RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 NISCHQ9Y2I1 1504 aa26.97■■□□□ 1.91
VSIR-201ENST00000394957 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
VSIR-201ENST00000394957 PELP1Q8IZL8 1130 aaKnown RBP24.62■■□□□ 1.53
VSIR-201ENST00000394957 MYT1Q01538 1121 aa24.53■■□□□ 1.52
VSIR-201ENST00000394957 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
VSIR-201ENST00000394957 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
VSIR-201ENST00000394957 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
VSIR-201ENST00000394957 ABCC9O60706 1549 aa23.27■■□□□ 1.32
VSIR-201ENST00000394957 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
VSIR-201ENST00000394957 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
VSIR-201ENST00000394957 FAM9AQ8IZU1 332 aaPredicted RBP22.73■■□□□ 1.23
VSIR-201ENST00000394957 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
VSIR-201ENST00000394957 APLP2Q06481 763 aa22.54■■□□□ 1.2
VSIR-201ENST00000394957 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
VSIR-201ENST00000394957 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
VSIR-201ENST00000394957 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
VSIR-201ENST00000394957 ZCCHC6Q5VYS8 1495 aaKnown RBP22.35■■□□□ 1.17
VSIR-201ENST00000394957 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
VSIR-201ENST00000394957 HRCP23327 699 aa22.2■■□□□ 1.14
VSIR-201ENST00000394957 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
VSIR-201ENST00000394957 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
VSIR-201ENST00000394957 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
VSIR-201ENST00000394957 NACADO15069 1562 aa22.03■■□□□ 1.12
VSIR-201ENST00000394957 CCER1Q8TC90 406 aaPredicted RBP21.94■■□□□ 1.1
VSIR-201ENST00000394957 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
VSIR-201ENST00000394957 ATP1B4Q9UN42 357 aaPredicted RBP21.89■■□□□ 1.1
VSIR-201ENST00000394957 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
VSIR-201ENST00000394957 PPARGC1BQ86YN6 1023 aaKnown RBP21.76■■□□□ 1.07
VSIR-201ENST00000394957 DCAF1Q9Y4B6 1507 aa21.74■■□□□ 1.07
VSIR-201ENST00000394957 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
VSIR-201ENST00000394957 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
VSIR-201ENST00000394957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.45■■□□□ 1.02
VSIR-201ENST00000394957 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.02
VSIR-201ENST00000394957 YTHDC1Q96MU7 727 aaKnown RBP21.45■■□□□ 1.02
VSIR-201ENST00000394957 TRIM26Q12899 539 aaPredicted RBP21.43■■□□□ 1.02
VSIR-201ENST00000394957 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
VSIR-201ENST00000394957 BCL11AQ9H165 835 aa21.39■■□□□ 1.01
VSIR-201ENST00000394957 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
VSIR-201ENST00000394957 FBLN2P98095 1184 aa21.29■■□□□ 1
VSIR-201ENST00000394957 ITGAEP38570 1179 aa21.28■■□□□ 1
VSIR-201ENST00000394957 PRKCSHP14314 528 aaPredicted RBP21.25■□□□□ 0.99
VSIR-201ENST00000394957 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
VSIR-201ENST00000394957 BAZ1AQ9NRL2 1556 aaPredicted RBP21.21■□□□□ 0.99
VSIR-201ENST00000394957 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
VSIR-201ENST00000394957 NEFLP07196 543 aa21.19■□□□□ 0.98
VSIR-201ENST00000394957 MYT1LQ9UL68 1186 aa21.18■□□□□ 0.98
VSIR-201ENST00000394957 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
VSIR-201ENST00000394957 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
VSIR-201ENST00000394957 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
VSIR-201ENST00000394957 GTF3C3Q9Y5Q9 886 aa21.05■□□□□ 0.96
VSIR-201ENST00000394957 CECR2Q9BXF3 1484 aa20.98■□□□□ 0.95
VSIR-201ENST00000394957 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
VSIR-201ENST00000394957 SMARCA2P51531 1590 aa20.9■□□□□ 0.94
VSIR-201ENST00000394957 CNGB1Q14028 1251 aaPredicted RBP20.88■□□□□ 0.93
VSIR-201ENST00000394957 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
VSIR-201ENST00000394957 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
VSIR-201ENST00000394957 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
VSIR-201ENST00000394957 ANP32EQ9BTT0 268 aa20.76■□□□□ 0.91
VSIR-201ENST00000394957 P3H3Q8IVL6 736 aa20.76■□□□□ 0.91
VSIR-201ENST00000394957 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
VSIR-201ENST00000394957 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
VSIR-201ENST00000394957 NPM1P06748 294 aaKnown RBP eCLIP20.73■□□□□ 0.91
VSIR-201ENST00000394957 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
VSIR-201ENST00000394957 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
VSIR-201ENST00000394957 EEA1Q15075 1411 aa20.68■□□□□ 0.9
VSIR-201ENST00000394957 PDS5BQ9NTI5 1447 aa20.67■□□□□ 0.9
VSIR-201ENST00000394957 KIF27Q86VH2 1401 aa20.6■□□□□ 0.89
VSIR-201ENST00000394957 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
VSIR-201ENST00000394957 EIF5BO60841 1220 aaKnown RBP20.57■□□□□ 0.88
VSIR-201ENST00000394957 ARID3CA6NKF2 412 aa20.56■□□□□ 0.88
VSIR-201ENST00000394957 CCDC88BA6NC98 1476 aa20.53■□□□□ 0.88
VSIR-201ENST00000394957 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
VSIR-201ENST00000394957 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.88
VSIR-201ENST00000394957 SMARCA4P51532 1647 aa20.51■□□□□ 0.87
VSIR-201ENST00000394957 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
VSIR-201ENST00000394957 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
VSIR-201ENST00000394957 SLC4A1APQ9BWU0 796 aaKnown RBP20.45■□□□□ 0.86
VSIR-201ENST00000394957 DAXXQ9UER7 740 aaPredicted RBP20.45■□□□□ 0.86
VSIR-201ENST00000394957 ZNF777Q9ULD5 760 aaPredicted RBP20.41■□□□□ 0.86
VSIR-201ENST00000394957 WIZO95785 1651 aa20.4■□□□□ 0.86
VSIR-201ENST00000394957 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
VSIR-201ENST00000394957 CLIP1P30622 1438 aa20.34■□□□□ 0.85
VSIR-201ENST00000394957 CUX2O14529 1486 aa20.33■□□□□ 0.85
VSIR-201ENST00000394957 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
VSIR-201ENST00000394957 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
VSIR-201ENST00000394957 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
VSIR-201ENST00000394957 ZNF326Q5BKZ1 582 aaKnown RBP20.31■□□□□ 0.84
VSIR-201ENST00000394957 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
VSIR-201ENST00000394957 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
VSIR-201ENST00000394957 SOGA1O94964 1423 aa20.28■□□□□ 0.84
VSIR-201ENST00000394957 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
VSIR-201ENST00000394957 GLIPR1L2Q4G1C9 344 aa20.26■□□□□ 0.83
VSIR-201ENST00000394957 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
VSIR-201ENST00000394957 PLEKHD1A6NEE1 506 aa20.24■□□□□ 0.83
VSIR-201ENST00000394957 BCANQ96GW7 911 aa20.24■□□□□ 0.83
VSIR-201ENST00000394957 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
VSIR-201ENST00000394957 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
VSIR-201ENST00000394957 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
VSIR-201ENST00000394957 TSPY4P0CV99 314 aa20.18■□□□□ 0.82
VSIR-201ENST00000394957 TSPY10P0CW01 314 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms