RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.852e-8■■■■■ 33.6
SREBF1-204ENST00000395756 CCNB3Q8WWL7 1395 aa26.57■■□□□ 1.84
SREBF1-204ENST00000395756 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
SREBF1-204ENST00000395756 ARID3CA6NKF2 412 aa26.52■■□□□ 1.84
SREBF1-204ENST00000395756 DIEXFQ68CQ4 756 aaKnown RBP26.51■■□□□ 1.83
SREBF1-204ENST00000395756 RRBP1Q9P2E9 1410 aaKnown RBP26.47■■□□□ 1.83
SREBF1-204ENST00000395756 PHLDB1Q86UU1 1377 aa26.47■■□□□ 1.83
SREBF1-204ENST00000395756 CUL7Q14999 1698 aa26.45■■□□□ 1.83
SREBF1-204ENST00000395756 LRRC9Q6ZRR7 1453 aa26.45■■□□□ 1.82
SREBF1-204ENST00000395756 TIAM1Q13009 1591 aa26.45■■□□□ 1.82
SREBF1-204ENST00000395756 MRC2Q9UBG0 1479 aa26.44■■□□□ 1.82
SREBF1-204ENST00000395756 ABCA5Q8WWZ7 1642 aa26.42■■□□□ 1.82
SREBF1-204ENST00000395756 PCF11O94913 1555 aaKnown RBP26.42■■□□□ 1.82
SREBF1-204ENST00000395756 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
SREBF1-204ENST00000395756 ZNF316A6NFI3 1004 aaPredicted RBP26.4■■□□□ 1.82
SREBF1-204ENST00000395756 FBLN2P98095 1184 aa26.4■■□□□ 1.82
SREBF1-204ENST00000395756 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
SREBF1-204ENST00000395756 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.82
SREBF1-204ENST00000395756 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.81
SREBF1-204ENST00000395756 DHX57Q6P158 1386 aaKnown RBP26.38■■□□□ 1.81
SREBF1-204ENST00000395756 TARBP1Q13395 1621 aaKnown RBP26.37■■□□□ 1.81
SREBF1-204ENST00000395756 FMN1Q68DA7 1419 aa26.33■■□□□ 1.81
SREBF1-204ENST00000395756 CASKIN1Q8WXD9 1431 aa26.33■■□□□ 1.81
SREBF1-204ENST00000395756 MTUS2Q5JR59 1369 aa26.32■■□□□ 1.8
SREBF1-204ENST00000395756 EFCAB5A4FU69 1503 aa26.3■■□□□ 1.8
SREBF1-204ENST00000395756 CTTNBP2Q8WZ74 1663 aa26.29■■□□□ 1.8
SREBF1-204ENST00000395756 RAB3GAP2Q9H2M9 1393 aa26.28■■□□□ 1.8
SREBF1-204ENST00000395756 FYCO1Q9BQS8 1478 aa26.27■■□□□ 1.8
SREBF1-204ENST00000395756 MAP3K1Q13233 1512 aa26.26■■□□□ 1.79
SREBF1-204ENST00000395756 GRIN2BQ13224 1484 aa26.24■■□□□ 1.79
SREBF1-204ENST00000395756 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
SREBF1-204ENST00000395756 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
SREBF1-204ENST00000395756 NEUROD1Q13562 356 aa26.19■■□□□ 1.78
SREBF1-204ENST00000395756 SNAPC4Q5SXM2 1469 aa26.18■■□□□ 1.78
SREBF1-204ENST00000395756 SETD5Q9C0A6 1442 aa26.14■■□□□ 1.78
SREBF1-204ENST00000395756 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
SREBF1-204ENST00000395756 SIN3AQ96ST3 1273 aa26.12■■□□□ 1.77
SREBF1-204ENST00000395756 WDR62O43379 1518 aa26.12■■□□□ 1.77
SREBF1-204ENST00000395756 CLSPNQ9HAW4 1339 aa26.11■■□□□ 1.77
SREBF1-204ENST00000395756 CFAP43Q8NDM7 1665 aa26.11■■□□□ 1.77
SREBF1-204ENST00000395756 CHIC2Q9UKJ5 165 aa26.1■■□□□ 1.77
SREBF1-204ENST00000395756 SAMD9Q5K651 1589 aa26.1■■□□□ 1.77
SREBF1-204ENST00000395756 ADAMTS12P58397 1594 aa26.09■■□□□ 1.77
SREBF1-204ENST00000395756 YTHDC1Q96MU7 727 aaKnown RBP26.07■■□□□ 1.76
SREBF1-204ENST00000395756 IQGAP2Q13576 1575 aa26.06■■□□□ 1.76
SREBF1-204ENST00000395756 FGD6Q6ZV73 1430 aa26.06■■□□□ 1.76
SREBF1-204ENST00000395756 MIER1Q8N108 512 aa26.04■■□□□ 1.76
SREBF1-204ENST00000395756 NCOA2Q15596 1464 aa26.03■■□□□ 1.76
SREBF1-204ENST00000395756 RRP7BPQ9NSQ0 103 aa26.01■■□□□ 1.75
SREBF1-204ENST00000395756 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
SREBF1-204ENST00000395756 CDK13Q14004 1512 aaKnown RBP25.98■■□□□ 1.75
SREBF1-204ENST00000395756 PTPRKQ15262 1439 aa25.96■■□□□ 1.75
SREBF1-204ENST00000395756 GRIN2AQ12879 1464 aa25.96■■□□□ 1.75
SREBF1-204ENST00000395756 MAGI3Q5TCQ9 1506 aa25.94■■□□□ 1.74
SREBF1-204ENST00000395756 LRRIQ1Q96JM4 1722 aa25.94■■□□□ 1.74
SREBF1-204ENST00000395756 KIAA0586Q9BVV6 1533 aa25.94■■□□□ 1.74
SREBF1-204ENST00000395756 MYOM3Q5VTT5 1437 aa25.93■■□□□ 1.74
SREBF1-204ENST00000395756 JPH4Q96JJ6 628 aa25.93■■□□□ 1.74
SREBF1-204ENST00000395756 EPRSP07814 1512 aaKnown RBP25.92■■□□□ 1.74
SREBF1-204ENST00000395756 MAPKBP1O60336 1514 aa25.89■■□□□ 1.73
SREBF1-204ENST00000395756 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
SREBF1-204ENST00000395756 DISP1Q96F81 1524 aa25.86■■□□□ 1.73
SREBF1-204ENST00000395756 TRIM52Q96A61 297 aa25.86■■□□□ 1.73
SREBF1-204ENST00000395756 HIRIP3Q9BW71 556 aaPredicted RBP25.85■■□□□ 1.73
SREBF1-204ENST00000395756 ZNF644Q9H582 1327 aaPredicted RBP25.84■■□□□ 1.73
SREBF1-204ENST00000395756 CCDC18Q5T9S5 1454 aa25.84■■□□□ 1.73
SREBF1-204ENST00000395756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.84■■□□□ 1.733e-17■■■■■ 32.6
SREBF1-204ENST00000395756 UGGT2Q9NYU1 1516 aa25.84■■□□□ 1.73
SREBF1-204ENST00000395756 EHBP1L1Q8N3D4 1523 aa25.83■■□□□ 1.73
SREBF1-204ENST00000395756 ZNF777Q9ULD5 760 aaPredicted RBP25.82■■□□□ 1.72
SREBF1-204ENST00000395756 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
SREBF1-204ENST00000395756 HECW1Q76N89 1606 aa25.81■■□□□ 1.72
SREBF1-204ENST00000395756 SUPT6HQ7KZ85 1726 aaKnown RBP25.8■■□□□ 1.72
SREBF1-204ENST00000395756 CDK11AQ9UQ88 783 aaPredicted RBP25.8■■□□□ 1.72
SREBF1-204ENST00000395756 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
SREBF1-204ENST00000395756 MAGI1Q96QZ7 1491 aaPredicted RBP25.8■■□□□ 1.72
SREBF1-204ENST00000395756 CENPBP07199 599 aaPredicted RBP25.77■■□□□ 1.72
SREBF1-204ENST00000395756 PLB1Q6P1J6 1458 aa25.77■■□□□ 1.72
SREBF1-204ENST00000395756 KIAA0556O60303 1618 aa25.76■■□□□ 1.71
SREBF1-204ENST00000395756 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
SREBF1-204ENST00000395756 NUP153P49790 1475 aaKnown RBP25.74■■□□□ 1.71
SREBF1-204ENST00000395756 NAIPQ13075 1403 aa25.73■■□□□ 1.71
SREBF1-204ENST00000395756 HFM1A2PYH4 1435 aa25.73■■□□□ 1.71
SREBF1-204ENST00000395756 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
SREBF1-204ENST00000395756 PTPN23Q9H3S7 1636 aa25.72■■□□□ 1.71
SREBF1-204ENST00000395756 FOXD1Q16676 465 aa25.71■■□□□ 1.71
SREBF1-204ENST00000395756 CARMIL2Q6F5E8 1435 aa25.69■■□□□ 1.7
SREBF1-204ENST00000395756 CFDP1Q9UEE9 299 aaPredicted RBP25.68■■□□□ 1.7
SREBF1-204ENST00000395756 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
SREBF1-204ENST00000395756 TONSLQ96HA7 1378 aa25.65■■□□□ 1.7
SREBF1-204ENST00000395756 PPP1R15AO75807 674 aaPredicted RBP25.64■■□□□ 1.7
SREBF1-204ENST00000395756 PLEKHD1A6NEE1 506 aa25.62■■□□□ 1.69
SREBF1-204ENST00000395756 UACAQ9BZF9 1416 aa25.62■■□□□ 1.69
SREBF1-204ENST00000395756 NUP160Q12769 1436 aa25.62■■□□□ 1.69
SREBF1-204ENST00000395756 DDX10Q13206 875 aaKnown RBP25.61■■□□□ 1.69
SREBF1-204ENST00000395756 GTF3C3Q9Y5Q9 886 aa25.61■■□□□ 1.69
SREBF1-204ENST00000395756 RAPGEF6Q8TEU7 1601 aa25.6■■□□□ 1.69
SREBF1-204ENST00000395756 MIA2Q96PC5 1412 aa25.57■■□□□ 1.68
SREBF1-204ENST00000395756 MPHOSPH9Q99550 1183 aa25.56■■□□□ 1.68
SREBF1-204ENST00000395756 TCOF1Q13428 1488 aaKnown RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms