RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 BCL11AQ9H165 835 aa18.84■□□□□ 0.61
C15orf39-202ENST00000394987 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
C15orf39-202ENST00000394987 HIRIP3Q9BW71 556 aaPredicted RBP18.83■□□□□ 0.61
C15orf39-202ENST00000394987 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
C15orf39-202ENST00000394987 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
C15orf39-202ENST00000394987 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
C15orf39-202ENST00000394987 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
C15orf39-202ENST00000394987 BICRAQ9NZM4 1560 aa18.79■□□□□ 0.6
C15orf39-202ENST00000394987 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
C15orf39-202ENST00000394987 TONSLQ96HA7 1378 aa18.78■□□□□ 0.6
C15orf39-202ENST00000394987 SLC24A1O60721 1099 aa18.77■□□□□ 0.6
C15orf39-202ENST00000394987 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.59
C15orf39-202ENST00000394987 KDM2AQ9Y2K7 1162 aa18.75■□□□□ 0.59
C15orf39-202ENST00000394987 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
C15orf39-202ENST00000394987 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
C15orf39-202ENST00000394987 STAG3Q9UJ98 1225 aa18.73■□□□□ 0.59
C15orf39-202ENST00000394987 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
C15orf39-202ENST00000394987 NBR1Q14596 966 aa18.7■□□□□ 0.58
C15orf39-202ENST00000394987 RAPGEF2Q9Y4G8 1499 aa18.7■□□□□ 0.58
C15orf39-202ENST00000394987 SALL2Q9Y467 1007 aaPredicted RBP18.7■□□□□ 0.58
C15orf39-202ENST00000394987 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
C15orf39-202ENST00000394987 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
C15orf39-202ENST00000394987 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
C15orf39-202ENST00000394987 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
C15orf39-202ENST00000394987 PLEKHD1A6NEE1 506 aa18.62■□□□□ 0.57
C15orf39-202ENST00000394987 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
C15orf39-202ENST00000394987 RGL3Q3MIN7 710 aa18.58■□□□□ 0.56
C15orf39-202ENST00000394987 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
C15orf39-202ENST00000394987 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
C15orf39-202ENST00000394987 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
C15orf39-202ENST00000394987 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
C15orf39-202ENST00000394987 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
C15orf39-202ENST00000394987 CANXP27824 592 aaKnown RBP18.55■□□□□ 0.56
C15orf39-202ENST00000394987 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
C15orf39-202ENST00000394987 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
C15orf39-202ENST00000394987 NESP48681 1621 aa18.54■□□□□ 0.56
C15orf39-202ENST00000394987 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
C15orf39-202ENST00000394987 CFTRP13569 1480 aa18.53■□□□□ 0.56
C15orf39-202ENST00000394987 CFDP1Q9UEE9 299 aaPredicted RBP18.52■□□□□ 0.56
C15orf39-202ENST00000394987 NEFMP07197 916 aa18.51■□□□□ 0.55
C15orf39-202ENST00000394987 IGF1RP08069 1367 aa18.5■□□□□ 0.55
C15orf39-202ENST00000394987 ANP32EQ9BTT0 268 aa18.5■□□□□ 0.55
C15orf39-202ENST00000394987 PLEKHG5O94827 1062 aa18.49■□□□□ 0.55
C15orf39-202ENST00000394987 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
C15orf39-202ENST00000394987 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
C15orf39-202ENST00000394987 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
C15orf39-202ENST00000394987 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
C15orf39-202ENST00000394987 SIN3AQ96ST3 1273 aa18.45■□□□□ 0.54
C15orf39-202ENST00000394987 TMC1Q8TDI8 760 aa18.43■□□□□ 0.54
C15orf39-202ENST00000394987 ANP32AP39687 249 aaKnown RBP18.42■□□□□ 0.54
C15orf39-202ENST00000394987 ZBTB47Q9UFB7 747 aaPredicted RBP18.41■□□□□ 0.54
C15orf39-202ENST00000394987 RTN4Q9NQC3 1192 aaKnown RBP18.41■□□□□ 0.54
C15orf39-202ENST00000394987 MRS2Q9HD23 443 aa18.4■□□□□ 0.54
C15orf39-202ENST00000394987 ARXQ96QS3 562 aa18.39■□□□□ 0.53
C15orf39-202ENST00000394987 FMN1Q68DA7 1419 aa18.37■□□□□ 0.53
C15orf39-202ENST00000394987 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
C15orf39-202ENST00000394987 EIF4G2P78344 907 aaKnown RBP eCLIP18.36■□□□□ 0.53
C15orf39-202ENST00000394987 JPH4Q96JJ6 628 aa18.35■□□□□ 0.53
C15orf39-202ENST00000394987 AQRO60306 1485 aaKnown RBP eCLIP18.34■□□□□ 0.538e-7■■■■□ 19.3
C15orf39-202ENST00000394987 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.53
C15orf39-202ENST00000394987 CUX1P39880 1505 aa18.33■□□□□ 0.52
C15orf39-202ENST00000394987 CARMIL2Q6F5E8 1435 aa18.32■□□□□ 0.52
C15orf39-202ENST00000394987 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
C15orf39-202ENST00000394987 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
C15orf39-202ENST00000394987 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
C15orf39-202ENST00000394987 PPP1R15AO75807 674 aaPredicted RBP18.28■□□□□ 0.52
C15orf39-202ENST00000394987 TOP2BQ02880 1626 aa18.26■□□□□ 0.51
C15orf39-202ENST00000394987 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
C15orf39-202ENST00000394987 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
C15orf39-202ENST00000394987 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
C15orf39-202ENST00000394987 MLECQ14165 292 aa18.21■□□□□ 0.51
C15orf39-202ENST00000394987 ZBTB7CA1YPR0 619 aa18.21■□□□□ 0.51
C15orf39-202ENST00000394987 FOXD1Q16676 465 aa18.21■□□□□ 0.51
C15orf39-202ENST00000394987 C14orf37Q86TY3 774 aa18.2■□□□□ 0.5
C15orf39-202ENST00000394987 CARD11Q9BXL7 1154 aa18.2■□□□□ 0.5
C15orf39-202ENST00000394987 SETD5Q9C0A6 1442 aa18.19■□□□□ 0.5
C15orf39-202ENST00000394987 PRXQ9BXM0 1461 aa18.18■□□□□ 0.5
C15orf39-202ENST00000394987 RAB3GAP2Q9H2M9 1393 aa18.18■□□□□ 0.5
C15orf39-202ENST00000394987 KIF21BO75037 1637 aa18.17■□□□□ 0.5
C15orf39-202ENST00000394987 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
C15orf39-202ENST00000394987 A0A0G2JS52 829 aa18.15■□□□□ 0.5
C15orf39-202ENST00000394987 TRHP20396 242 aaPredicted RBP18.15■□□□□ 0.5
C15orf39-202ENST00000394987 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.5
C15orf39-202ENST00000394987 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
C15orf39-202ENST00000394987 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
C15orf39-202ENST00000394987 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
C15orf39-202ENST00000394987 GGT6Q6P531 493 aa18.11■□□□□ 0.49
C15orf39-202ENST00000394987 TNNT2P45379 298 aaPredicted RBP18.1■□□□□ 0.49
C15orf39-202ENST00000394987 ERICH3Q5RHP9 1530 aa18.1■□□□□ 0.49
C15orf39-202ENST00000394987 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
C15orf39-202ENST00000394987 NEUROD2Q15784 382 aa18.08■□□□□ 0.49
C15orf39-202ENST00000394987 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
C15orf39-202ENST00000394987 PTPRGP23470 1445 aa18.07■□□□□ 0.48
C15orf39-202ENST00000394987 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
C15orf39-202ENST00000394987 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
C15orf39-202ENST00000394987 RBM19Q9Y4C8 960 aaKnown RBP18.05■□□□□ 0.48
C15orf39-202ENST00000394987 TSHZ2Q9NRE2 1034 aa18.04■□□□□ 0.48
C15orf39-202ENST00000394987 CCDC18Q5T9S5 1454 aa18.03■□□□□ 0.48
C15orf39-202ENST00000394987 DHX57Q6P158 1386 aaKnown RBP18.03■□□□□ 0.48
C15orf39-202ENST00000394987 KNSTRNQ9Y448 316 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms