183 KIAA0586Q9BVV6 1533 aa19.49■□□□□ 0.71
CTNNB1-202ENST00000396183 IRX6P78412 446 aaPredicted RBP19.48■□□□□ 0.71
CTNNB1-202ENST00000396183 HFM1A2PYH4 1435 aa19.47■□□□□ 0.71
CTNNB1-202ENST00000396183 HNRNPUQ00839 825 aaKnown RBP eCLIP19.47■□□□□ 0.71
CTNNB1-202ENST00000396183 UACAQ9BZF9 1416 aa19.46■□□□□ 0.71
CTNNB1-202ENST00000396183 ADAMTS12P58397 1594 aa19.45■□□□□ 0.7
CTNNB1-202ENST00000396183 PTPRGP23470 1445 aa19.45■□□□□ 0.7
CTNNB1-202ENST00000396183 CFAP43Q8NDM7 1665 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms