RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 ANP32CO43423 234 aa20.17■□□□□ 0.82
VSIR-201ENST00000394957 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
VSIR-201ENST00000394957 TDRD9Q8NDG6 1382 aaKnown RBP20.15■□□□□ 0.82
VSIR-201ENST00000394957 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
VSIR-201ENST00000394957 KCNH8Q96L42 1107 aa20.1■□□□□ 0.81
VSIR-201ENST00000394957 CARMIL2Q6F5E8 1435 aa20.05■□□□□ 0.8
VSIR-201ENST00000394957 RTL5Q5HYW3 569 aaPredicted RBP20.05■□□□□ 0.8
VSIR-201ENST00000394957 FHAD1B1AJZ9 1412 aa20.03■□□□□ 0.8
VSIR-201ENST00000394957 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.8
VSIR-201ENST00000394957 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
VSIR-201ENST00000394957 STAG3Q9UJ98 1225 aa19.97■□□□□ 0.79
VSIR-201ENST00000394957 BICRAQ9NZM4 1560 aa19.97■□□□□ 0.79
VSIR-201ENST00000394957 CHIC2Q9UKJ5 165 aa19.95■□□□□ 0.78
VSIR-201ENST00000394957 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
VSIR-201ENST00000394957 ERICH6BQ5W0A0 696 aa19.89■□□□□ 0.77
VSIR-201ENST00000394957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
VSIR-201ENST00000394957 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
VSIR-201ENST00000394957 CHGAP10645 457 aaKnown RBP19.87■□□□□ 0.77
VSIR-201ENST00000394957 CFTRP13569 1480 aa19.86■□□□□ 0.77
VSIR-201ENST00000394957 FMN1Q68DA7 1419 aa19.81■□□□□ 0.76
VSIR-201ENST00000394957 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
VSIR-201ENST00000394957 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
VSIR-201ENST00000394957 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
VSIR-201ENST00000394957 CCNB3Q8WWL7 1395 aa19.79■□□□□ 0.76
VSIR-201ENST00000394957 TRHP20396 242 aaPredicted RBP19.79■□□□□ 0.76
VSIR-201ENST00000394957 PODXL2Q9NZ53 605 aa19.79■□□□□ 0.76
VSIR-201ENST00000394957 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
VSIR-201ENST00000394957 TONSLQ96HA7 1378 aa19.79■□□□□ 0.76
VSIR-201ENST00000394957 DDX10Q13206 875 aaKnown RBP19.78■□□□□ 0.76
VSIR-201ENST00000394957 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
VSIR-201ENST00000394957 MRC2Q9UBG0 1479 aa19.74■□□□□ 0.75
VSIR-201ENST00000394957 CANXP27824 592 aaKnown RBP19.74■□□□□ 0.75
VSIR-201ENST00000394957 UBE2Q2Q8WVN8 375 aa19.74■□□□□ 0.75
VSIR-201ENST00000394957 PKNOX2Q96KN3 472 aa19.73■□□□□ 0.75
VSIR-201ENST00000394957 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
VSIR-201ENST00000394957 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
VSIR-201ENST00000394957 ZBTB47Q9UFB7 747 aaPredicted RBP19.7■□□□□ 0.74
VSIR-201ENST00000394957 VPS8Q8N3P4 1428 aa19.7■□□□□ 0.74
VSIR-201ENST00000394957 NESP48681 1621 aa19.7■□□□□ 0.74
VSIR-201ENST00000394957 ANO8Q9HCE9 1232 aaPredicted RBP19.68■□□□□ 0.74
VSIR-201ENST00000394957 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
VSIR-201ENST00000394957 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
VSIR-201ENST00000394957 HNRNPUQ00839 825 aaKnown RBP eCLIP19.66■□□□□ 0.74
VSIR-201ENST00000394957 FKBP8Q14318 412 aa19.66■□□□□ 0.74
VSIR-201ENST00000394957 NEFMP07197 916 aa19.64■□□□□ 0.73
VSIR-201ENST00000394957 FAM9BQ8IZU0 186 aa19.64■□□□□ 0.73
VSIR-201ENST00000394957 IGF1RP08069 1367 aa19.63■□□□□ 0.73
VSIR-201ENST00000394957 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
VSIR-201ENST00000394957 EFCAB2Q5VUJ9 269 aa19.63■□□□□ 0.73
VSIR-201ENST00000394957 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
VSIR-201ENST00000394957 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
VSIR-201ENST00000394957 DEKP35659 375 aaKnown RBP19.6■□□□□ 0.73
VSIR-201ENST00000394957 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
VSIR-201ENST00000394957 PTPRGP23470 1445 aa19.6■□□□□ 0.73
VSIR-201ENST00000394957 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
VSIR-201ENST00000394957 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.733e-9■■■■■ 46.7
VSIR-201ENST00000394957 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.73
VSIR-201ENST00000394957 TSHZ2Q9NRE2 1034 aa19.56■□□□□ 0.72
VSIR-201ENST00000394957 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
VSIR-201ENST00000394957 PPP1R15AO75807 674 aaPredicted RBP19.55■□□□□ 0.72
VSIR-201ENST00000394957 NPM2Q86SE8 214 aaKnown RBP19.55■□□□□ 0.72
VSIR-201ENST00000394957 FHOD3Q2V2M9 1422 aa19.55■□□□□ 0.72
VSIR-201ENST00000394957 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
VSIR-201ENST00000394957 ARHGAP35Q9NRY4 1499 aa19.54■□□□□ 0.72
VSIR-201ENST00000394957 MIER1Q8N108 512 aa19.51■□□□□ 0.71
VSIR-201ENST00000394957 ANP32AP39687 249 aaKnown RBP19.51■□□□□ 0.71
VSIR-201ENST00000394957 KDM2AQ9Y2K7 1162 aa19.51■□□□□ 0.71
VSIR-201ENST00000394957 KANK1Q14678 1352 aa19.51■□□□□ 0.71
VSIR-201ENST00000394957 CYB5RLQ6IPT4 315 aa19.51■□□□□ 0.71
VSIR-201ENST00000394957 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
VSIR-201ENST00000394957 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
VSIR-201ENST00000394957 CCDC18Q5T9S5 1454 aa19.48■□□□□ 0.71
VSIR-201ENST00000394957 RSPH4AQ5TD94 716 aa19.48■□□□□ 0.71
VSIR-201ENST00000394957 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
VSIR-201ENST00000394957 TMC1Q8TDI8 760 aa19.47■□□□□ 0.71
VSIR-201ENST00000394957 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
VSIR-201ENST00000394957 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
VSIR-201ENST00000394957 MRS2Q9HD23 443 aa19.43■□□□□ 0.7
VSIR-201ENST00000394957 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.42■□□□□ 0.7
VSIR-201ENST00000394957 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
VSIR-201ENST00000394957 KANK4Q5T7N3 995 aaPredicted RBP19.4■□□□□ 0.7
VSIR-201ENST00000394957 CUX1P39880 1505 aa19.39■□□□□ 0.69
VSIR-201ENST00000394957 HDGFP51858 240 aaKnown RBP19.37■□□□□ 0.69
VSIR-201ENST00000394957 RGL3Q3MIN7 710 aa19.37■□□□□ 0.69
VSIR-201ENST00000394957 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
VSIR-201ENST00000394957 ANKRD30AQ9BXX3 1397 aa19.36■□□□□ 0.69
VSIR-201ENST00000394957 MLECQ14165 292 aa19.35■□□□□ 0.69
VSIR-201ENST00000394957 IRX6P78412 446 aaPredicted RBP19.35■□□□□ 0.69
VSIR-201ENST00000394957 GGT6Q6P531 493 aa19.33■□□□□ 0.69
VSIR-201ENST00000394957 SPAG9O60271 1321 aaKnown RBP19.32■□□□□ 0.68
VSIR-201ENST00000394957 EIF4G2P78344 907 aaKnown RBP eCLIP19.32■□□□□ 0.68
VSIR-201ENST00000394957 RTN4Q9NQC3 1192 aaKnown RBP19.32■□□□□ 0.68
VSIR-201ENST00000394957 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
VSIR-201ENST00000394957 NBR1Q14596 966 aa19.3■□□□□ 0.68
VSIR-201ENST00000394957 RBM19Q9Y4C8 960 aaKnown RBP19.3■□□□□ 0.68
VSIR-201ENST00000394957 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
VSIR-201ENST00000394957 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
VSIR-201ENST00000394957 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
VSIR-201ENST00000394957 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
VSIR-201ENST00000394957 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms