RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 NISCHQ9Y2I1 1504 aa25.34■■□□□ 1.65
C15orf39-202ENST00000394987 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
C15orf39-202ENST00000394987 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
C15orf39-202ENST00000394987 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
C15orf39-202ENST00000394987 EHMT2Q96KQ7 1210 aa22.49■■□□□ 1.19
C15orf39-202ENST00000394987 FAM9AQ8IZU1 332 aaPredicted RBP21.9■■□□□ 1.1
C15orf39-202ENST00000394987 TTBK1Q5TCY1 1321 aaPredicted RBP21.6■■□□□ 1.05
C15orf39-202ENST00000394987 ABCC9O60706 1549 aa21.58■■□□□ 1.04
C15orf39-202ENST00000394987 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
C15orf39-202ENST00000394987 RANGAP1P46060 587 aaPredicted RBP21.48■■□□□ 1.03
C15orf39-202ENST00000394987 APLP2Q06481 763 aa21.35■■□□□ 1.01
C15orf39-202ENST00000394987 TRIM41Q8WV44 630 aa21.31■■□□□ 1
C15orf39-202ENST00000394987 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
C15orf39-202ENST00000394987 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
C15orf39-202ENST00000394987 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.96
C15orf39-202ENST00000394987 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
C15orf39-202ENST00000394987 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
C15orf39-202ENST00000394987 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.96
C15orf39-202ENST00000394987 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
C15orf39-202ENST00000394987 HRCP23327 699 aa20.93■□□□□ 0.94
C15orf39-202ENST00000394987 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
C15orf39-202ENST00000394987 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
C15orf39-202ENST00000394987 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
C15orf39-202ENST00000394987 CCER1Q8TC90 406 aaPredicted RBP20.7■□□□□ 0.9
C15orf39-202ENST00000394987 YTHDC1Q96MU7 727 aaKnown RBP20.69■□□□□ 0.9
C15orf39-202ENST00000394987 MYT1Q01538 1121 aa20.6■□□□□ 0.89
C15orf39-202ENST00000394987 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.88
C15orf39-202ENST00000394987 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
C15orf39-202ENST00000394987 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
C15orf39-202ENST00000394987 ITGAEP38570 1179 aa20.43■□□□□ 0.86
C15orf39-202ENST00000394987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
C15orf39-202ENST00000394987 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
C15orf39-202ENST00000394987 RB1CC1Q8TDY2 1594 aa20.3■□□□□ 0.84
C15orf39-202ENST00000394987 NACADO15069 1562 aa20.26■□□□□ 0.83
C15orf39-202ENST00000394987 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
C15orf39-202ENST00000394987 ERICH6Q7L0X2 663 aa20.19■□□□□ 0.82
C15orf39-202ENST00000394987 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
C15orf39-202ENST00000394987 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
C15orf39-202ENST00000394987 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
C15orf39-202ENST00000394987 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
C15orf39-202ENST00000394987 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
C15orf39-202ENST00000394987 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
C15orf39-202ENST00000394987 GTF3C3Q9Y5Q9 886 aa19.9■□□□□ 0.78
C15orf39-202ENST00000394987 FBLN2P98095 1184 aa19.87■□□□□ 0.77
C15orf39-202ENST00000394987 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
C15orf39-202ENST00000394987 FAM50AQ14320 339 aaKnown RBP19.8■□□□□ 0.76
C15orf39-202ENST00000394987 NEFLP07196 543 aa19.77■□□□□ 0.76
C15orf39-202ENST00000394987 P3H3Q8IVL6 736 aa19.77■□□□□ 0.75
C15orf39-202ENST00000394987 ARID3CA6NKF2 412 aa19.76■□□□□ 0.75
C15orf39-202ENST00000394987 DIEXFQ68CQ4 756 aaKnown RBP19.75■□□□□ 0.75
C15orf39-202ENST00000394987 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
C15orf39-202ENST00000394987 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
C15orf39-202ENST00000394987 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
C15orf39-202ENST00000394987 BCANQ96GW7 911 aa19.61■□□□□ 0.73
C15orf39-202ENST00000394987 NEUROD1Q13562 356 aa19.6■□□□□ 0.73
C15orf39-202ENST00000394987 TRIM52Q96A61 297 aa19.6■□□□□ 0.73
C15orf39-202ENST00000394987 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
C15orf39-202ENST00000394987 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
C15orf39-202ENST00000394987 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
C15orf39-202ENST00000394987 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
C15orf39-202ENST00000394987 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
C15orf39-202ENST00000394987 WIZO95785 1651 aa19.43■□□□□ 0.7
C15orf39-202ENST00000394987 CCDC88BA6NC98 1476 aa19.4■□□□□ 0.7
C15orf39-202ENST00000394987 ZNF777Q9ULD5 760 aaPredicted RBP19.35■□□□□ 0.69
C15orf39-202ENST00000394987 SMARCA2P51531 1590 aa19.25■□□□□ 0.67
C15orf39-202ENST00000394987 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
C15orf39-202ENST00000394987 ZNF316A6NFI3 1004 aaPredicted RBP19.24■□□□□ 0.67
C15orf39-202ENST00000394987 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
C15orf39-202ENST00000394987 SOGA1O94964 1423 aa19.22■□□□□ 0.67
C15orf39-202ENST00000394987 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
C15orf39-202ENST00000394987 TOP2AP11388 1531 aaKnown RBP19.21■□□□□ 0.67
C15orf39-202ENST00000394987 EEA1Q15075 1411 aa19.21■□□□□ 0.67
C15orf39-202ENST00000394987 CLIP1P30622 1438 aa19.18■□□□□ 0.66
C15orf39-202ENST00000394987 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
C15orf39-202ENST00000394987 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
C15orf39-202ENST00000394987 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
C15orf39-202ENST00000394987 CHIC2Q9UKJ5 165 aa19.08■□□□□ 0.65
C15orf39-202ENST00000394987 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
C15orf39-202ENST00000394987 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
C15orf39-202ENST00000394987 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
C15orf39-202ENST00000394987 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
C15orf39-202ENST00000394987 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
C15orf39-202ENST00000394987 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
C15orf39-202ENST00000394987 DAXXQ9UER7 740 aaPredicted RBP19■□□□□ 0.63
C15orf39-202ENST00000394987 CUX2O14529 1486 aa19■□□□□ 0.63
C15orf39-202ENST00000394987 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
C15orf39-202ENST00000394987 ANP32CO43423 234 aa18.97■□□□□ 0.63
C15orf39-202ENST00000394987 ERCC6Q03468 1493 aa18.96■□□□□ 0.63
C15orf39-202ENST00000394987 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
C15orf39-202ENST00000394987 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
C15orf39-202ENST00000394987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.62
C15orf39-202ENST00000394987 NPM1P06748 294 aaKnown RBP eCLIP18.88■□□□□ 0.61
C15orf39-202ENST00000394987 MIER1Q8N108 512 aa18.88■□□□□ 0.61
C15orf39-202ENST00000394987 MTUS2Q5JR59 1369 aa18.88■□□□□ 0.61
C15orf39-202ENST00000394987 TDRD9Q8NDG6 1382 aaKnown RBP18.87■□□□□ 0.61
C15orf39-202ENST00000394987 EIF4G1Q04637 1599 aaKnown RBP18.87■□□□□ 0.61
C15orf39-202ENST00000394987 PDS5BQ9NTI5 1447 aa18.86■□□□□ 0.61
C15orf39-202ENST00000394987 FKBP8Q14318 412 aa18.86■□□□□ 0.61
C15orf39-202ENST00000394987 RUSC2Q8N2Y8 1516 aa18.86■□□□□ 0.61
C15orf39-202ENST00000394987 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms